Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 129 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7ddq:A (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    2 7ddq:A (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    3 7ddq:A (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    4 7ddq:B (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    5 7ddq:B (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    6 7ddq:B (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    7 7ddq:D (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    8 7ddq:D (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    9 7ddq:D (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    10 7ddq:E (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    11 7ddq:E (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    12 7ddq:E (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    13 7ddq:F (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    14 7ddq:F (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    15 7ddq:F (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    16 7ddq:G (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    17 7ddq:G (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    18 7ddq:G (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    19 7ddq:I (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    20 7ddq:I (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    21 7ddq:I (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    22 7ddq:J (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    23 7ddq:J (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    24 7ddq:J (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    25 7ddq:K (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    26 7ddq:K (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    27 7ddq:K (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    28 7ddq:L (2.84) BS01 U10 ? GO:0009772 ... A0A2T4JIS6 34134992
    29 7ddq:L (2.84) BS02 BCL ? GO:0009772 ... A0A2T4JIS6 34134992
    30 7ddq:L (2.84) BS03 BPH ? GO:0009772 ... A0A2T4JIS6 34134992
    31 7ddq:L (2.84) BS04 U10 ? GO:0009772 ... A0A2T4JIS6 34134992
    32 7ddq:L (2.84) BS05 U10 ? GO:0009772 ... A0A2T4JIS6 34134992
    33 7ddq:L (2.84) BS06 U10 ? GO:0009772 ... A0A2T4JIS6 34134992
    34 7ddq:L (2.84) BS07 BPH ? GO:0009772 ... A0A2T4JIS6 34134992
    35 7ddq:L (2.84) BS08 BCL ? GO:0009772 ... A0A2T4JIS6 34134992
    36 7ddq:L (2.84) BS09 BPH ? GO:0009772 ... A0A2T4JIS6 34134992
    37 7ddq:L (2.84) BS10 FE ? GO:0009772 ... A0A2T4JIS6 34134992
    38 7ddq:L (2.84) BS11 U10 ? GO:0009772 ... A0A2T4JIS6 34134992
    39 7ddq:L (2.84) BS12 BCL ? GO:0009772 ... A0A2T4JIS6 34134992
    40 7ddq:M (2.84) BS01 BPH ? GO:0009772 ... A0A2T4JIN0 34134992
    41 7ddq:M (2.84) BS02 BPH ? GO:0009772 ... A0A2T4JIN0 34134992
    42 7ddq:M (2.84) BS03 BCL ? GO:0009772 ... A0A2T4JIN0 34134992
    43 7ddq:M (2.84) BS04 BCL ? GO:0009772 ... A0A2T4JIN0 34134992
    44 7ddq:M (2.84) BS05 BPH ? GO:0009772 ... A0A2T4JIN0 34134992
    45 7ddq:M (2.84) BS06 FE ? GO:0009772 ... A0A2T4JIN0 34134992
    46 7ddq:M (2.84) BS07 U10 ? GO:0009772 ... A0A2T4JIN0 34134992
    47 7ddq:M (2.84) BS08 SPO ? GO:0009772 ... A0A2T4JIN0 34134992
    48 7ddq:M (2.84) BS09 BCL ? GO:0009772 ... A0A2T4JIN0 34134992
    49 7ddq:M (2.84) BS10 U10 ? GO:0009772 ... A0A2T4JIN0 34134992
    50 7ddq:N (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    51 7ddq:N (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    52 7ddq:N (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    53 7ddq:O (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    54 7ddq:O (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    55 7ddq:O (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    56 7ddq:R (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    57 7ddq:R (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    58 7ddq:R (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    59 7ddq:S (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    60 7ddq:S (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    61 7ddq:S (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    62 7ddq:T (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    63 7ddq:T (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIL7 34134992
    64 7ddq:T (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    65 7ddq:U (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    66 7ddq:U (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIL7 34134992
    67 7ddq:X (2.84) BS01 SPO ? GO:0016020 ... A0A2T4JIP3 34134992
    68 7ddq:a (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    69 7ddq:a (2.84) BS02 U10 ? GO:0005886 ... A0A2T4JIR4 34134992
    70 7ddq:a (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    71 7ddq:a (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    72 7ddq:a (2.84) BS05 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    73 7ddq:b (2.84) BS01 U10 ? GO:0005886 ... A0A2T4JIR4 34134992
    74 7ddq:b (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    75 7ddq:b (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    76 7ddq:b (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    77 7ddq:b (2.84) BS05 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    78 7ddq:b (2.84) BS06 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    79 7ddq:d (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    80 7ddq:d (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    81 7ddq:d (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    82 7ddq:d (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    83 7ddq:e (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    84 7ddq:e (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    85 7ddq:e (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    86 7ddq:e (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    87 7ddq:f (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    88 7ddq:f (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    89 7ddq:f (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    90 7ddq:f (2.84) BS04 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    91 7ddq:f (2.84) BS05 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    92 7ddq:g (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    93 7ddq:g (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    94 7ddq:g (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    95 7ddq:i (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    96 7ddq:i (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    97 7ddq:i (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    98 7ddq:i (2.84) BS04 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    99 7ddq:j (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    100 7ddq:j (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    101 7ddq:j (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    102 7ddq:j (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    103 7ddq:k (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    104 7ddq:k (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    105 7ddq:k (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    106 7ddq:k (2.84) BS04 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    107 7ddq:n (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    108 7ddq:n (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    109 7ddq:n (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    110 7ddq:n (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    111 7ddq:o (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    112 7ddq:o (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    113 7ddq:o (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    114 7ddq:o (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    115 7ddq:r (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    116 7ddq:r (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    117 7ddq:r (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    118 7ddq:r (2.84) BS04 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    119 7ddq:s (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    120 7ddq:s (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    121 7ddq:s (2.84) BS03 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    122 7ddq:s (2.84) BS04 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    123 7ddq:s (2.84) BS05 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    124 7ddq:t (2.84) BS01 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    125 7ddq:t (2.84) BS02 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    126 7ddq:t (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    127 7ddq:u (2.84) BS01 SPO ? GO:0005886 ... A0A2T4JIR4 34134992
    128 7ddq:u (2.84) BS02 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    129 7ddq:u (2.84) BS03 BCL ? GO:0005886 ... A0A2T4JIR4 34134992
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218