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BioLiP
Download all results in tab-seperated text for 45 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6v8w:A (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    2 6v8w:A (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    3 6v8w:B (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    4 6v8w:B (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    5 6v8w:C (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    6 6v8w:C (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    7 6v8w:D (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    8 6v8w:D (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    9 6v8w:E (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    10 6v8w:E (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    11 6v8w:F (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    12 6v8w:F (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    13 6v8w:G (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    14 6v8w:G (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    15 6v8w:H (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    16 6v8w:H (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    17 6v8w:I (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    18 6v8w:J (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    19 6v8w:J (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    20 6v8w:K (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    21 6v8w:L (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    22 6v8w:L (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    23 6v8w:M (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    24 6v8w:N (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    25 6v8w:N (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    26 6v8w:O (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    27 6v8w:O (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    28 6v8w:P (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    29 6v8w:P (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    30 6v8w:Q (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    31 6v8w:R (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    32 6v8w:R (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    33 6v8w:S (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    34 6v8w:T (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    35 6v8w:U (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    36 6v8w:U (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    37 6v8w:V (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    38 6v8w:W (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    39 6v8w:W (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    40 6v8w:X (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    41 6v8w:X (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    42 6v8w:Y (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    43 6v8w:Y (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    44 6v8w:Z (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    45 6v8w:Z (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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