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BioLiP
Download all results in tab-seperated text for 306 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 7xqp:B (2.68) BS21 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    202 7xqp:B (2.68) BS22 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    203 7xqp:B (2.68) BS23 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    204 7xqp:B (2.68) BS24 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    205 7xqp:B (2.68) BS25 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    206 7xqp:B (2.68) BS26 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    207 7xqp:B (2.68) BS27 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    208 7xqp:B (2.68) BS28 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    209 7xqp:B (2.68) BS29 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    210 7xqp:B (2.68) BS30 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    211 7xqp:B (2.68) BS31 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    212 7xqp:B (2.68) BS32 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    213 7xqp:B (2.68) BS33 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    214 7xqp:B (2.68) BS34 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    215 7xqp:B (2.68) BS35 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    216 7xqp:B (2.68) BS36 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    217 7xqp:B (2.68) BS37 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    218 7xqp:B (2.68) BS38 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    219 7xqp:B (2.68) BS39 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    220 7xqp:B (2.68) BS40 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    221 7xqp:B (2.68) BS41 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    222 7xqp:B (2.68) BS42 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    223 7xqp:B (2.68) BS43 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    224 7xqp:B (2.68) BS44 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    225 7xqp:B (2.68) BS45 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    226 7xqp:B (2.68) BS46 PQN 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    227 7xqp:B (2.68) BS47 CLA 1.97.1.12 GO:0000287 ... Q8MFA2 37095225
    228 7xqp:C (2.68) BS01 SF4 1.97.1.12 GO:0009055 ... Q6YXQ2 37095225
    229 7xqp:C (2.68) BS02 SF4 1.97.1.12 GO:0009055 ... Q6YXQ2 37095225
    230 7xqp:F (2.68) BS01 CLA ? GO:0009522 ... A0A2K1J0L9 37095225
    231 7xqp:F (2.68) BS02 CLA ? GO:0009522 ... A0A2K1J0L9 37095225
    232 7xqp:F (2.68) BS03 CLA ? GO:0009522 ... A0A2K1J0L9 37095225
    233 7xqp:F (2.68) BS04 CLA ? GO:0009522 ... A0A2K1J0L9 37095225
    234 7xqp:F (2.68) BS05 CLA ? GO:0009522 ... A0A2K1J0L9 37095225
    235 7xqp:F (2.68) BS06 CLA ? GO:0009522 ... A0A2K1J0L9 37095225
    236 7xqp:G (2.68) BS01 CLA ? GO:0009522 ... A0A2K1JC42 37095225
    237 7xqp:G (2.68) BS02 CLA ? GO:0009522 ... A0A2K1JC42 37095225
    238 7xqp:G (2.68) BS03 CLA ? GO:0009522 ... A0A2K1JC42 37095225
    239 7xqp:G (2.68) BS04 CLA ? GO:0009522 ... A0A2K1JC42 37095225
    240 7xqp:H (2.68) BS01 CLA ? GO:0009522 ... A9SL09 37095225
    241 7xqp:H (2.68) BS02 CLA ? GO:0009522 ... A9SL09 37095225
    242 7xqp:H (2.68) BS03 CLA ? GO:0009522 ... A9SL09 37095225
    243 7xqp:I (2.68) BS01 CLA ? GO:0009507 ... Q6YXR3 37095225
    244 7xqp:J (2.68) BS01 CLA ? GO:0009507 ... Q6YXM2 37095225
    245 7xqp:J (2.68) BS02 CLA ? GO:0009507 ... Q6YXM2 37095225
    246 7xqp:J (2.68) BS03 CLA ? GO:0009507 ... Q6YXM2 37095225
    247 7xqp:J (2.68) BS04 CLA ? GO:0009507 ... Q6YXM2 37095225
    248 7xqp:K (2.68) BS01 CLA ? GO:0009522 ... A0A2K1KU02 37095225
    249 7xqp:K (2.68) BS02 CLA ? GO:0009522 ... A0A2K1KU02 37095225
    250 7xqp:K (2.68) BS03 CLA ? GO:0009522 ... A0A2K1KU02 37095225
