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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    888401 8wm6:c (2.7) BS08 CLA N/A N/A N/A 38734819
    888402 8wm6:c (2.7) BS09 CLA N/A N/A N/A 38734819
    888403 8wm6:c (2.7) BS10 KC2 N/A N/A N/A 38734819
    888404 8wm6:c (2.7) BS11 CLA N/A N/A N/A 38734819
    888405 8wm6:c (2.7) BS12 CLA N/A N/A N/A 38734819
    888406 8wm6:c (2.7) BS13 II0 N/A N/A N/A 38734819
    888407 8wm6:c (2.7) BS14 II0 N/A N/A N/A 38734819
    888408 8wm6:c (2.7) BS15 II0 N/A N/A N/A 38734819
    888409 8wm6:c (2.7) BS16 IHT N/A N/A N/A 38734819
    888410 8wm6:c (2.7) BS17 II0 N/A N/A N/A 38734819
    888411 8wm6:d (2.7) BS01 CLA N/A N/A N/A 38734819
    888412 8wm6:d (2.7) BS02 IHT N/A N/A N/A 38734819
    888413 8wm6:d (2.7) BS03 CLA N/A N/A N/A 38734819
    888414 8wm6:d (2.7) BS04 CLA N/A N/A N/A 38734819
    888415 8wm6:d (2.7) BS05 CLA N/A N/A N/A 38734819
    888416 8wm6:d (2.7) BS06 CLA N/A N/A N/A 38734819
    888417 8wm6:d (2.7) BS07 CLA N/A N/A N/A 38734819
    888418 8wm6:d (2.7) BS08 CLA N/A N/A N/A 38734819
    888419 8wm6:d (2.7) BS09 CLA N/A N/A N/A 38734819
    888420 8wm6:d (2.7) BS10 CLA N/A N/A N/A 38734819
    888421 8wm6:d (2.7) BS11 CLA N/A N/A N/A 38734819
    888422 8wm6:d (2.7) BS12 KC2 N/A N/A N/A 38734819
    888423 8wm6:d (2.7) BS13 KC2 N/A N/A N/A 38734819
    888424 8wm6:d (2.7) BS14 CLA N/A N/A N/A 38734819
    888425 8wm6:d (2.7) BS15 II0 N/A N/A N/A 38734819
    888426 8wm6:d (2.7) BS16 II0 N/A N/A N/A 38734819
    888427 8wm6:d (2.7) BS17 II0 N/A N/A N/A 38734819
    888428 8wm6:d (2.7) BS18 II0 N/A N/A N/A 38734819
    888429 8wm6:e (2.7) BS01 CLA N/A N/A N/A 38734819
    888430 8wm6:e (2.7) BS02 CLA N/A N/A N/A 38734819
    888431 8wm6:e (2.7) BS03 CLA N/A N/A N/A 38734819
    888432 8wm6:e (2.7) BS04 CLA N/A N/A N/A 38734819
    888433 8wm6:e (2.7) BS05 CLA N/A N/A N/A 38734819
    888434 8wm6:e (2.7) BS06 CLA N/A N/A N/A 38734819
    888435 8wm6:e (2.7) BS07 CLA N/A N/A N/A 38734819
    888436 8wm6:e (2.7) BS08 CLA N/A N/A N/A 38734819
    888437 8wm6:e (2.7) BS09 KC2 N/A N/A N/A 38734819
    888438 8wm6:e (2.7) BS10 CLA N/A N/A N/A 38734819
    888439 8wm6:e (2.7) BS11 CLA N/A N/A N/A 38734819
    888440 8wm6:e (2.7) BS12 II0 N/A N/A N/A 38734819
    888441 8wm6:e (2.7) BS13 II0 N/A N/A N/A 38734819
    888442 8wm6:e (2.7) BS14 II0 N/A N/A N/A 38734819
    888443 8wm6:e (2.7) BS15 WVN N/A N/A N/A 38734819
    888444 8wm6:e (2.7) BS16 II0 N/A N/A N/A 38734819
    888445 8wm6:f (2.7) BS01 CLA N/A N/A N/A 38734819
    888446 8wm6:f (2.7) BS02 CLA N/A N/A N/A 38734819
    888447 8wm6:f (2.7) BS03 CLA N/A N/A N/A 38734819
    888448 8wm6:f (2.7) BS04 CLA N/A N/A N/A 38734819
    888449 8wm6:f (2.7) BS05 CLA N/A N/A N/A 38734819
