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BioLiP
Download all results in tab-seperated text for 38 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7tbl:A1 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    2 7tbl:A1 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    3 7tbl:A2 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    4 7tbl:A2 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    5 7tbl:A2 (23.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    6 7tbl:A3 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    7 7tbl:A3 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    8 7tbl:A4 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    9 7tbl:A4 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    10 7tbl:A4 (23.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    11 7tbl:A5 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    12 7tbl:A5 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    13 7tbl:A5 (23.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    14 7tbl:A6 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    15 7tbl:A6 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    16 7tbl:A6 (23.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    17 7tbl:D1 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    18 7tbl:D2 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    19 7tbl:D3 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    20 7tbl:D4 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    21 7tbl:D5 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    22 7tbl:D6 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    23 7tbl:D7 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    24 7tbl:F1 (23.0) BS01 peptide N/A GO:0017056 ... N/A 35679405
    25 7tbl:F2 (23.0) BS01 peptide N/A GO:0017056 ... N/A 35679405
    26 7tbl:I1 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    27 7tbl:I1 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    28 7tbl:I1 (23.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    29 7tbl:I2 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    30 7tbl:I2 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    31 7tbl:I2 (23.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    32 7tbl:I3 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    33 7tbl:I3 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    34 7tbl:I4 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    35 7tbl:I4 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    36 7tbl:I5 (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    37 7tbl:I5 (23.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    38 7tbl:e (23.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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