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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5ifl:A (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    2 5ifl:A (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    3 5ifl:B (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    4 5ifl:B (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    5 5ifl:C (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    6 5ifl:C (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    7 5ifl:D (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    8 5ifl:D (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    9 5ifl:E (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    10 5ifl:E (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    11 5ifl:F (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    12 5ifl:F (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    13 5ifl:G (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    14 5ifl:G (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    15 5ifl:H (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    16 5ifl:H (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    17 5ifl:I (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    18 5ifl:I (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    19 5ifl:J (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    20 5ifl:J (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    21 5ifl:K (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    22 5ifl:K (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    23 5ifl:L (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    24 5ifl:L (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    25 5ifl:M (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    26 5ifl:M (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    27 5ifl:N (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    28 5ifl:N (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    29 5ifl:O (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    30 5ifl:O (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    31 5ifl:P (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    32 5ifl:P (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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