    251 7xqp:K (2.68) BS04 CLA ? GO:0009522 ... A0A2K1KU02 37095225
    252 7xqp:L (2.68) BS01 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    253 7xqp:L (2.68) BS02 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    254 7xqp:L (2.68) BS03 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    255 7xqp:L (2.68) BS04 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    256 7xqp:L (2.68) BS05 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    257 7xqp:L (2.68) BS06 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    258 7xqp:L (2.68) BS07 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    259 7xqp:L (2.68) BS08 CLA ? GO:0009522 ... A0A2K1IAD0 37095225
    260 7xqp:M (2.68) BS01 CLA ? GO:0009507 ... Q6YXK4 37095225
    261 7xqp:O (2.68) BS01 CLA ? N/A A0A2K1JDE1 37095225
    262 7xqp:O (2.68) BS02 CLA ? N/A A0A2K1JDE1 37095225
    263 7xqp:a (2.68) BS01 CHL ? GO:0009765 ... A9RT62 37095225
    264 7xqp:a (2.68) BS02 CLA ? GO:0009765 ... A9RT62 37095225
    265 7xqp:a (2.68) BS03 CLA ? GO:0009765 ... A9RT62 37095225
    266 7xqp:a (2.68) BS04 CLA ? GO:0009765 ... A9RT62 37095225
    267 7xqp:a (2.68) BS05 CHL ? GO:0009765 ... A9RT62 37095225
    268 7xqp:a (2.68) BS06 CHL ? GO:0009765 ... A9RT62 37095225
    269 7xqp:a (2.68) BS07 CHL ? GO:0009765 ... A9RT62 37095225
    270 7xqp:a (2.68) BS08 CHL ? GO:0009765 ... A9RT62 37095225
    271 7xqp:a (2.68) BS09 CHL ? GO:0009765 ... A9RT62 37095225
    272 7xqp:a (2.68) BS10 CLA ? GO:0009765 ... A9RT62 37095225
    273 7xqp:a (2.68) BS11 CLA ? GO:0009765 ... A9RT62 37095225
    274 7xqp:a (2.68) BS12 CLA ? GO:0009765 ... A9RT62 37095225
    275 7xqp:a (2.68) BS13 CLA ? GO:0009765 ... A9RT62 37095225
    276 7xqp:a (2.68) BS14 CHL ? GO:0009765 ... A9RT62 37095225
    277 7xqp:b (2.68) BS01 CHL ? GO:0009765 ... A9RT62 37095225
    278 7xqp:b (2.68) BS02 CHL ? GO:0009765 ... A9RT62 37095225
    279 7xqp:b (2.68) BS03 CHL ? GO:0009765 ... A9RT62 37095225
    280 7xqp:b (2.68) BS04 CLA ? GO:0009765 ... A9RT62 37095225
    281 7xqp:b (2.68) BS05 CLA ? GO:0009765 ... A9RT62 37095225
    282 7xqp:b (2.68) BS06 CHL ? GO:0009765 ... A9RT62 37095225
    283 7xqp:b (2.68) BS07 CHL ? GO:0009765 ... A9RT62 37095225
    284 7xqp:b (2.68) BS08 CHL ? GO:0009765 ... A9RT62 37095225
    285 7xqp:b (2.68) BS09 CHL ? GO:0009765 ... A9RT62 37095225
    286 7xqp:b (2.68) BS10 CHL ? GO:0009765 ... A9RT62 37095225
    287 7xqp:b (2.68) BS11 CLA ? GO:0009765 ... A9RT62 37095225
    288 7xqp:b (2.68) BS12 CLA ? GO:0009765 ... A9RT62 37095225
    289 7xqp:b (2.68) BS13 CLA ? GO:0009765 ... A9RT62 37095225
    290 7xqp:b (2.68) BS14 CLA ? GO:0009765 ... A9RT62 37095225
    291 7xqp:b (2.68) BS15 CLA ? GO:0009765 ... A9RT62 37095225
    292 7xqp:c (2.68) BS01 CHL ? GO:0009765 ... A9RT62 37095225
    293 7xqp:c (2.68) BS02 CHL ? GO:0009765 ... A9RT62 37095225
    294 7xqp:c (2.68) BS03 CLA ? GO:0009765 ... A9RT62 37095225
    295 7xqp:c (2.68) BS04 CLA ? GO:0009765 ... A9RT62 37095225
    296 7xqp:c (2.68) BS05 CLA ? GO:0009765 ... A9RT62 37095225
    297 7xqp:c (2.68) BS06 CHL ? GO:0009765 ... A9RT62 37095225
    298 7xqp:c (2.68) BS07 CHL ? GO:0009765 ... A9RT62 37095225
    299 7xqp:c (2.68) BS08 CHL ? GO:0009765 ... A9RT62 37095225
    300 7xqp:c (2.68) BS09 CHL ? GO:0009765 ... A9RT62 37095225
    301 7xqp:c (2.68) BS10 CHL ? GO:0009765 ... A9RT62 37095225
    302 7xqp:c (2.68) BS11 CLA ? GO:0009765 ... A9RT62 37095225
    303 7xqp:c (2.68) BS12 CLA ? GO:0009765 ... A9RT62 37095225
    304 7xqp:c (2.68) BS13 CLA ? GO:0009765 ... A9RT62 37095225
    305 7xqp:c (2.68) BS14 CLA ? GO:0009765 ... A9RT62 37095225
    306 7xqp:c (2.68) BS15 CLA ? GO:0009765 ... A9RT62 37095225
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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