    888450 8wm6:f (2.7) BS06 CLA N/A N/A N/A 38734819
    888451 8wm6:f (2.7) BS07 CLA N/A N/A N/A 38734819
    888452 8wm6:f (2.7) BS08 CLA N/A N/A N/A 38734819
    888453 8wm6:f (2.7) BS09 CLA N/A N/A N/A 38734819
    888454 8wm6:f (2.7) BS10 KC2 N/A N/A N/A 38734819
    888455 8wm6:f (2.7) BS11 CLA N/A N/A N/A 38734819
    888456 8wm6:f (2.7) BS12 CLA N/A N/A N/A 38734819
    888457 8wm6:f (2.7) BS13 II0 N/A N/A N/A 38734819
    888458 8wm6:f (2.7) BS14 II0 N/A N/A N/A 38734819
    888459 8wm6:f (2.7) BS15 II0 N/A N/A N/A 38734819
    888460 8wm6:f (2.7) BS16 IHT N/A N/A N/A 38734819
    888461 8wm6:f (2.7) BS17 II0 N/A N/A N/A 38734819
    888462 8wm6:g (2.7) BS01 CLA N/A N/A N/A 38734819
    888463 8wm6:g (2.7) BS02 CLA N/A N/A N/A 38734819
    888464 8wm6:g (2.7) BS03 CLA N/A N/A N/A 38734819
    888465 8wm6:g (2.7) BS04 II0 N/A N/A N/A 38734819
    888466 8wm6:g (2.7) BS05 CLA N/A N/A N/A 38734819
    888467 8wm6:g (2.7) BS06 CLA N/A N/A N/A 38734819
    888468 8wm6:g (2.7) BS07 CLA N/A N/A N/A 38734819
    888469 8wm6:g (2.7) BS08 CLA N/A N/A N/A 38734819
    888470 8wm6:g (2.7) BS09 CLA N/A N/A N/A 38734819
    888471 8wm6:g (2.7) BS10 CLA N/A N/A N/A 38734819
    888472 8wm6:g (2.7) BS11 CLA N/A N/A N/A 38734819
    888473 8wm6:g (2.7) BS12 CLA N/A N/A N/A 38734819
    888474 8wm6:g (2.7) BS13 CLA N/A N/A N/A 38734819
    888475 8wm6:g (2.7) BS14 CLA N/A N/A N/A 38734819
    888476 8wm6:g (2.7) BS15 KC2 N/A N/A N/A 38734819
    888477 8wm6:g (2.7) BS16 KC2 N/A N/A N/A 38734819
    888478 8wm6:g (2.7) BS17 KC2 N/A N/A N/A 38734819
    888479 8wm6:g (2.7) BS18 CLA N/A N/A N/A 38734819
    888480 8wm6:g (2.7) BS19 II0 N/A N/A N/A 38734819
    888481 8wm6:g (2.7) BS20 II0 N/A N/A N/A 38734819
    888482 8wm6:g (2.7) BS21 II0 N/A N/A N/A 38734819
    888483 8wm6:g (2.7) BS22 IHT N/A N/A N/A 38734819
    888484 8wm6:g (2.7) BS23 II0 N/A N/A N/A 38734819
    888485 8wm6:g (2.7) BS24 CLA N/A N/A N/A 38734819
    888486 8wm6:h (2.7) BS01 CLA N/A N/A N/A 38734819
    888487 8wm6:h (2.7) BS02 CLA N/A N/A N/A 38734819
    888488 8wm6:h (2.7) BS03 CLA N/A N/A N/A 38734819
    888489 8wm6:h (2.7) BS04 CLA N/A N/A N/A 38734819
    888490 8wm6:h (2.7) BS05 CLA N/A N/A N/A 38734819
    888491 8wm6:h (2.7) BS06 CLA N/A N/A N/A 38734819
    888492 8wm6:h (2.7) BS07 CLA N/A N/A N/A 38734819
    888493 8wm6:h (2.7) BS08 WVN N/A N/A N/A 38734819
    888494 8wm6:h (2.7) BS09 II0 N/A N/A N/A 38734819
    888495 8wm6:h (2.7) BS10 II0 N/A N/A N/A 38734819
    888496 8wm6:h (2.7) BS11 II0 N/A N/A N/A 38734819
    888497 8wm6:h (2.7) BS12 CLA N/A N/A N/A 38734819
    888498 8wm6:i (2.7) BS01 CLA N/A N/A N/A 38734819
    888499 8wm6:i (2.7) BS02 CLA N/A N/A N/A 38734819
    888500 8wm6:i (2.7) BS03 CLA N/A N/A N/A 38734819
