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BioLiP
Download all results in tab-seperated text for 108 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8akr:0 (3.8) BS01 ADP ? N/A P74717 39152237
    2 8akr:1 (3.8) BS01 ADP ? N/A P74717 39152237
    3 8akr:1 (3.8) BS02 ADP ? N/A P74717 39152237
    4 8akr:2 (3.8) BS01 ADP ? N/A P74717 39152237
    5 8akr:2 (3.8) BS02 ADP ? N/A P74717 39152237
    6 8akr:3 (3.8) BS01 ADP ? N/A P74717 39152237
    7 8akr:3 (3.8) BS02 ADP ? N/A P74717 39152237
    8 8akr:4 (3.8) BS01 ADP ? N/A P74717 39152237
    9 8akr:5 (3.8) BS01 ADP ? N/A P74717 39152237
    10 8akr:6 (3.8) BS01 ADP ? N/A P74717 39152237
    11 8akr:7 (3.8) BS01 ADP ? N/A P74717 39152237
    12 8akr:A (3.8) BS01 ADP ? N/A P74717 39152237
    13 8akr:A (3.8) BS02 ADP ? N/A P74717 39152237
    14 8akr:B (3.8) BS01 ADP ? N/A P74717 39152237
    15 8akr:B (3.8) BS02 ADP ? N/A P74717 39152237
    16 8akr:C (3.8) BS01 ADP ? N/A P74717 39152237
    17 8akr:C (3.8) BS02 ADP ? N/A P74717 39152237
    18 8akr:D (3.8) BS01 ADP ? N/A P74717 39152237
    19 8akr:D (3.8) BS02 ADP ? N/A P74717 39152237
    20 8akr:E (3.8) BS01 ADP ? N/A P74717 39152237
    21 8akr:E (3.8) BS02 ADP ? N/A P74717 39152237
    22 8akr:F (3.8) BS01 ADP ? N/A P74717 39152237
    23 8akr:F (3.8) BS02 ADP ? N/A P74717 39152237
    24 8akr:G (3.8) BS01 ADP ? N/A P74717 39152237
    25 8akr:G (3.8) BS02 ADP ? N/A P74717 39152237
    26 8akr:H (3.8) BS01 ADP ? N/A P74717 39152237
    27 8akr:H (3.8) BS02 ADP ? N/A P74717 39152237
    28 8akr:I (3.8) BS01 ADP ? N/A P74717 39152237
    29 8akr:I (3.8) BS02 ADP ? N/A P74717 39152237
    30 8akr:J (3.8) BS01 ADP ? N/A P74717 39152237
    31 8akr:J (3.8) BS02 ADP ? N/A P74717 39152237
    32 8akr:K (3.8) BS01 ADP ? N/A P74717 39152237
    33 8akr:K (3.8) BS02 ADP ? N/A P74717 39152237
    34 8akr:L (3.8) BS01 ADP ? N/A P74717 39152237
    35 8akr:L (3.8) BS02 ADP ? N/A P74717 39152237
    36 8akr:M (3.8) BS01 ADP ? N/A P74717 39152237
    37 8akr:M (3.8) BS02 ADP ? N/A P74717 39152237
    38 8akr:N (3.8) BS01 ADP ? N/A P74717 39152237
    39 8akr:N (3.8) BS02 ADP ? N/A P74717 39152237
    40 8akr:O (3.8) BS01 ADP ? N/A P74717 39152237
    41 8akr:O (3.8) BS02 ADP ? N/A P74717 39152237
    42 8akr:P (3.8) BS01 ADP ? N/A P74717 39152237
    43 8akr:P (3.8) BS02 ADP ? N/A P74717 39152237
    44 8akr:Q (3.8) BS01 ADP ? N/A P74717 39152237
    45 8akr:Q (3.8) BS02 ADP ? N/A P74717 39152237
    46 8akr:R (3.8) BS01 ADP ? N/A P74717 39152237
    47 8akr:S (3.8) BS01 ADP ? N/A P74717 39152237
    48 8akr:S (3.8) BS02 ADP ? N/A P74717 39152237
    49 8akr:T (3.8) BS01 ADP ? N/A P74717 39152237
    50 8akr:T (3.8) BS02 ADP ? N/A P74717 39152237
    51 8akr:U (3.8) BS01 ADP ? N/A P74717 39152237
    52 8akr:U (3.8) BS02 ADP ? N/A P74717 39152237
    53 8akr:V (3.8) BS01 ADP ? N/A P74717 39152237
    54 8akr:V (3.8) BS02 ADP ? N/A P74717 39152237
