Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4338 4339 4340 4341 4342 4343 4344 4345 4346 4347 4348 4349 4350 4351 4352 4353 4354 4355 4356 4357 4358 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    869401 8t8b:1Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37433044
    869402 8t8b:1Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 37433044
    869403 8t8b:1Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 37433044
    869404 8t8b:1b (2.65) BS01 rna ? GO:0003735 ... P80371 37433044
    869405 8t8b:1b (2.65) BS02 MG ? GO:0003735 ... P80371 37433044
    869406 8t8b:1c (2.65) BS01 rna ? GO:0003676 ... P80372 37433044
    869407 8t8b:1d (2.65) BS01 rna ? GO:0003723 ... P80373 37433044
    869408 8t8b:1d (2.65) BS02 MG ? GO:0003723 ... P80373 37433044
    869409 8t8b:1d (2.65) BS03 SF4 ? GO:0003723 ... P80373 37433044
    869410 8t8b:1e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 37433044
    869411 8t8b:1e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 37433044
    869412 8t8b:1f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 37433044
    869413 8t8b:1g (2.65) BS01 rna ? GO:0000028 ... P17291 37433044
    869414 8t8b:1h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 37433044
    869415 8t8b:1i (2.65) BS01 rna ? GO:0000049 ... P80374 37433044
    869416 8t8b:1j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 37433044
    869417 8t8b:1k (2.65) BS01 rna ? GO:0003735 ... P80376 37433044
    869418 8t8b:1k (2.65) BS02 MG ? GO:0003735 ... P80376 37433044
    869419 8t8b:1l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 37433044
    869420 8t8b:1l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37433044
    869421 8t8b:1m (2.65) BS01 rna ? GO:0000049 ... P80377 37433044
    869422 8t8b:1m (2.65) BS02 rna ? GO:0000049 ... P80377 37433044
    869423 8t8b:1m (2.65) BS03 MG ? GO:0000049 ... P80377 37433044
    869424 8t8b:1n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 37433044
    869425 8t8b:1n (2.65) BS02 MG ? GO:0003735 ... P0DOY6 37433044
    869426 8t8b:1n (2.65) BS03 ZN ? GO:0003735 ... P0DOY6 37433044
    869427 8t8b:1o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 37433044
    869428 8t8b:1o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 37433044
    869429 8t8b:1p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 37433044
    869430 8t8b:1q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 37433044
    869431 8t8b:1r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 37433044
    869432 8t8b:1s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 37433044
    869433 8t8b:1t (2.65) BS01 rna ? GO:0003723 ... P80380 37433044
    869434 8t8b:1t (2.65) BS02 MG ? GO:0003723 ... P80380 37433044
    869435 8t8b:1y (2.65) BS01 rna ? GO:0005515 ... P0AD49 37433044
    869436 8t8b:1y (2.65) BS02 MG ? GO:0005515 ... P0AD49 37433044
    869437 8t8b:20 (2.65) BS01 rna ? GO:0003735 ... P60493 37433044
    869438 8t8b:20 (2.65) BS02 rna ? GO:0003735 ... P60493 37433044
    869439 8t8b:20 (2.65) BS03 MG ? GO:0003735 ... P60493 37433044
    869440 8t8b:21 (2.65) BS01 rna ? GO:0003735 ... P60494 37433044
    869441 8t8b:22 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 37433044
    869442 8t8b:23 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 37433044
    869443 8t8b:23 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 37433044
    869444 8t8b:23 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37433044
    869445 8t8b:24 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 37433044
    869446 8t8b:24 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37433044
    869447 8t8b:25 (2.65) BS01 rna ? GO:0003735 ... P80339 37433044
    869448 8t8b:25 (2.65) BS02 MG ? GO:0003735 ... P80339 37433044
    869449 8t8b:25 (2.65) BS03 ZN ? GO:0003735 ... P80339 37433044
    869450 8t8b:26 (2.65) BS01 rna ? GO:0000049 ... P35871 37433044
    869451 8t8b:26 (2.65) BS02 ZN ? GO:0000049 ... P35871 37433044
    869452 8t8b:27 (2.65) BS01 rna ? GO:0003735 ... P80340 37433044
    869453 8t8b:27 (2.65) BS02 MG ? GO:0003735 ... P80340 37433044
    869454 8t8b:28 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 37433044
    869455 8t8b:29 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 37433044
    869456 8t8b:29 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37433044
    869457 8t8b:2D (2.65) BS01 rna ? GO:0002181 ... P60405 37433044
    869458 8t8b:2D (2.65) BS02 rna ? GO:0002181 ... P60405 37433044
    869459 8t8b:2D (2.65) BS03 MG ? GO:0002181 ... P60405 37433044
    869460 8t8b:2D (2.65) BS04 MG ? GO:0002181 ... P60405 37433044
    869461 8t8b:2D (2.65) BS05 MG ? GO:0002181 ... P60405 37433044
    869462 8t8b:2D (2.65) BS06 MG ? GO:0002181 ... P60405 37433044
    869463 8t8b:2D (2.65) BS07 MG ? GO:0002181 ... P60405 37433044
    869464 8t8b:2D (2.65) BS08 MG ? GO:0002181 ... P60405 37433044
    869465 8t8b:2D (2.65) BS09 MG ? GO:0002181 ... P60405 37433044