    888501 8wm6:i (2.7) BS04 CLA N/A N/A N/A 38734819
    888502 8wm6:i (2.7) BS05 CLA N/A N/A N/A 38734819
    888503 8wm6:i (2.7) BS06 CLA N/A N/A N/A 38734819
    888504 8wm6:i (2.7) BS07 CLA N/A N/A N/A 38734819
    888505 8wm6:i (2.7) BS08 CLA N/A N/A N/A 38734819
    888506 8wm6:i (2.7) BS09 KC2 N/A N/A N/A 38734819
    888507 8wm6:i (2.7) BS10 CLA N/A N/A N/A 38734819
    888508 8wm6:i (2.7) BS11 CLA N/A N/A N/A 38734819
    888509 8wm6:i (2.7) BS12 II0 N/A N/A N/A 38734819
    888510 8wm6:i (2.7) BS13 II0 N/A N/A N/A 38734819
    888511 8wm6:i (2.7) BS14 II0 N/A N/A N/A 38734819
    888512 8wm6:i (2.7) BS15 WVN N/A N/A N/A 38734819
    888513 8wm6:i (2.7) BS16 II0 N/A N/A N/A 38734819
    888514 8wm6:i (2.7) BS17 KC2 N/A N/A N/A 38734819
    888515 8wm6:i (2.7) BS18 II0 N/A N/A N/A 38734819
    888516 8wm6:i (2.7) BS19 CLA N/A N/A N/A 38734819
    888517 8wm6:i (2.7) BS20 CLA N/A N/A N/A 38734819
    888518 8wm6:j (2.7) BS01 II0 N/A N/A N/A 38734819
    888519 8wm6:j (2.7) BS02 CLA N/A N/A N/A 38734819
    888520 8wm6:j (2.7) BS03 WVN N/A N/A N/A 38734819
    888521 8wm6:j (2.7) BS04 II0 N/A N/A N/A 38734819
    888522 8wm6:j (2.7) BS05 CLA N/A N/A N/A 38734819
    888523 8wm6:j (2.7) BS06 CLA N/A N/A N/A 38734819
    888524 8wm6:j (2.7) BS07 CLA N/A N/A N/A 38734819
    888525 8wm6:j (2.7) BS08 CLA N/A N/A N/A 38734819
    888526 8wm6:j (2.7) BS09 CLA N/A N/A N/A 38734819
    888527 8wm6:j (2.7) BS10 CLA N/A N/A N/A 38734819
    888528 8wm6:j (2.7) BS11 CLA N/A N/A N/A 38734819
    888529 8wm6:j (2.7) BS12 CLA N/A N/A N/A 38734819
    888530 8wm6:j (2.7) BS13 CLA N/A N/A N/A 38734819
    888531 8wm6:j (2.7) BS14 CLA N/A N/A N/A 38734819
    888532 8wm6:j (2.7) BS15 KC2 N/A N/A N/A 38734819
    888533 8wm6:j (2.7) BS16 CLA N/A N/A N/A 38734819
    888534 8wm6:j (2.7) BS17 CLA N/A N/A N/A 38734819
    888535 8wm6:j (2.7) BS18 II0 N/A N/A N/A 38734819
    888536 8wm6:j (2.7) BS19 II0 N/A N/A N/A 38734819
    888537 8wm6:j (2.7) BS20 IHT N/A N/A N/A 38734819
    888538 8wm6:k (2.7) BS01 CLA N/A N/A N/A 38734819
    888539 8wm6:k (2.7) BS02 CLA N/A N/A N/A 38734819
    888540 8wm6:k (2.7) BS03 CLA N/A N/A N/A 38734819
    888541 8wm6:k (2.7) BS04 CLA N/A N/A N/A 38734819
    888542 8wm6:k (2.7) BS05 CLA N/A N/A N/A 38734819
    888543 8wm6:k (2.7) BS06 CLA N/A N/A N/A 38734819
    888544 8wm6:k (2.7) BS07 CLA N/A N/A N/A 38734819
    888545 8wm6:k (2.7) BS08 CLA N/A N/A N/A 38734819
    888546 8wm6:k (2.7) BS09 CLA N/A N/A N/A 38734819
    888547 8wm6:k (2.7) BS10 CLA N/A N/A N/A 38734819
    888548 8wm6:k (2.7) BS11 KC2 N/A N/A N/A 38734819
    888549 8wm6:k (2.7) BS12 KC2 N/A N/A N/A 38734819
    888550 8wm6:k (2.7) BS13 KC2 N/A N/A N/A 38734819
    888551 8wm6:k (2.7) BS14 CLA N/A N/A N/A 38734819
