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BioLiP
Download all results in tab-seperated text for 34 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1c2y:A (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    2 1c2y:B (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    3 1c2y:B (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    4 1c2y:C (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    5 1c2y:D (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    6 1c2y:D (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    7 1c2y:E (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    8 1c2y:F (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    9 1c2y:F (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    10 1c2y:G (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    11 1c2y:H (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    12 1c2y:H (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    13 1c2y:I (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    14 1c2y:I (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    15 1c2y:J (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    16 1c2y:J (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    17 1c2y:K (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    18 1c2y:K (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    19 1c2y:L (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    20 1c2y:L (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    21 1c2y:M (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    22 1c2y:M (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    23 1c2y:N (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    24 1c2y:O (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    25 1c2y:O (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    26 1c2y:P (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    27 1c2y:P (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    28 1c2y:Q (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    29 1c2y:R (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    30 1c2y:R (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    31 1c2y:S (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    32 1c2y:S (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    33 1c2y:T (3.3) BS01 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    34 1c2y:T (3.3) BS02 LMZ 2.5.1.78 GO:0000906 ... Q9XH32 10595538
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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