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BioLiP
Download all results in tab-seperated text for 120 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6ezm:A (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    2 6ezm:A (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    3 6ezm:A (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    4 6ezm:A (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    5 6ezm:A (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    6 6ezm:B (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    7 6ezm:B (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8 6ezm:B (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    9 6ezm:B (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    10 6ezm:B (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    11 6ezm:C (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    12 6ezm:C (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    13 6ezm:C (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    14 6ezm:C (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    15 6ezm:C (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    16 6ezm:D (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    17 6ezm:D (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    18 6ezm:D (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    19 6ezm:D (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    20 6ezm:D (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    21 6ezm:E (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    22 6ezm:E (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    23 6ezm:E (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    24 6ezm:E (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    25 6ezm:E (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    26 6ezm:F (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    27 6ezm:F (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    28 6ezm:F (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    29 6ezm:F (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    30 6ezm:F (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    31 6ezm:G (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    32 6ezm:G (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    33 6ezm:G (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    34 6ezm:G (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    35 6ezm:G (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    36 6ezm:H (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    37 6ezm:H (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    38 6ezm:H (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    39 6ezm:H (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    40 6ezm:H (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    41 6ezm:I (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    42 6ezm:I (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    43 6ezm:I (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    44 6ezm:I (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    45 6ezm:I (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    46 6ezm:J (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    47 6ezm:J (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    48 6ezm:J (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    49 6ezm:J (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    50 6ezm:J (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    51 6ezm:K (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    52 6ezm:K (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    53 6ezm:K (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    54 6ezm:K (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    55 6ezm:K (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    56 6ezm:L (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    57 6ezm:L (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    58 6ezm:L (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    59 6ezm:L (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    60 6ezm:L (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    61 6ezm:M (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    62 6ezm:M (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    63 6ezm:M (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    64 6ezm:M (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    65 6ezm:M (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    66 6ezm:N (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    67 6ezm:N (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    68 6ezm:N (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    69 6ezm:N (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    70 6ezm:N (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    71 6ezm:O (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    72 6ezm:O (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    73 6ezm:O (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    74 6ezm:O (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    75 6ezm:O (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    76 6ezm:P (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    77 6ezm:P (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    78 6ezm:P (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    79 6ezm:P (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    80 6ezm:P (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    81 6ezm:Q (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    82 6ezm:Q (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    83 6ezm:Q (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    84 6ezm:Q (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    85 6ezm:Q (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    86 6ezm:R (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    87 6ezm:R (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    88 6ezm:R (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    89 6ezm:R (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    90 6ezm:R (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    91 6ezm:S (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    92 6ezm:S (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    93 6ezm:S (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    94 6ezm:S (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    95 6ezm:S (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    96 6ezm:T (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    97 6ezm:T (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    98 6ezm:T (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    99 6ezm:T (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    100 6ezm:T (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    101 6ezm:U (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    102 6ezm:U (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    103 6ezm:U (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    104 6ezm:U (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    105 6ezm:U (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    106 6ezm:V (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    107 6ezm:V (3.2) BS02 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    108 6ezm:V (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    109 6ezm:V (3.2) BS04 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    110 6ezm:V (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    111 6ezm:W (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    112 6ezm:W (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    113 6ezm:W (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    114 6ezm:W (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    115 6ezm:W (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    116 6ezm:X (3.2) BS01 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    117 6ezm:X (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    118 6ezm:X (3.2) BS03 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    119 6ezm:X (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    120 6ezm:X (3.2) BS05 5LD 4.2.1.19 GO:0000105 ... P06633 29434040
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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