    888552 8wm6:k (2.7) BS15 II0 N/A N/A N/A 38734819
    888553 8wm6:k (2.7) BS16 II0 N/A N/A N/A 38734819
    888554 8wm6:k (2.7) BS17 II0 N/A N/A N/A 38734819
    888555 8wm6:k (2.7) BS18 IHT N/A N/A N/A 38734819
    888556 8wm6:k (2.7) BS19 II0 N/A N/A N/A 38734819
    888557 8wm6:k (2.7) BS20 II0 N/A N/A N/A 38734819
    888558 8wm6:k (2.7) BS21 CLA N/A N/A N/A 38734819
    888559 8wm6:l (2.7) BS01 CLA N/A N/A N/A 38734819
    888560 8wm6:l (2.7) BS02 CLA N/A N/A N/A 38734819
    888561 8wm6:l (2.7) BS03 CLA N/A N/A N/A 38734819
    888562 8wm6:l (2.7) BS04 WVN N/A N/A N/A 38734819
    888563 8wm6:l (2.7) BS05 CLA N/A N/A N/A 38734819
    888564 8wm6:l (2.7) BS06 CLA N/A N/A N/A 38734819
    888565 8wm6:l (2.7) BS07 CLA N/A N/A N/A 38734819
    888566 8wm6:l (2.7) BS08 CLA N/A N/A N/A 38734819
    888567 8wm6:l (2.7) BS09 CLA N/A N/A N/A 38734819
    888568 8wm6:l (2.7) BS10 CLA N/A N/A N/A 38734819
    888569 8wm6:l (2.7) BS11 CLA N/A N/A N/A 38734819
    888570 8wm6:l (2.7) BS12 CLA N/A N/A N/A 38734819
    888571 8wm6:l (2.7) BS13 KC2 N/A N/A N/A 38734819
    888572 8wm6:l (2.7) BS14 CLA N/A N/A N/A 38734819
    888573 8wm6:l (2.7) BS15 II0 N/A N/A N/A 38734819
    888574 8wm6:l (2.7) BS16 II0 N/A N/A N/A 38734819
    888575 8wm6:l (2.7) BS17 II0 N/A N/A N/A 38734819
    888576 8wm6:l (2.7) BS18 WVN N/A N/A N/A 38734819
    888577 8wm6:l (2.7) BS19 II0 N/A N/A N/A 38734819
    888578 8wm6:m (2.7) BS01 CLA N/A N/A N/A 38734819
    888579 8wm6:m (2.7) BS02 CLA N/A N/A N/A 38734819
    888580 8wm6:m (2.7) BS03 CLA N/A N/A N/A 38734819
    888581 8wm6:m (2.7) BS04 CLA N/A N/A N/A 38734819
    888582 8wm6:m (2.7) BS05 CLA N/A N/A N/A 38734819
    888583 8wm6:m (2.7) BS06 CLA N/A N/A N/A 38734819
    888584 8wm6:m (2.7) BS07 CLA N/A N/A N/A 38734819
    888585 8wm6:m (2.7) BS08 CLA N/A N/A N/A 38734819
    888586 8wm6:m (2.7) BS09 CLA N/A N/A N/A 38734819
    888587 8wm6:m (2.7) BS10 CLA N/A N/A N/A 38734819
    888588 8wm6:m (2.7) BS11 KC2 N/A N/A N/A 38734819
    888589 8wm6:m (2.7) BS12 CLA N/A N/A N/A 38734819
    888590 8wm6:m (2.7) BS13 CLA N/A N/A N/A 38734819
    888591 8wm6:m (2.7) BS14 II0 N/A N/A N/A 38734819
    888592 8wm6:m (2.7) BS15 II0 N/A N/A N/A 38734819
    888593 8wm6:m (2.7) BS16 II0 N/A N/A N/A 38734819
    888594 8wm6:m (2.7) BS17 IHT N/A N/A N/A 38734819
    888595 8wm6:m (2.7) BS18 II0 N/A N/A N/A 38734819
    888596 8wm6:m (2.7) BS19 CLA N/A N/A N/A 38734819
    888597 8wm6:m (2.7) BS20 II0 N/A N/A N/A 38734819
    888598 8wm6:n (2.7) BS01 CLA N/A N/A N/A 38734819
    888599 8wm6:n (2.7) BS02 II0 N/A N/A N/A 38734819
    888600 8wm6:n (2.7) BS03 IHT N/A N/A N/A 38734819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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