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BioLiP
Download all results in tab-seperated text for 40 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7fs6:A (2.241) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    2 7fs6:A (2.241) BS02 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    3 7fs6:A (2.241) BS03 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    4 7fs6:A (2.241) BS04 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    5 7fs6:B (2.241) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    6 7fs6:B (2.241) BS02 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    7 7fs6:B (2.241) BS03 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    8 7fs6:B (2.241) BS04 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    9 7fs6:B (2.241) BS05 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    10 7fs6:B (2.241) BS06 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    11 7fs6:C (2.241) BS01 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    12 7fs6:C (2.241) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    13 7fs6:C (2.241) BS03 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    14 7fs6:C (2.241) BS04 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    15 7fs6:D (2.241) BS01 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    16 7fs6:D (2.241) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    17 7fs6:D (2.241) BS03 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    18 7fs6:D (2.241) BS04 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    19 7fs6:D (2.241) BS05 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    20 7fs6:D (2.241) BS06 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    21 7fs6:E (2.241) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    22 7fs6:E (2.241) BS02 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    23 7fs6:E (2.241) BS03 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    24 7fs6:E (2.241) BS04 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    25 7fs6:F (2.241) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    26 7fs6:F (2.241) BS02 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    27 7fs6:F (2.241) BS03 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    28 7fs6:F (2.241) BS04 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    29 7fs6:F (2.241) BS05 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    30 7fs6:F (2.241) BS06 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    31 7fs6:G (2.241) BS01 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    32 7fs6:G (2.241) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    33 7fs6:G (2.241) BS03 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    34 7fs6:G (2.241) BS04 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    35 7fs6:H (2.241) BS01 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    36 7fs6:H (2.241) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 36753880
    37 7fs6:H (2.241) BS03 OXL 2.7.1.40 GO:0000287 ... P30613 36753880
    38 7fs6:H (2.241) BS04 MG 2.7.1.40 GO:0000287 ... P30613 36753880
    39 7fs6:H (2.241) BS05 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    40 7fs6:H (2.241) BS06 Y3Z 2.7.1.40 GO:0000287 ... P30613 36753880
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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