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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 726 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 6nwa:H (3.48) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    202 6nwa:H (3.48) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    203 6nwa:I (3.48) BS01 CLA ? GO:0009522 ... Q55330 31133699
    204 6nwa:I (3.48) BS02 CLA ? GO:0009522 ... Q55330 31133699
    205 6nwa:I (3.48) BS03 CLA ? GO:0009522 ... Q55330 31133699
    206 6nwa:I (3.48) BS04 CLA ? GO:0009522 ... Q55330 31133699
    207 6nwa:I (3.48) BS05 CLA ? GO:0009522 ... Q55330 31133699
    208 6nwa:J (3.48) BS01 CLA ? GO:0009522 ... Q55329 31133699
    209 6nwa:J (3.48) BS02 CLA ? GO:0009522 ... Q55329 31133699
    210 6nwa:J (3.48) BS03 CLA ? GO:0009522 ... Q55329 31133699
    211 6nwa:J (3.48) BS04 CLA ? GO:0009522 ... Q55329 31133699
    212 6nwa:J (3.48) BS05 CLA ? GO:0009522 ... Q55329 31133699
    213 6nwa:J (3.48) BS06 CLA ? GO:0009522 ... Q55329 31133699
    214 6nwa:K (3.48) BS01 CLA ? GO:0009522 ... P72712 31133699
    215 6nwa:K (3.48) BS02 CLA ? GO:0009522 ... P72712 31133699
    216 6nwa:K (3.48) BS03 CLA ? GO:0009522 ... P72712 31133699
    217 6nwa:K (3.48) BS04 CLA ? GO:0009522 ... P72712 31133699
    218 6nwa:L (3.48) BS01 CLA ? GO:0005886 ... P37277 31133699
    219 6nwa:L (3.48) BS02 CLA ? GO:0005886 ... P37277 31133699
    220 6nwa:L (3.48) BS03 CLA ? GO:0005886 ... P37277 31133699
    221 6nwa:L (3.48) BS04 CLA ? GO:0005886 ... P37277 31133699
    222 6nwa:L (3.48) BS05 CLA ? GO:0005886 ... P37277 31133699
    223 6nwa:L (3.48) BS06 CLA ? GO:0005886 ... P37277 31133699
    224 6nwa:L (3.48) BS07 CLA ? GO:0005886 ... P37277 31133699
    225 6nwa:L (3.48) BS08 CA ? GO:0005886 ... P37277 31133699
    226 6nwa:M (3.48) BS01 CLA ? GO:0009522 ... P72986 31133699
    227 6nwa:N (3.48) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 31133699
    228 6nwa:N (3.48) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 31133699
    229 6nwa:Q (3.48) BS01 CLA ? GO:0009522 ... P29256 31133699
    230 6nwa:Q (3.48) BS02 CLA ? GO:0009522 ... P29256 31133699
    231 6nwa:Q (3.48) BS03 CLA ? GO:0009522 ... P29256 31133699
    232 6nwa:Q (3.48) BS04 CLA ? GO:0009522 ... P29256 31133699
    233 6nwa:R (3.48) BS01 CLA ? GO:0009522 ... Q55330 31133699
    234 6nwa:R (3.48) BS02 CLA ? GO:0009522 ... Q55330 31133699
    235 6nwa:R (3.48) BS03 CLA ? GO:0009522 ... Q55330 31133699
    236 6nwa:R (3.48) BS04 CLA ? GO:0009522 ... Q55330 31133699
    237 6nwa:S (3.48) BS01 CLA ? GO:0009522 ... Q55329 31133699
    238 6nwa:S (3.48) BS02 CLA ? GO:0009522 ... Q55329 31133699
    239 6nwa:S (3.48) BS03 CLA ? GO:0009522 ... Q55329 31133699
    240 6nwa:S (3.48) BS04 CLA ? GO:0009522 ... Q55329 31133699
    241 6nwa:S (3.48) BS05 CLA ? GO:0009522 ... Q55329 31133699
    242 6nwa:S (3.48) BS06 CLA ? GO:0009522 ... Q55329 31133699
    243 6nwa:T (3.48) BS01 CLA ? GO:0009522 ... P72712 31133699
    244 6nwa:T (3.48) BS02 CLA ? GO:0009522 ... P72712 31133699
    245 6nwa:T (3.48) BS03 CLA ? GO:0009522 ... P72712 31133699
    246 6nwa:U (3.48) BS01 CLA ? GO:0005886 ... P37277 31133699
    247 6nwa:U (3.48) BS02 CA ? GO:0005886 ... P37277 31133699
    248 6nwa:U (3.48) BS03 CLA ? GO:0005886 ... P37277 31133699
    249 6nwa:U (3.48) BS04 CLA ? GO:0005886 ... P37277 31133699
    250 6nwa:U (3.48) BS05 CLA ? GO:0005886 ... P37277 31133699
    251 6nwa:U (3.48) BS06 CLA ? GO:0005886 ... P37277 31133699
