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BioLiP
Download all results in tab-seperated text for 19 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8aly:A (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    2 8aly:B (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    3 8aly:C (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    4 8aly:D (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    5 8aly:E (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    6 8aly:F (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    7 8aly:G (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    8 8aly:H (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    9 8aly:I (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    10 8aly:J (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    11 8aly:K (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    12 8aly:L (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    13 8aly:M (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    14 8aly:N (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    15 8aly:O (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    16 8aly:Q (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    17 8aly:R (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    18 8aly:S (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    19 8aly:T (2.98) BS01 ZN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 36418402
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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