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BioLiP
Download all results in tab-seperated text for 77 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 9b4h:A (3.1) BS01 FUB ? N/A A8J9H7 38552624
    2 9b4h:A (3.1) BS02 FUB ? N/A A8J9H7 38552624
    3 9b4h:A (3.1) BS03 FUB ? N/A A8J9H7 38552624
    4 9b4h:A (3.1) BS04 FUB ? N/A A8J9H7 38552624
    5 9b4h:A (3.1) BS05 FUB ? N/A A8J9H7 38552624
    6 9b4h:A (3.1) BS06 FUB ? N/A A8J9H7 38552624
    7 9b4h:A (3.1) BS07 FUB ? N/A A8J9H7 38552624
    8 9b4h:A (3.1) BS08 FUB ? N/A A8J9H7 38552624
    9 9b4h:A (3.1) BS09 FUB ? N/A A8J9H7 38552624
    10 9b4h:A (3.1) BS10 FUB ? N/A A8J9H7 38552624
    11 9b4h:A (3.1) BS11 FUB ? N/A A8J9H7 38552624
    12 9b4h:A (3.1) BS12 FUB ? N/A A8J9H7 38552624
    13 9b4h:A (3.1) BS13 FUB ? N/A A8J9H7 38552624
    14 9b4h:A (3.1) BS14 FUB ? N/A A8J9H7 38552624
    15 9b4h:A (3.1) BS15 FUB ? N/A A8J9H7 38552624
    16 9b4h:A (3.1) BS16 FUB ? N/A A8J9H7 38552624
    17 9b4h:A (3.1) BS17 FUB ? N/A A8J9H7 38552624
    18 9b4h:A (3.1) BS18 FUB ? N/A A8J9H7 38552624
    19 9b4h:A (3.1) BS19 FUB ? N/A A8J9H7 38552624
    20 9b4h:A (3.1) BS20 A1AIO ? N/A A8J9H7 38552624
    21 9b4h:A (3.1) BS21 A1AIO ? N/A A8J9H7 38552624
    22 9b4h:A (3.1) BS22 A1AIO ? N/A A8J9H7 38552624
    23 9b4h:A (3.1) BS23 A1AIO ? N/A A8J9H7 38552624
    24 9b4h:A (3.1) BS24 A1AIO ? N/A A8J9H7 38552624
    25 9b4h:A (3.1) BS25 A1AIO ? N/A A8J9H7 38552624
    26 9b4h:A (3.1) BS26 A1AIO ? N/A A8J9H7 38552624
    27 9b4h:A (3.1) BS27 A1AIO ? N/A A8J9H7 38552624
    28 9b4h:A (3.1) BS28 GLA ? N/A A8J9H7 38552624
    29 9b4h:A (3.1) BS29 GLA ? N/A A8J9H7 38552624
    30 9b4h:A (3.1) BS30 GLA ? N/A A8J9H7 38552624
    31 9b4h:A (3.1) BS31 GLA ? N/A A8J9H7 38552624
    32 9b4h:A (3.1) BS32 GLA ? N/A A8J9H7 38552624
    33 9b4h:A (3.1) BS33 GLA ? N/A A8J9H7 38552624
    34 9b4h:A (3.1) BS34 GLA ? N/A A8J9H7 38552624
    35 9b4h:A (3.1) BS35 GLA ? N/A A8J9H7 38552624
    36 9b4h:A (3.1) BS36 GLA ? N/A A8J9H7 38552624
    37 9b4h:A (3.1) BS37 GLA ? N/A A8J9H7 38552624
    38 9b4h:A (3.1) BS38 GLA ? N/A A8J9H7 38552624
    39 9b4h:B (3.1) BS01 34V ? N/A A8J9H7 38552624
    40 9b4h:B (3.1) BS02 FUB ? N/A A8J9H7 38552624
    41 9b4h:B (3.1) BS03 FUB ? N/A A8J9H7 38552624
    42 9b4h:B (3.1) BS04 FUB ? N/A A8J9H7 38552624
    43 9b4h:B (3.1) BS05 FUB ? N/A A8J9H7 38552624
    44 9b4h:B (3.1) BS06 FUB ? N/A A8J9H7 38552624
    45 9b4h:B (3.1) BS07 FUB ? N/A A8J9H7 38552624
    46 9b4h:B (3.1) BS08 FUB ? N/A A8J9H7 38552624
    47 9b4h:B (3.1) BS09 FUB ? N/A A8J9H7 38552624
    48 9b4h:B (3.1) BS10 FUB ? N/A A8J9H7 38552624
    49 9b4h:B (3.1) BS11 FUB ? N/A A8J9H7 38552624
    50 9b4h:B (3.1) BS12 FUB ? N/A A8J9H7 38552624
    51 9b4h:B (3.1) BS13 FUB ? N/A A8J9H7 38552624
    52 9b4h:B (3.1) BS14 FUB ? N/A A8J9H7 38552624
    53 9b4h:B (3.1) BS15 FUB ? N/A A8J9H7 38552624
    54 9b4h:B (3.1) BS16 FUB ? N/A A8J9H7 38552624
    55 9b4h:B (3.1) BS17 FUB ? N/A A8J9H7 38552624
    56 9b4h:B (3.1) BS18 FUB ? N/A A8J9H7 38552624
    57 9b4h:B (3.1) BS19 FUB ? N/A A8J9H7 38552624
    58 9b4h:B (3.1) BS20 FUB ? N/A A8J9H7 38552624
    59 9b4h:B (3.1) BS21 FUB ? N/A A8J9H7 38552624
    60 9b4h:B (3.1) BS22 A1AIO ? N/A A8J9H7 38552624
    61 9b4h:B (3.1) BS23 A1AIO ? N/A A8J9H7 38552624
    62 9b4h:B (3.1) BS24 A1AIO ? N/A A8J9H7 38552624
    63 9b4h:B (3.1) BS25 A1AIO ? N/A A8J9H7 38552624
    64 9b4h:B (3.1) BS26 A1AIO ? N/A A8J9H7 38552624
    65 9b4h:B (3.1) BS27 A1AIO ? N/A A8J9H7 38552624
    66 9b4h:B (3.1) BS28 A1AIO ? N/A A8J9H7 38552624
    67 9b4h:B (3.1) BS29 A1AIO ? N/A A8J9H7 38552624
    68 9b4h:B (3.1) BS30 GLA ? N/A A8J9H7 38552624
    69 9b4h:B (3.1) BS31 GLA ? N/A A8J9H7 38552624
    70 9b4h:B (3.1) BS32 GLA ? N/A A8J9H7 38552624
    71 9b4h:B (3.1) BS33 GLA ? N/A A8J9H7 38552624
    72 9b4h:B (3.1) BS34 GLA ? N/A A8J9H7 38552624
    73 9b4h:B (3.1) BS35 GLA ? N/A A8J9H7 38552624
    74 9b4h:B (3.1) BS36 GLA ? N/A A8J9H7 38552624
    75 9b4h:B (3.1) BS37 GLA ? N/A A8J9H7 38552624
    76 9b4h:B (3.1) BS38 GLA ? N/A A8J9H7 38552624
    77 9b4h:B (3.1) BS39 GLA ? N/A A8J9H7 38552624
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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