    252 6nwa:U (3.48) BS07 CLA ? GO:0005886 ... P37277 31133699
    253 6nwa:U (3.48) BS08 CLA ? GO:0005886 ... P37277 31133699
    254 6nwa:U (3.48) BS09 CLA ? GO:0005886 ... P37277 31133699
    255 6nwa:U (3.48) BS10 CLA ? GO:0005886 ... P37277 31133699
    256 6nwa:V (3.48) BS01 CLA ? GO:0009522 ... P72986 31133699
    257 6nwa:W (3.48) BS01 CLA ? GO:0005886 ... Q55274 31133699
    258 6nwa:W (3.48) BS02 CLA ? GO:0005886 ... Q55274 31133699
    259 6nwa:W (3.48) BS03 CLA ? GO:0005886 ... Q55274 31133699
    260 6nwa:W (3.48) BS04 CLA ? GO:0005886 ... Q55274 31133699
    261 6nwa:W (3.48) BS05 CLA ? GO:0005886 ... Q55274 31133699
    262 6nwa:W (3.48) BS06 CLA ? GO:0005886 ... Q55274 31133699
    263 6nwa:W (3.48) BS07 CLA ? GO:0005886 ... Q55274 31133699
    264 6nwa:W (3.48) BS08 CLA ? GO:0005886 ... Q55274 31133699
    265 6nwa:W (3.48) BS09 CLA ? GO:0005886 ... Q55274 31133699
    266 6nwa:W (3.48) BS10 CLA ? GO:0005886 ... Q55274 31133699
    267 6nwa:W (3.48) BS11 CLA ? GO:0005886 ... Q55274 31133699
    268 6nwa:W (3.48) BS12 CLA ? GO:0005886 ... Q55274 31133699
    269 6nwa:W (3.48) BS13 CLA ? GO:0005886 ... Q55274 31133699
    270 6nwa:W (3.48) BS14 CLA ? GO:0005886 ... Q55274 31133699
    271 6nwa:W (3.48) BS15 CLA ? GO:0005886 ... Q55274 31133699
    272 6nwa:W (3.48) BS16 CLA ? GO:0005886 ... Q55274 31133699
    273 6nwa:W (3.48) BS17 CLA ? GO:0005886 ... Q55274 31133699
    274 6nwa:W (3.48) BS18 CLA ? GO:0005886 ... Q55274 31133699
    275 6nwa:X (3.48) BS01 CLA ? GO:0005886 ... Q55274 31133699
    276 6nwa:X (3.48) BS02 CLA ? GO:0005886 ... Q55274 31133699
    277 6nwa:X (3.48) BS03 CLA ? GO:0005886 ... Q55274 31133699
    278 6nwa:X (3.48) BS04 CLA ? GO:0005886 ... Q55274 31133699
    279 6nwa:X (3.48) BS05 CLA ? GO:0005886 ... Q55274 31133699
    280 6nwa:X (3.48) BS06 CLA ? GO:0005886 ... Q55274 31133699
    281 6nwa:X (3.48) BS07 CLA ? GO:0005886 ... Q55274 31133699
    282 6nwa:X (3.48) BS08 CLA ? GO:0005886 ... Q55274 31133699
    283 6nwa:X (3.48) BS09 CLA ? GO:0005886 ... Q55274 31133699
    284 6nwa:X (3.48) BS10 CLA ? GO:0005886 ... Q55274 31133699
    285 6nwa:X (3.48) BS11 CLA ? GO:0005886 ... Q55274 31133699
    286 6nwa:X (3.48) BS12 CLA ? GO:0005886 ... Q55274 31133699
    287 6nwa:X (3.48) BS13 CLA ? GO:0005886 ... Q55274 31133699
    288 6nwa:X (3.48) BS14 CLA ? GO:0005886 ... Q55274 31133699
    289 6nwa:X (3.48) BS15 CLA ? GO:0005886 ... Q55274 31133699
    290 6nwa:X (3.48) BS16 CLA ? GO:0005886 ... Q55274 31133699
    291 6nwa:X (3.48) BS17 CLA ? GO:0005886 ... Q55274 31133699
    292 6nwa:X (3.48) BS18 CLA ? GO:0005886 ... Q55274 31133699
    293 6nwa:X (3.48) BS19 CLA ? GO:0005886 ... Q55274 31133699
    294 6nwa:Y (3.48) BS01 CLA ? GO:0005886 ... Q55274 31133699
    295 6nwa:Y (3.48) BS02 CLA ? GO:0005886 ... Q55274 31133699
    296 6nwa:Y (3.48) BS03 CLA ? GO:0005886 ... Q55274 31133699
    297 6nwa:Y (3.48) BS04 CLA ? GO:0005886 ... Q55274 31133699
    298 6nwa:Y (3.48) BS05 CLA ? GO:0005886 ... Q55274 31133699
    299 6nwa:Y (3.48) BS06 CLA ? GO:0005886 ... Q55274 31133699
    300 6nwa:Y (3.48) BS07 CLA ? GO:0005886 ... Q55274 31133699
    301 6nwa:Y (3.48) BS08 CLA ? GO:0005886 ... Q55274 31133699
    302 6nwa:Y (3.48) BS09 CLA ? GO:0005886 ... Q55274 31133699
    303 6nwa:Y (3.48) BS10 CLA ? GO:0005886 ... Q55274 31133699
    304 6nwa:Y (3.48) BS11 CLA ? GO:0005886 ... Q55274 31133699
    305 6nwa:Y (3.48) BS12 CLA ? GO:0005886 ... Q55274 31133699
