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BioLiP Library
Download all results in tab-seperated text for 359 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 7d0j:B (3.42) BS19 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    202 7d0j:B (3.42) BS20 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    203 7d0j:B (3.42) BS21 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    204 7d0j:B (3.42) BS22 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    205 7d0j:B (3.42) BS23 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    206 7d0j:B (3.42) BS24 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    207 7d0j:B (3.42) BS25 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    208 7d0j:B (3.42) BS26 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    209 7d0j:B (3.42) BS27 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    210 7d0j:B (3.42) BS28 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    211 7d0j:B (3.42) BS29 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    212 7d0j:B (3.42) BS30 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    213 7d0j:B (3.42) BS31 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    214 7d0j:B (3.42) BS32 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    215 7d0j:B (3.42) BS33 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    216 7d0j:B (3.42) BS34 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    217 7d0j:B (3.42) BS35 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    218 7d0j:B (3.42) BS36 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    219 7d0j:B (3.42) BS37 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    220 7d0j:B (3.42) BS38 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    221 7d0j:B (3.42) BS39 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    222 7d0j:B (3.42) BS40 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    223 7d0j:B (3.42) BS41 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    224 7d0j:B (3.42) BS42 PQN 1.97.1.12 GO:0000287 ... P09144 33597543
    225 7d0j:B (3.42) BS43 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    226 7d0j:B (3.42) BS44 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    227 7d0j:B (3.42) BS45 CLA 1.97.1.12 GO:0000287 ... P09144 33597543
    228 7d0j:C (3.42) BS01 SF4 1.97.1.12 GO:0009055 ... Q00914 33597543
    229 7d0j:C (3.42) BS02 SF4 1.97.1.12 GO:0009055 ... Q00914 33597543
    230 7d0j:F (3.42) BS01 CLA ? GO:0009522 ... P12356 33597543
    231 7d0j:F (3.42) BS02 CLA ? GO:0009522 ... P12356 33597543
    232 7d0j:F (3.42) BS03 CLA ? GO:0009522 ... P12356 33597543
    233 7d0j:F (3.42) BS04 CLA ? GO:0009522 ... P12356 33597543
    234 7d0j:G (3.42) BS01 CLA ? GO:0009522 ... P14224 33597543
    235 7d0j:G (3.42) BS02 CLA ? GO:0009522 ... P14224 33597543
    236 7d0j:G (3.42) BS03 CLA ? GO:0009522 ... P14224 33597543
    237 7d0j:G (3.42) BS04 CLA ? GO:0009522 ... P14224 33597543
    238 7d0j:H (3.42) BS01 CLA ? GO:0009522 ... P13352 33597543
    239 7d0j:H (3.42) BS02 CLA ? GO:0009522 ... P13352 33597543
    240 7d0j:H (3.42) BS03 CLA ? GO:0009522 ... P13352 33597543
    241 7d0j:H (3.42) BS04 CLA ? GO:0009522 ... P13352 33597543
    242 7d0j:I (3.42) BS01 CLA ? GO:0009522 ... A8IFG7 33597543
    243 7d0j:J (3.42) BS01 CLA ? GO:0009507 ... P59777 33597543
    244 7d0j:J (3.42) BS02 CLA ? GO:0009507 ... P59777 33597543
    245 7d0j:J (3.42) BS03 CLA ? GO:0009507 ... P59777 33597543
    246 7d0j:J (3.42) BS04 CLA ? GO:0009507 ... P59777 33597543
    247 7d0j:K (3.42) BS01 CLA ? GO:0009522 ... P14225 33597543
    248 7d0j:K (3.42) BS02 CLA ? GO:0009522 ... P14225 33597543
    249 7d0j:K (3.42) BS03 CLA ? GO:0009522 ... P14225 33597543
    250 7d0j:K (3.42) BS04 CLA ? GO:0009522 ... P14225 33597543
    251 7d0j:K (3.42) BS05 CLA ? GO:0009522 ... P14225 33597543
    252 7d0j:L (3.42) BS01 CLA ? GO:0009522 ... A8IL32 33597543
    253 7d0j:L (3.42) BS02 CLA ? GO:0009522 ... A8IL32 33597543
    254 7d0j:L (3.42) BS03 CLA ? GO:0009522 ... A8IL32 33597543
    255 7d0j:L (3.42) BS04 CLA ? GO:0009522 ... A8IL32 33597543
    256 7d0j:L (3.42) BS05 CLA ? GO:0009522 ... A8IL32 33597543
    257 7d0j:L (3.42) BS06 CLA ? GO:0009522 ... A8IL32 33597543
    258 7d0j:L (3.42) BS07 CLA ? GO:0009522 ... A8IL32 33597543
    259 7d0j:O (3.42) BS01 CLA ? N/A A8JCL6 33597543
    260 7d0j:O (3.42) BS02 CLA ? N/A A8JCL6 33597543
    261 7d0j:O (3.42) BS03 CLA ? N/A A8JCL6 33597543
    262 7d0j:O (3.42) BS04 CLA ? N/A A8JCL6 33597543
    263 7d0j:O (3.42) BS05 CLA ? N/A A8JCL6 33597543
    264 7d0j:P (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    265 7d0j:P (3.42) BS02 CLA ? GO:0009765 ... Q93WL4 33597543
    266 7d0j:P (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    267 7d0j:P (3.42) BS04 CHL ? GO:0009765 ... Q93WL4 33597543
    268 7d0j:P (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    269 7d0j:P (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    270 7d0j:P (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    271 7d0j:P (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    272 7d0j:P (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    273 7d0j:P (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    274 7d0j:P (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    275 7d0j:P (3.42) BS12 CHL ? GO:0009765 ... Q93WL4 33597543
    276 7d0j:P (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    277 7d0j:Q (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    278 7d0j:Q (3.42) BS02 CHL ? GO:0009765 ... Q93WL4 33597543
