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BioLiP
Download all results in tab-seperated text for 110 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6fos:2 (4.0) BS01 CLA ? GO:0009416 ... M1UU36 29582227
    2 6fos:2 (4.0) BS02 CLA ? GO:0009416 ... M1UU36 29582227
    3 6fos:2 (4.0) BS03 CLA ? GO:0009416 ... M1UU36 29582227
    4 6fos:3 (4.0) BS01 CLA ? GO:0009416 ... M1UU36 29582227
    5 6fos:3 (4.0) BS02 CLA ? GO:0009416 ... M1UU36 29582227
    6 6fos:3 (4.0) BS03 CLA ? GO:0009416 ... M1UU36 29582227
    7 6fos:3 (4.0) BS04 CLA ? GO:0009416 ... M1UU36 29582227
    8 6fos:3 (4.0) BS05 CLA ? GO:0009416 ... M1UU36 29582227
    9 6fos:3 (4.0) BS06 CLA ? GO:0009416 ... M1UU36 29582227
    10 6fos:3 (4.0) BS07 CLA ? GO:0009416 ... M1UU36 29582227
    11 6fos:3 (4.0) BS08 CLA ? GO:0009416 ... M1UU36 29582227
    12 6fos:3 (4.0) BS09 CLA ? GO:0009416 ... M1UU36 29582227
    13 6fos:4 (4.0) BS01 CLA ? GO:0009416 ... M1VKK5 29582227
    14 6fos:4 (4.0) BS02 CLA ? GO:0009416 ... M1VKK5 29582227
    15 6fos:4 (4.0) BS03 CLA ? GO:0009416 ... M1VKK5 29582227
    16 6fos:A (4.0) BS01 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    17 6fos:A (4.0) BS02 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    18 6fos:A (4.0) BS03 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    19 6fos:A (4.0) BS04 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    20 6fos:A (4.0) BS05 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    21 6fos:A (4.0) BS06 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    22 6fos:A (4.0) BS07 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    23 6fos:A (4.0) BS08 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    24 6fos:A (4.0) BS09 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    25 6fos:A (4.0) BS10 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    26 6fos:A (4.0) BS11 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    27 6fos:A (4.0) BS12 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    28 6fos:A (4.0) BS13 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    29 6fos:A (4.0) BS14 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    30 6fos:A (4.0) BS15 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    31 6fos:A (4.0) BS16 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    32 6fos:A (4.0) BS17 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    33 6fos:A (4.0) BS18 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    34 6fos:A (4.0) BS19 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    35 6fos:A (4.0) BS20 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    36 6fos:A (4.0) BS21 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    37 6fos:A (4.0) BS22 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    38 6fos:A (4.0) BS23 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    39 6fos:A (4.0) BS24 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    40 6fos:A (4.0) BS25 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    41 6fos:A (4.0) BS26 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    42 6fos:A (4.0) BS27 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    43 6fos:A (4.0) BS28 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    44 6fos:A (4.0) BS29 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    45 6fos:A (4.0) BS30 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    46 6fos:A (4.0) BS31 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    47 6fos:A (4.0) BS32 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    48 6fos:A (4.0) BS33 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    49 6fos:A (4.0) BS34 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    50 6fos:A (4.0) BS35 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    51 6fos:A (4.0) BS36 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    52 6fos:A (4.0) BS37 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    53 6fos:A (4.0) BS38 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    54 6fos:A (4.0) BS39 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    55 6fos:A (4.0) BS40 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    56 6fos:A (4.0) BS41 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    57 6fos:A (4.0) BS42 PQN 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    58 6fos:A (4.0) BS43 SF4 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    59 6fos:A (4.0) BS44 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    60 6fos:A (4.0) BS45 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    61 6fos:A (4.0) BS46 CLA 1.97.1.12 GO:0000287 ... Q85FY7 29582227
    62 6fos:B (4.0) BS01 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    63 6fos:B (4.0) BS02 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    64 6fos:B (4.0) BS03 SF4 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    65 6fos:B (4.0) BS04 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    66 6fos:B (4.0) BS05 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    67 6fos:B (4.0) BS06 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    68 6fos:B (4.0) BS07 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    69 6fos:B (4.0) BS08 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    70 6fos:B (4.0) BS09 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    71 6fos:B (4.0) BS10 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    72 6fos:B (4.0) BS11 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    73 6fos:B (4.0) BS12 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    74 6fos:B (4.0) BS13 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    75 6fos:B (4.0) BS14 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    76 6fos:B (4.0) BS15 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    77 6fos:B (4.0) BS16 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    78 6fos:B (4.0) BS17 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    79 6fos:B (4.0) BS18 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    80 6fos:B (4.0) BS19 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    81 6fos:B (4.0) BS20 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    82 6fos:B (4.0) BS21 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    83 6fos:B (4.0) BS22 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    84 6fos:B (4.0) BS23 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    85 6fos:B (4.0) BS24 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    86 6fos:B (4.0) BS25 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    87 6fos:B (4.0) BS26 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    88 6fos:B (4.0) BS27 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    89 6fos:B (4.0) BS28 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    90 6fos:B (4.0) BS29 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    91 6fos:B (4.0) BS30 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    92 6fos:B (4.0) BS31 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    93 6fos:B (4.0) BS32 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    94 6fos:B (4.0) BS33 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    95 6fos:B (4.0) BS34 CLA 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    96 6fos:B (4.0) BS35 PQN 1.97.1.12 GO:0000287 ... Q85FY6 29582227
    97 6fos:C (4.0) BS01 SF4 1.97.1.12 GO:0009055 ... Q85G47 29582227
    98 6fos:C (4.0) BS02 SF4 1.97.1.12 GO:0009055 ... Q85G47 29582227
    99 6fos:F (4.0) BS01 CLA ? GO:0009507 ... Q85FS9 29582227
    100 6fos:F (4.0) BS02 CLA ? GO:0009507 ... Q85FS9 29582227
    101 6fos:J (4.0) BS01 CLA ? GO:0009507 ... Q85FS8 29582227
    102 6fos:J (4.0) BS02 CLA ? GO:0009507 ... Q85FS8 29582227
    103 6fos:J (4.0) BS03 CLA ? GO:0009507 ... Q85FS8 29582227
    104 6fos:K (4.0) BS01 CLA ? GO:0009522 ... Q85G51 29582227
    105 6fos:K (4.0) BS02 CLA ? GO:0009522 ... Q85G51 29582227
    106 6fos:L (4.0) BS01 CLA ? GO:0009507 ... Q85FP8 29582227
    107 6fos:L (4.0) BS02 CLA ? GO:0009507 ... Q85FP8 29582227
    108 6fos:L (4.0) BS03 CLA ? GO:0009507 ... Q85FP8 29582227
    109 6fos:L (4.0) BS04 CLA ? GO:0009507 ... Q85FP8 29582227
    110 6fos:O (4.0) BS01 CLA ? N/A M1VFJ4 29582227
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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