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BioLiP
Download all results in tab-seperated text for 67 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8wck:1 (2.71) BS01 A86 N/A N/A A0A679BXP6 39030906
    2 8wck:1 (2.71) BS02 A86 N/A N/A A0A679BXP6 39030906
    3 8wck:1 (2.71) BS03 A86 N/A N/A A0A679BXP6 39030906
    4 8wck:1 (2.71) BS04 A86 N/A N/A A0A679BXP6 39030906
    5 8wck:1 (2.71) BS05 A86 N/A N/A A0A679BXP6 39030906
    6 8wck:1 (2.71) BS06 A86 N/A N/A A0A679BXP6 39030906
    7 8wck:1 (2.71) BS07 CLA N/A N/A A0A679BXP6 39030906
    8 8wck:1 (2.71) BS08 KC2 N/A N/A A0A679BXP6 39030906
    9 8wck:1 (2.71) BS09 CLA N/A N/A A0A679BXP6 39030906
    10 8wck:1 (2.71) BS10 KC2 N/A N/A A0A679BXP6 39030906
    11 8wck:1 (2.71) BS11 KC1 N/A N/A A0A679BXP6 39030906
    12 8wck:1 (2.71) BS12 CLA N/A N/A A0A679BXP6 39030906
    13 8wck:1 (2.71) BS13 KC1 N/A N/A A0A679BXP6 39030906
    14 8wck:1 (2.71) BS14 CLA N/A N/A A0A679BXP6 39030906
    15 8wck:1 (2.71) BS15 CLA N/A N/A A0A679BXP6 39030906
    16 8wck:1 (2.71) BS16 CLA N/A N/A A0A679BXP6 39030906
    17 8wck:1 (2.71) BS17 CLA N/A N/A A0A679BXP6 39030906
    18 8wck:2 (2.71) BS01 CLA N/A N/A A0A679BXP6 39030906
    19 8wck:2 (2.71) BS02 A86 N/A N/A A0A679BXP6 39030906
    20 8wck:2 (2.71) BS03 A86 N/A N/A A0A679BXP6 39030906
    21 8wck:2 (2.71) BS04 A86 N/A N/A A0A679BXP6 39030906
    22 8wck:2 (2.71) BS05 A86 N/A N/A A0A679BXP6 39030906
    23 8wck:2 (2.71) BS06 A86 N/A N/A A0A679BXP6 39030906
    24 8wck:2 (2.71) BS07 A86 N/A N/A A0A679BXP6 39030906
    25 8wck:2 (2.71) BS08 CLA N/A N/A A0A679BXP6 39030906
    26 8wck:2 (2.71) BS09 CLA N/A N/A A0A679BXP6 39030906
    27 8wck:2 (2.71) BS10 KC2 N/A N/A A0A679BXP6 39030906
    28 8wck:2 (2.71) BS11 CLA N/A N/A A0A679BXP6 39030906
    29 8wck:2 (2.71) BS12 KC2 N/A N/A A0A679BXP6 39030906
    30 8wck:2 (2.71) BS13 KC1 N/A N/A A0A679BXP6 39030906
    31 8wck:2 (2.71) BS14 CLA N/A N/A A0A679BXP6 39030906
    32 8wck:2 (2.71) BS15 KC1 N/A N/A A0A679BXP6 39030906
    33 8wck:2 (2.71) BS16 CLA N/A N/A A0A679BXP6 39030906
    34 8wck:2 (2.71) BS17 CLA N/A N/A A0A679BXP6 39030906
    35 8wck:3 (2.71) BS01 CLA N/A N/A A0A679BXP6 39030906
    36 8wck:3 (2.71) BS02 A86 N/A N/A A0A679BXP6 39030906
    37 8wck:3 (2.71) BS03 A86 N/A N/A A0A679BXP6 39030906
    38 8wck:3 (2.71) BS04 A86 N/A N/A A0A679BXP6 39030906
    39 8wck:3 (2.71) BS05 A86 N/A N/A A0A679BXP6 39030906
    40 8wck:3 (2.71) BS06 A86 N/A N/A A0A679BXP6 39030906
    41 8wck:3 (2.71) BS07 A86 N/A N/A A0A679BXP6 39030906
    42 8wck:3 (2.71) BS08 CLA N/A N/A A0A679BXP6 39030906
    43 8wck:3 (2.71) BS09 CLA N/A N/A A0A679BXP6 39030906
    44 8wck:3 (2.71) BS10 KC2 N/A N/A A0A679BXP6 39030906
    45 8wck:3 (2.71) BS11 CLA N/A N/A A0A679BXP6 39030906
    46 8wck:3 (2.71) BS12 KC2 N/A N/A A0A679BXP6 39030906
    47 8wck:3 (2.71) BS13 KC1 N/A N/A A0A679BXP6 39030906
    48 8wck:3 (2.71) BS14 CLA N/A N/A A0A679BXP6 39030906
    49 8wck:3 (2.71) BS15 KC1 N/A N/A A0A679BXP6 39030906
    50 8wck:3 (2.71) BS16 CLA N/A N/A A0A679BXP6 39030906
    51 8wck:3 (2.71) BS17 CLA N/A N/A A0A679BXP6 39030906
    52 8wck:4 (2.71) BS01 CLA N/A N/A A0A679BXP6 39030906
    53 8wck:4 (2.71) BS02 CLA N/A N/A A0A679BXP6 39030906
    54 8wck:4 (2.71) BS03 A86 N/A N/A A0A679BXP6 39030906
    55 8wck:4 (2.71) BS04 A86 N/A N/A A0A679BXP6 39030906
    56 8wck:4 (2.71) BS05 A86 N/A N/A A0A679BXP6 39030906
    57 8wck:4 (2.71) BS06 A86 N/A N/A A0A679BXP6 39030906
    58 8wck:4 (2.71) BS07 A86 N/A N/A A0A679BXP6 39030906
    59 8wck:4 (2.71) BS08 CLA N/A N/A A0A679BXP6 39030906
    60 8wck:4 (2.71) BS09 KC2 N/A N/A A0A679BXP6 39030906
    61 8wck:4 (2.71) BS10 CLA N/A N/A A0A679BXP6 39030906
    62 8wck:4 (2.71) BS11 KC2 N/A N/A A0A679BXP6 39030906
    63 8wck:4 (2.71) BS12 KC1 N/A N/A A0A679BXP6 39030906
    64 8wck:4 (2.71) BS13 CLA N/A N/A A0A679BXP6 39030906
    65 8wck:4 (2.71) BS14 KC1 N/A N/A A0A679BXP6 39030906
    66 8wck:4 (2.71) BS15 CLA N/A N/A A0A679BXP6 39030906
    67 8wck:4 (2.71) BS16 CLA N/A N/A A0A679BXP6 39030906
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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