Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 72 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8qav:A (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    2 8qav:A (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    3 8qav:A (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    4 8qav:B (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    5 8qav:B (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    6 8qav:B (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    7 8qav:C (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    8 8qav:C (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    9 8qav:C (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    10 8qav:D (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    11 8qav:D (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    12 8qav:D (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    13 8qav:E (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    14 8qav:E (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    15 8qav:E (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    16 8qav:F (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    17 8qav:F (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    18 8qav:F (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    19 8qav:G (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    20 8qav:G (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    21 8qav:G (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    22 8qav:H (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    23 8qav:H (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    24 8qav:H (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    25 8qav:I (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    26 8qav:I (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    27 8qav:I (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    28 8qav:J (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    29 8qav:J (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    30 8qav:J (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    31 8qav:K (2.23) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    32 8qav:K (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    33 8qav:K (2.23) BS03 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    34 8qav:L (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    35 8qav:L (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    36 8qav:L (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    37 8qav:M (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    38 8qav:M (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    39 8qav:M (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    40 8qav:N (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    41 8qav:N (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    42 8qav:N (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    43 8qav:O (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    44 8qav:O (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    45 8qav:O (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    46 8qav:P (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    47 8qav:P (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    48 8qav:P (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    49 8qav:Q (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    50 8qav:Q (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    51 8qav:Q (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    52 8qav:R (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    53 8qav:R (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    54 8qav:R (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    55 8qav:S (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    56 8qav:S (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    57 8qav:S (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    58 8qav:T (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    59 8qav:T (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    60 8qav:T (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    61 8qav:V (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    62 8qav:V (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    63 8qav:V (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    64 8qav:W (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    65 8qav:W (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    66 8qav:W (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    67 8qav:X (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    68 8qav:X (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    69 8qav:X (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    70 8qav:Y (2.23) BS01 IG2 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    71 8qav:Y (2.23) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    72 8qav:Y (2.23) BS03 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 38559763
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218