    306 6nwa:Y (3.48) BS13 CLA ? GO:0005886 ... Q55274 31133699
    307 6nwa:Y (3.48) BS14 CLA ? GO:0005886 ... Q55274 31133699
    308 6nwa:Y (3.48) BS15 CLA ? GO:0005886 ... Q55274 31133699
    309 6nwa:Y (3.48) BS16 CLA ? GO:0005886 ... Q55274 31133699
    310 6nwa:Y (3.48) BS17 CLA ? GO:0005886 ... Q55274 31133699
    311 6nwa:Y (3.48) BS18 CLA ? GO:0005886 ... Q55274 31133699
    312 6nwa:Y (3.48) BS19 CLA ? GO:0005886 ... Q55274 31133699
    313 6nwa:Y (3.48) BS20 CLA ? GO:0005886 ... Q55274 31133699
    314 6nwa:Z (3.48) BS01 CLA ? GO:0005886 ... Q55274 31133699
    315 6nwa:Z (3.48) BS02 CLA ? GO:0005886 ... Q55274 31133699
    316 6nwa:Z (3.48) BS03 CLA ? GO:0005886 ... Q55274 31133699
    317 6nwa:Z (3.48) BS04 CLA ? GO:0005886 ... Q55274 31133699
    318 6nwa:Z (3.48) BS05 CLA ? GO:0005886 ... Q55274 31133699
    319 6nwa:Z (3.48) BS06 CLA ? GO:0005886 ... Q55274 31133699
    320 6nwa:Z (3.48) BS07 CLA ? GO:0005886 ... Q55274 31133699
    321 6nwa:Z (3.48) BS08 CLA ? GO:0005886 ... Q55274 31133699
    322 6nwa:Z (3.48) BS09 CLA ? GO:0005886 ... Q55274 31133699
    323 6nwa:Z (3.48) BS10 CLA ? GO:0005886 ... Q55274 31133699
    324 6nwa:Z (3.48) BS11 CLA ? GO:0005886 ... Q55274 31133699
    325 6nwa:Z (3.48) BS12 CLA ? GO:0005886 ... Q55274 31133699
    326 6nwa:Z (3.48) BS13 CLA ? GO:0005886 ... Q55274 31133699
    327 6nwa:Z (3.48) BS14 CLA ? GO:0005886 ... Q55274 31133699
    328 6nwa:Z (3.48) BS15 CLA ? GO:0005886 ... Q55274 31133699
    329 6nwa:Z (3.48) BS16 CLA ? GO:0005886 ... Q55274 31133699
    330 6nwa:Z (3.48) BS17 CLA ? GO:0005886 ... Q55274 31133699
    331 6nwa:Z (3.48) BS18 CLA ? GO:0005886 ... Q55274 31133699
    332 6nwa:Z (3.48) BS19 CLA ? GO:0005886 ... Q55274 31133699
    333 6nwa:Z (3.48) BS20 CLA ? GO:0005886 ... Q55274 31133699
    334 6nwa:a (3.48) BS01 CL0 1.97.1.12 GO:0000287 ... P29254 31133699
    335 6nwa:a (3.48) BS02 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    336 6nwa:a (3.48) BS03 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    337 6nwa:a (3.48) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    338 6nwa:a (3.48) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    339 6nwa:a (3.48) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    340 6nwa:a (3.48) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    341 6nwa:a (3.48) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    342 6nwa:a (3.48) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    343 6nwa:a (3.48) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    344 6nwa:a (3.48) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    345 6nwa:a (3.48) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    346 6nwa:a (3.48) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    347 6nwa:a (3.48) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    348 6nwa:a (3.48) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    349 6nwa:a (3.48) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    350 6nwa:a (3.48) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    351 6nwa:a (3.48) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    352 6nwa:a (3.48) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    353 6nwa:a (3.48) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    354 6nwa:a (3.48) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    355 6nwa:a (3.48) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    356 6nwa:a (3.48) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    357 6nwa:a (3.48) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    358 6nwa:a (3.48) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    359 6nwa:a (3.48) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    360 6nwa:a (3.48) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    361 6nwa:a (3.48) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    362 6nwa:a (3.48) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    363 6nwa:a (3.48) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    364 6nwa:a (3.48) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    365 6nwa:a (3.48) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    366 6nwa:a (3.48) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    367 6nwa:a (3.48) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    368 6nwa:a (3.48) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    369 6nwa:a (3.48) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    370 6nwa:a (3.48) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    371 6nwa:a (3.48) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    372 6nwa:a (3.48) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    373 6nwa:a (3.48) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    374 6nwa:a (3.48) BS41 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    375 6nwa:a (3.48) BS42 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    376 6nwa:a (3.48) BS43 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    377 6nwa:a (3.48) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    378 6nwa:a (3.48) BS45 PQN 1.97.1.12 GO:0000287 ... P29254 31133699
    379 6nwa:a (3.48) BS46 SF4 1.97.1.12 GO:0000287 ... P29254 31133699
    380 6nwa:a (3.48) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    381 6nwa:a (3.48) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    382 6nwa:a (3.48) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    383 6nwa:a (3.48) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    384 6nwa:a (3.48) BS51 CLA 1.97.1.12 GO:0000287 ... P29254 31133699
    385 6nwa:b (3.48) BS01 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    386 6nwa:b (3.48) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    387 6nwa:b (3.48) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    388 6nwa:b (3.48) BS04 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    389 6nwa:b (3.48) BS05 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    390 6nwa:b (3.48) BS06 SF4 1.97.1.12 GO:0000287 ... P29255 31133699
    391 6nwa:b (3.48) BS07 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    392 6nwa:b (3.48) BS08 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    393 6nwa:b (3.48) BS09 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    394 6nwa:b (3.48) BS10 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    395 6nwa:b (3.48) BS11 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    396 6nwa:b (3.48) BS12 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    397 6nwa:b (3.48) BS13 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    398 6nwa:b (3.48) BS14 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    399 6nwa:b (3.48) BS15 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    400 6nwa:b (3.48) BS16 CLA 1.97.1.12 GO:0000287 ... P29255 31133699
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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