    279 7d0j:Q (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    280 7d0j:Q (3.42) BS04 CLA ? GO:0009765 ... Q93WL4 33597543
    281 7d0j:Q (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    282 7d0j:Q (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    283 7d0j:Q (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    284 7d0j:Q (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    285 7d0j:Q (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    286 7d0j:Q (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    287 7d0j:Q (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    288 7d0j:Q (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    289 7d0j:Q (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    290 7d0j:R (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    291 7d0j:R (3.42) BS02 CLA ? GO:0009765 ... Q93WL4 33597543
    292 7d0j:R (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    293 7d0j:R (3.42) BS04 CHL ? GO:0009765 ... Q93WL4 33597543
    294 7d0j:R (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    295 7d0j:R (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    296 7d0j:R (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    297 7d0j:R (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    298 7d0j:R (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    299 7d0j:R (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    300 7d0j:R (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    301 7d0j:R (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    302 7d0j:R (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    303 7d0j:S (3.42) BS01 CLA ? GO:0009416 ... A8J264 33597543
    304 7d0j:S (3.42) BS02 CLA ? GO:0009416 ... A8J264 33597543
    305 7d0j:S (3.42) BS03 CHL ? GO:0009416 ... A8J264 33597543
    306 7d0j:S (3.42) BS04 CLA ? GO:0009416 ... A8J264 33597543
    307 7d0j:S (3.42) BS05 CLA ? GO:0009416 ... A8J264 33597543
    308 7d0j:S (3.42) BS06 CLA ? GO:0009416 ... A8J264 33597543
    309 7d0j:S (3.42) BS07 CHL ? GO:0009416 ... A8J264 33597543
    310 7d0j:S (3.42) BS08 CHL ? GO:0009416 ... A8J264 33597543
    311 7d0j:S (3.42) BS09 CHL ? GO:0009416 ... A8J264 33597543
    312 7d0j:S (3.42) BS10 CHL ? GO:0009416 ... A8J264 33597543
    313 7d0j:S (3.42) BS11 CHL ? GO:0009416 ... A8J264 33597543
    314 7d0j:S (3.42) BS12 CLA ? GO:0009416 ... A8J264 33597543
    315 7d0j:S (3.42) BS13 CLA ? GO:0009416 ... A8J264 33597543
    316 7d0j:S (3.42) BS14 CLA ? GO:0009416 ... A8J264 33597543
    317 7d0j:S (3.42) BS15 CLA ? GO:0009416 ... A8J264 33597543
    318 7d0j:S (3.42) BS16 CLA ? GO:0009416 ... A8J264 33597543
    319 7d0j:S (3.42) BS17 CHL ? GO:0009416 ... A8J264 33597543
    320 7d0j:T (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    321 7d0j:T (3.42) BS02 CHL ? GO:0009765 ... Q93WL4 33597543
    322 7d0j:T (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    323 7d0j:T (3.42) BS04 CLA ? GO:0009765 ... Q93WL4 33597543
    324 7d0j:T (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    325 7d0j:T (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    326 7d0j:T (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    327 7d0j:T (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    328 7d0j:T (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    329 7d0j:T (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    330 7d0j:T (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    331 7d0j:T (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    332 7d0j:T (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    333 7d0j:U (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    334 7d0j:U (3.42) BS02 CLA ? GO:0009765 ... Q93WL4 33597543
    335 7d0j:U (3.42) BS03 CHL ? GO:0009765 ... Q93WL4 33597543
    336 7d0j:U (3.42) BS04 CLA ? GO:0009765 ... Q93WL4 33597543
    337 7d0j:U (3.42) BS05 CLA ? GO:0009765 ... Q93WL4 33597543
    338 7d0j:U (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    339 7d0j:U (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    340 7d0j:U (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    341 7d0j:U (3.42) BS09 CHL ? GO:0009765 ... Q93WL4 33597543
    342 7d0j:U (3.42) BS10 CHL ? GO:0009765 ... Q93WL4 33597543
    343 7d0j:U (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    344 7d0j:U (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    345 7d0j:U (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    346 7d0j:U (3.42) BS14 CLA ? GO:0009765 ... Q93WL4 33597543
    347 7d0j:a (3.42) BS01 CHL ? GO:0009765 ... Q05093 33597543
    348 7d0j:a (3.42) BS02 CLA ? GO:0009765 ... Q05093 33597543
    349 7d0j:a (3.42) BS03 CLA ? GO:0009765 ... Q05093 33597543
    350 7d0j:a (3.42) BS04 CLA ? GO:0009765 ... Q05093 33597543
    351 7d0j:a (3.42) BS05 CLA ? GO:0009765 ... Q05093 33597543
    352 7d0j:a (3.42) BS06 CHL ? GO:0009765 ... Q05093 33597543
    353 7d0j:a (3.42) BS07 CLA ? GO:0009765 ... Q05093 33597543
    354 7d0j:a (3.42) BS08 CLA ? GO:0009765 ... Q05093 33597543
    355 7d0j:a (3.42) BS09 CLA ? GO:0009765 ... Q05093 33597543
    356 7d0j:a (3.42) BS10 CLA ? GO:0009765 ... Q05093 33597543
    357 7d0j:a (3.42) BS11 CLA ? GO:0009765 ... Q05093 33597543
    358 7d0j:a (3.42) BS12 CLA ? GO:0009765 ... Q05093 33597543
    359 7d0j:a (3.42) BS13 CLA ? GO:0009765 ... Q05093 33597543
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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