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BioLiP
Download all results in tab-seperated text for 18 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4cqk:A (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    2 4cqk:B (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    3 4cqk:B (1.6) BS02 PIO ? GO:0006952 ... Q8GTM0 24692446
    4 4cqk:C (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    5 4cqk:C (1.6) BS02 PIO ? GO:0006952 ... Q8GTM0 24692446
    6 4cqk:D (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    7 4cqk:D (1.6) BS02 PIO ? GO:0006952 ... Q8GTM0 24692446
    8 4cqk:E (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    9 4cqk:F (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    10 4cqk:G (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    11 4cqk:H (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    12 4cqk:I (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    13 4cqk:J (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    14 4cqk:K (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    15 4cqk:L (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    16 4cqk:M (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    17 4cqk:M (1.6) BS02 PIO ? GO:0006952 ... Q8GTM0 24692446
    18 4cqk:N (1.6) BS01 PIO ? GO:0006952 ... Q8GTM0 24692446
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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