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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    864201 8sf7:JH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864202 8sf7:JI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864203 8sf7:JI (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864204 8sf7:JJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864205 8sf7:JK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864206 8sf7:JL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864207 8sf7:JL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864208 8sf7:JM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864209 8sf7:JM (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864210 8sf7:JN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864211 8sf7:KA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864212 8sf7:KB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864213 8sf7:KC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864214 8sf7:KD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864215 8sf7:KE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864216 8sf7:KF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864217 8sf7:KG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864218 8sf7:KH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864219 8sf7:KI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864220 8sf7:KJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864221 8sf7:KK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864222 8sf7:KL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864223 8sf7:KL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864224 8sf7:KM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864225 8sf7:KN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864226 8sf7:LA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864227 8sf7:LB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864228 8sf7:LC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864229 8sf7:LC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864230 8sf7:LD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864231 8sf7:LE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864232 8sf7:LF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864233 8sf7:LG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864234 8sf7:LG (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864235 8sf7:LH (4.1) BS01 MG ? GO:0000226 ... P41352 38598282
    864236 8sf7:LH (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864237 8sf7:LI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864238 8sf7:LJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864239 8sf7:LK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864240 8sf7:LK (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864241 8sf7:LL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864242 8sf7:LM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864243 8sf7:LN (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864244 8sf7:LN (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864245 8sf7:MA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864246 8sf7:MB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864247 8sf7:MC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864248 8sf7:MD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864249 8sf7:MD (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864250 8sf7:ME (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864251 8sf7:MF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864252 8sf7:MG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864253 8sf7:MH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864254 8sf7:MI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864255 8sf7:MJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864256 8sf7:MK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864257 8sf7:ML (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864258 8sf7:MM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864259 8sf7:MN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864260 8sf7:NA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864261 8sf7:NB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864262 8sf7:NC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864263 8sf7:NC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864264 8sf7:ND (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864265 8sf7:ND (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864266 8sf7:NE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864267 8sf7:NF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864268 8sf7:NG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864269 8sf7:NG (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864270 8sf7:NH (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864271 8sf7:NH (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864272 8sf7:NI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864273 8sf7:NJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864274 8sf7:NK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864275 8sf7:NK (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864276 8sf7:NL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864277 8sf7:NL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864278 8sf7:NM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864279 8sf7:NN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864280 8sf7:OA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864281 8sf7:OA (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864282 8sf7:OB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864283 8sf7:OC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864284 8sf7:OD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864285 8sf7:OE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864286 8sf7:OF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864287 8sf7:OG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864288 8sf7:OH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864289 8sf7:OI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864290 8sf7:OI (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864291 8sf7:OJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864292 8sf7:OK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864293 8sf7:OL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864294 8sf7:OL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864295 8sf7:OM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864296 8sf7:ON (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864297 8sf7:PA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864298 8sf7:PA (4.1) BS02 GDP 3.6.5.- GO:0000226 ... P41351 38598282
    864299 8sf7:PB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864300 8sf7:PC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864301 8sf7:PD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864302 8sf7:PE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864303 8sf7:PF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864304 8sf7:PG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864305 8sf7:PH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864306 8sf7:PI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864307 8sf7:PJ (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864308 8sf7:PJ (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864309 8sf7:PK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864310 8sf7:PL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864311 8sf7:PM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864312 8sf7:PN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864313 8sf7:QA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864314 8sf7:QB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864315 8sf7:QB (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864316 8sf7:QC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864317 8sf7:QC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864318 8sf7:QD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864319 8sf7:QE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864320 8sf7:QF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864321 8sf7:QF (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864322 8sf7:QG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864323 8sf7:QG (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    864324 8sf7:QH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864325 8sf7:QH (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864326 8sf7:QI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864327 8sf7:QJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864328 8sf7:QK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864329 8sf7:QL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864330 8sf7:QM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864331 8sf7:QN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864332 8sf7:RA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864333 8sf7:RB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864334 8sf7:RC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864335 8sf7:RD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864336 8sf7:RE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864337 8sf7:RF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864338 8sf7:RG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864339 8sf7:RH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864340 8sf7:RI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864341 8sf7:RJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864342 8sf7:RK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864343 8sf7:RL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864344 8sf7:RL (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864345 8sf7:RM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864346 8sf7:RN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864347 8sf7:SA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864348 8sf7:SB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864349 8sf7:SB (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864350 8sf7:SC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864351 8sf7:SD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864352 8sf7:SE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864353 8sf7:SF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864354 8sf7:SG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864355 8sf7:SH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864356 8sf7:SI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864357 8sf7:SJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864358 8sf7:SK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864359 8sf7:SL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864360 8sf7:SL (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864361 8sf7:SM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864362 8sf7:SN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864363 8sf7:TA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864364 8sf7:TB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864365 8sf7:TC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864366 8sf7:TD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864367 8sf7:TE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864368 8sf7:TF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864369 8sf7:TG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864370 8sf7:TH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864371 8sf7:TI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864372 8sf7:TJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864373 8sf7:TK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864374 8sf7:TL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864375 8sf7:TM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864376 8sf7:TN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864377 8sf7:UA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864378 8sf7:UB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864379 8sf7:UC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864380 8sf7:UD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864381 8sf7:UE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864382 8sf7:UF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864383 8sf7:UG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864384 8sf7:UH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864385 8sf7:UI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864386 8sf7:UJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864387 8sf7:UJ (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864388 8sf7:UK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864389 8sf7:UL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864390 8sf7:UL (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    864391 8sf7:UM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864392 8sf7:UN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864393 8sf7:VA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864394 8sf7:VB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864395 8sf7:VC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864396 8sf7:VD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    864397 8sf7:VD (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    864398 8sf7:VE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    864399 8sf7:VF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    864400 8sf7:VG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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