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BioLiP
Download all results in tab-seperated text for 40 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5cx1:A (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    2 5cx1:A (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    3 5cx1:B (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    4 5cx1:B (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    5 5cx1:B (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    6 5cx1:C (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    7 5cx1:C (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    8 5cx1:D (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    9 5cx1:D (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    10 5cx1:D (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    11 5cx1:E (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    12 5cx1:E (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    13 5cx1:F (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    14 5cx1:F (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    15 5cx1:F (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    16 5cx1:G (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    17 5cx1:G (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    18 5cx1:H (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    19 5cx1:H (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    20 5cx1:H (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    21 5cx1:I (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    22 5cx1:I (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    23 5cx1:J (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    24 5cx1:J (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    25 5cx1:J (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    26 5cx1:K (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    27 5cx1:K (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    28 5cx1:L (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    29 5cx1:L (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    30 5cx1:L (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    31 5cx1:M (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    32 5cx1:M (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    33 5cx1:N (1.7476) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    34 5cx1:N (1.7476) BS02 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    35 5cx1:N (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    36 5cx1:O (1.7476) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 26360912
    37 5cx1:O (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 26360912
    38 5cx1:P (1.7476) BS01 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    39 5cx1:P (1.7476) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 26360912
    40 5cx1:P (1.7476) BS03 CA 1.18.6.1 GO:0005524 ... P07329 26360912
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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