    55 8akr:W (3.8) BS01 ADP ? N/A P74717 39152237
    56 8akr:W (3.8) BS02 ADP ? N/A P74717 39152237
    57 8akr:X (3.8) BS01 ADP ? N/A P74717 39152237
    58 8akr:X (3.8) BS02 ADP ? N/A P74717 39152237
    59 8akr:Y (3.8) BS01 ADP ? N/A P74717 39152237
    60 8akr:Y (3.8) BS02 ADP ? N/A P74717 39152237
    61 8akr:Z (3.8) BS01 ADP ? N/A P74717 39152237
    62 8akr:Z (3.8) BS02 ADP ? N/A P74717 39152237
    63 8akr:a (3.8) BS01 ADP ? N/A P74717 39152237
    64 8akr:b (3.8) BS01 ADP ? N/A P74717 39152237
    65 8akr:c (3.8) BS01 ADP ? N/A P74717 39152237
    66 8akr:d (3.8) BS01 ADP ? N/A P74717 39152237
    67 8akr:e (3.8) BS01 ADP ? N/A P74717 39152237
    68 8akr:e (3.8) BS02 ADP ? N/A P74717 39152237
    69 8akr:f (3.8) BS01 ADP ? N/A P74717 39152237
    70 8akr:f (3.8) BS02 ADP ? N/A P74717 39152237
    71 8akr:g (3.8) BS01 ADP ? N/A P74717 39152237
    72 8akr:h (3.8) BS01 ADP ? N/A P74717 39152237
    73 8akr:h (3.8) BS02 ADP ? N/A P74717 39152237
    74 8akr:i (3.8) BS01 ADP ? N/A P74717 39152237
    75 8akr:i (3.8) BS02 ADP ? N/A P74717 39152237
    76 8akr:j (3.8) BS01 ADP ? N/A P74717 39152237
    77 8akr:j (3.8) BS02 ADP ? N/A P74717 39152237
    78 8akr:k (3.8) BS01 ADP ? N/A P74717 39152237
    79 8akr:k (3.8) BS02 ADP ? N/A P74717 39152237
    80 8akr:l (3.8) BS01 ADP ? N/A P74717 39152237
    81 8akr:l (3.8) BS02 ADP ? N/A P74717 39152237
    82 8akr:m (3.8) BS01 ADP ? N/A P74717 39152237
    83 8akr:m (3.8) BS02 ADP ? N/A P74717 39152237
    84 8akr:n (3.8) BS01 ADP ? N/A P74717 39152237
    85 8akr:n (3.8) BS02 ADP ? N/A P74717 39152237
    86 8akr:o (3.8) BS01 ADP ? N/A P74717 39152237
    87 8akr:o (3.8) BS02 ADP ? N/A P74717 39152237
    88 8akr:p (3.8) BS01 ADP ? N/A P74717 39152237
    89 8akr:p (3.8) BS02 ADP ? N/A P74717 39152237
    90 8akr:q (3.8) BS01 ADP ? N/A P74717 39152237
    91 8akr:q (3.8) BS02 ADP ? N/A P74717 39152237
    92 8akr:r (3.8) BS01 ADP ? N/A P74717 39152237
    93 8akr:r (3.8) BS02 ADP ? N/A P74717 39152237
    94 8akr:s (3.8) BS01 ADP ? N/A P74717 39152237
    95 8akr:s (3.8) BS02 ADP ? N/A P74717 39152237
    96 8akr:t (3.8) BS01 ADP ? N/A P74717 39152237
    97 8akr:t (3.8) BS02 ADP ? N/A P74717 39152237
    98 8akr:u (3.8) BS01 ADP ? N/A P74717 39152237
    99 8akr:u (3.8) BS02 ADP ? N/A P74717 39152237
    100 8akr:v (3.8) BS01 ADP ? N/A P74717 39152237
    101 8akr:v (3.8) BS02 ADP ? N/A P74717 39152237
    102 8akr:w (3.8) BS01 ADP ? N/A P74717 39152237
    103 8akr:x (3.8) BS01 ADP ? N/A P74717 39152237
    104 8akr:x (3.8) BS02 ADP ? N/A P74717 39152237
    105 8akr:y (3.8) BS01 ADP ? N/A P74717 39152237
    106 8akr:y (3.8) BS02 ADP ? N/A P74717 39152237
    107 8akr:z (3.8) BS01 ADP ? N/A P74717 39152237
    108 8akr:z (3.8) BS02 ADP ? N/A P74717 39152237
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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