    869466 8t8b:2E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 37433044
    869467 8t8b:2E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37433044
    869468 8t8b:2E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37433044
    869469 8t8b:2E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 37433044
    869470 8t8b:2F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 37433044
    869471 8t8b:2F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37433044
    869472 8t8b:2F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37433044
    869473 8t8b:2G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 37433044
    869474 8t8b:2G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 37433044
    869475 8t8b:2G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37433044
    869476 8t8b:2H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 37433044
    869477 8t8b:2I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 37433044
    869478 8t8b:2N (2.65) BS01 rna ? GO:0003729 ... P60488 37433044
    869479 8t8b:2O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 37433044
    869480 8t8b:2O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 37433044
    869481 8t8b:2P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 37433044
    869482 8t8b:2Q (2.65) BS01 rna ? GO:0000049 ... P60489 37433044
    869483 8t8b:2Q (2.65) BS02 rna ? GO:0000049 ... P60489 37433044
    869484 8t8b:2Q (2.65) BS03 MG ? GO:0000049 ... P60489 37433044
    869485 8t8b:2Q (2.65) BS04 MG ? GO:0000049 ... P60489 37433044
    869486 8t8b:2R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 37433044
    869487 8t8b:2S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 37433044
    869488 8t8b:2S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 37433044
    869489 8t8b:2T (2.65) BS01 rna ? GO:0003735 ... P60490 37433044
    869490 8t8b:2T (2.65) BS02 rna ? GO:0003735 ... P60490 37433044
    869491 8t8b:2U (2.65) BS01 rna ? GO:0000027 ... P60491 37433044
    869492 8t8b:2V (2.65) BS01 rna ? GO:0003723 ... P60492 37433044
    869493 8t8b:2V (2.65) BS02 MG ? GO:0003723 ... P60492 37433044
    869494 8t8b:2V (2.65) BS03 MG ? GO:0003723 ... P60492 37433044
    869495 8t8b:2W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 37433044
    869496 8t8b:2W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37433044
    869497 8t8b:2X (2.65) BS01 rna ? GO:0000027 ... Q5SHP0 37433044
    869498 8t8b:2Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 37433044
    869499 8t8b:2Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37433044
    869500 8t8b:2Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 37433044
    869501 8t8b:2Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 37433044
    869502 8t8b:2b (2.65) BS01 rna ? GO:0003735 ... P80371 37433044
    869503 8t8b:2c (2.65) BS01 rna ? GO:0003676 ... P80372 37433044
    869504 8t8b:2d (2.65) BS01 rna ? GO:0003723 ... P80373 37433044
    869505 8t8b:2d (2.65) BS02 SF4 ? GO:0003723 ... P80373 37433044
    869506 8t8b:2e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 37433044
    869507 8t8b:2f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 37433044
    869508 8t8b:2f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 37433044
    869509 8t8b:2g (2.65) BS01 rna ? GO:0000028 ... P17291 37433044
    869510 8t8b:2h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 37433044
    869511 8t8b:2i (2.65) BS01 rna ? GO:0000049 ... P80374 37433044
    869512 8t8b:2j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 37433044
    869513 8t8b:2j (2.65) BS02 MG ? GO:0000049 ... Q5SHN7 37433044
    869514 8t8b:2k (2.65) BS01 rna ? GO:0003735 ... P80376 37433044
    869515 8t8b:2k (2.65) BS02 MG ? GO:0003735 ... P80376 37433044
    869516 8t8b:2l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 37433044
    869517 8t8b:2m (2.65) BS01 rna ? GO:0000049 ... P80377 37433044
    869518 8t8b:2n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 37433044
    869519 8t8b:2n (2.65) BS02 ZN ? GO:0003735 ... P0DOY6 37433044
    869520 8t8b:2o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 37433044
    869521 8t8b:2o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 37433044
    869522 8t8b:2p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 37433044
    869523 8t8b:2q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 37433044
    869524 8t8b:2r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 37433044
    869525 8t8b:2s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 37433044
    869526 8t8b:2t (2.65) BS01 rna ? GO:0003723 ... P80380 37433044
    869527 8t8b:2t (2.65) BS02 MG ? GO:0003723 ... P80380 37433044
    869528 8t8b:2y (2.65) BS01 rna ? GO:0005515 ... P0AD49 37433044
    869529 8t8c:10 (2.6) BS01 rna ? GO:0003735 ... P60493 37433044
    869530 8t8c:10 (2.6) BS02 rna ? GO:0003735 ... P60493 37433044
    869531 8t8c:10 (2.6) BS03 MG ? GO:0003735 ... P60493 37433044
    869532 8t8c:10 (2.6) BS04 MG ? GO:0003735 ... P60493 37433044
