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BioLiP
Download all results in tab-seperated text for 96 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6ezj:A (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    2 6ezj:A (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    3 6ezj:A (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    4 6ezj:A (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    5 6ezj:B (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    6 6ezj:B (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    7 6ezj:B (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8 6ezj:B (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    9 6ezj:C (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    10 6ezj:C (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    11 6ezj:C (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    12 6ezj:C (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    13 6ezj:D (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    14 6ezj:D (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    15 6ezj:D (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    16 6ezj:D (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    17 6ezj:E (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    18 6ezj:E (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    19 6ezj:E (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    20 6ezj:E (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    21 6ezj:F (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    22 6ezj:F (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    23 6ezj:F (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    24 6ezj:F (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    25 6ezj:G (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    26 6ezj:G (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    27 6ezj:G (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    28 6ezj:G (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    29 6ezj:H (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    30 6ezj:H (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    31 6ezj:H (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    32 6ezj:H (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    33 6ezj:I (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    34 6ezj:I (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    35 6ezj:I (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    36 6ezj:I (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    37 6ezj:J (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    38 6ezj:J (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    39 6ezj:J (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    40 6ezj:J (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    41 6ezj:K (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    42 6ezj:K (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    43 6ezj:K (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    44 6ezj:K (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    45 6ezj:L (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    46 6ezj:L (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    47 6ezj:L (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    48 6ezj:L (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    49 6ezj:M (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    50 6ezj:M (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    51 6ezj:M (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    52 6ezj:M (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    53 6ezj:N (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    54 6ezj:N (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    55 6ezj:N (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    56 6ezj:N (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    57 6ezj:O (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    58 6ezj:O (3.1) BS02 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    59 6ezj:O (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    60 6ezj:O (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    61 6ezj:P (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    62 6ezj:P (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    63 6ezj:P (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    64 6ezj:P (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    65 6ezj:Q (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    66 6ezj:Q (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    67 6ezj:Q (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    68 6ezj:Q (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    69 6ezj:R (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    70 6ezj:R (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    71 6ezj:R (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    72 6ezj:R (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    73 6ezj:S (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    74 6ezj:S (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    75 6ezj:S (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    76 6ezj:S (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    77 6ezj:T (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    78 6ezj:T (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    79 6ezj:T (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    80 6ezj:T (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    81 6ezj:U (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    82 6ezj:U (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    83 6ezj:U (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    84 6ezj:U (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    85 6ezj:V (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    86 6ezj:V (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    87 6ezj:V (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    88 6ezj:V (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    89 6ezj:W (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    90 6ezj:W (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    91 6ezj:W (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    92 6ezj:W (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    93 6ezj:X (3.1) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    94 6ezj:X (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    95 6ezj:X (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    96 6ezj:X (3.1) BS04 5LD 4.2.1.19 GO:0000105 ... O23346 29434040
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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