    869533 8t8c:10 (2.6) BS05 MG ? GO:0003735 ... P60493 37433044
    869534 8t8c:10 (2.6) BS06 MG ? GO:0003735 ... P60493 37433044
    869535 8t8c:11 (2.6) BS01 rna ? GO:0003735 ... P60494 37433044
    869536 8t8c:11 (2.6) BS02 MG ? GO:0003735 ... P60494 37433044
    869537 8t8c:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 37433044
    869538 8t8c:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 37433044
    869539 8t8c:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 37433044
    869540 8t8c:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 37433044
    869541 8t8c:13 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 37433044
    869542 8t8c:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 37433044
    869543 8t8c:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 37433044
    869544 8t8c:15 (2.6) BS01 rna ? GO:0003735 ... P80339 37433044
    869545 8t8c:15 (2.6) BS02 MG ? GO:0003735 ... P80339 37433044
    869546 8t8c:15 (2.6) BS03 MG ? GO:0003735 ... P80339 37433044
    869547 8t8c:15 (2.6) BS04 MG ? GO:0003735 ... P80339 37433044
    869548 8t8c:15 (2.6) BS05 ZN ? GO:0003735 ... P80339 37433044
    869549 8t8c:16 (2.6) BS01 rna ? GO:0000049 ... P35871 37433044
    869550 8t8c:16 (2.6) BS02 ZN ? GO:0000049 ... P35871 37433044
    869551 8t8c:17 (2.6) BS01 rna ? GO:0003735 ... P80340 37433044
    869552 8t8c:17 (2.6) BS02 MG ? GO:0003735 ... P80340 37433044
    869553 8t8c:17 (2.6) BS03 MG ? GO:0003735 ... P80340 37433044
    869554 8t8c:17 (2.6) BS04 MG ? GO:0003735 ... P80340 37433044
    869555 8t8c:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 37433044
    869556 8t8c:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 37433044
    869557 8t8c:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 37433044
    869558 8t8c:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 37433044
    869559 8t8c:19 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 37433044
    869560 8t8c:1D (2.6) BS01 rna ? GO:0002181 ... P60405 37433044
    869561 8t8c:1D (2.6) BS02 rna ? GO:0002181 ... P60405 37433044
    869562 8t8c:1D (2.6) BS03 MG ? GO:0002181 ... P60405 37433044
    869563 8t8c:1D (2.6) BS04 MG ? GO:0002181 ... P60405 37433044
    869564 8t8c:1D (2.6) BS05 MG ? GO:0002181 ... P60405 37433044
    869565 8t8c:1D (2.6) BS06 MG ? GO:0002181 ... P60405 37433044
    869566 8t8c:1D (2.6) BS07 MG ? GO:0002181 ... P60405 37433044
    869567 8t8c:1D (2.6) BS08 MG ? GO:0002181 ... P60405 37433044
    869568 8t8c:1D (2.6) BS09 MG ? GO:0002181 ... P60405 37433044
    869569 8t8c:1D (2.6) BS10 MG ? GO:0002181 ... P60405 37433044
    869570 8t8c:1D (2.6) BS11 MG ? GO:0002181 ... P60405 37433044
    869571 8t8c:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 37433044
    869572 8t8c:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 37433044
    869573 8t8c:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 37433044
    869574 8t8c:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 37433044
    869575 8t8c:1E (2.6) BS05 MG ? GO:0003735 ... Q5SHN8 37433044
    869576 8t8c:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 37433044
    869577 8t8c:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 37433044
    869578 8t8c:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 37433044
    869579 8t8c:1F (2.6) BS04 ARG ? GO:0003735 ... Q5SHN9 37433044
    869580 8t8c:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 37433044
    869581 8t8c:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 37433044
    869582 8t8c:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 37433044
    869583 8t8c:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 37433044
    869584 8t8c:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 37433044
    869585 8t8c:1F (2.6) BS10 MG ? GO:0003735 ... Q5SHN9 37433044
    869586 8t8c:1F (2.6) BS11 MG ? GO:0003735 ... Q5SHN9 37433044
    869587 8t8c:1F (2.6) BS12 MG ? GO:0003735 ... Q5SHN9 37433044
    869588 8t8c:1F (2.6) BS13 MG ? GO:0003735 ... Q5SHN9 37433044
    869589 8t8c:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 37433044
    869590 8t8c:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 37433044
    869591 8t8c:1G (2.6) BS03 MG ? GO:0000049 ... Q5SHQ0 37433044
    869592 8t8c:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 37433044
    869593 8t8c:1H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 37433044
    869594 8t8c:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 37433044
    869595 8t8c:1N (2.6) BS01 rna ? GO:0003729 ... P60488 37433044
    869596 8t8c:1N (2.6) BS02 MG ? GO:0003729 ... P60488 37433044
    869597 8t8c:1N (2.6) BS03 MG ? GO:0003729 ... P60488 37433044
    869598 8t8c:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 37433044
    869599 8t8c:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 37433044
    869600 8t8c:1O (2.6) BS03 MG ? GO:0003735 ... Q5SHP8 37433044
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218