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BioLiP
Download all results in tab-seperated text for 33 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8vbb:A (3.97) BS01 BGC N/A N/A Q29XT7 N/A
    2 8vbb:A (3.97) BS02 BGC N/A N/A Q29XT7 N/A
    3 8vbb:A (3.97) BS03 BGC N/A N/A Q29XT7 N/A
    4 8vbb:A (3.97) BS04 BGC N/A N/A Q29XT7 N/A
    5 8vbb:A (3.97) BS05 BGC N/A N/A Q29XT7 N/A
    6 8vbb:A (3.97) BS06 BGC N/A N/A Q29XT7 N/A
    7 8vbb:A (3.97) BS07 BGC N/A N/A Q29XT7 N/A
    8 8vbb:A (3.97) BS08 BGC N/A N/A Q29XT7 N/A
    9 8vbb:A (3.97) BS09 BGC N/A N/A Q29XT7 N/A
    10 8vbb:A (3.97) BS10 BGC N/A N/A Q29XT7 N/A
    11 8vbb:A (3.97) BS11 BGC N/A N/A Q29XT7 N/A
    12 8vbb:A (3.97) BS12 BGC N/A N/A Q29XT7 N/A
    13 8vbb:A (3.97) BS13 BGC N/A N/A Q29XT7 N/A
    14 8vbb:A (3.97) BS14 BGC N/A N/A Q29XT7 N/A
    15 8vbb:A (3.97) BS15 BGC N/A N/A Q29XT7 N/A
    16 8vbb:A (3.97) BS16 BGC N/A N/A Q29XT7 N/A
    17 8vbb:A (3.97) BS17 BGC N/A N/A Q29XT7 N/A
    18 8vbb:A (3.97) BS18 BGC N/A N/A Q29XT7 N/A
    19 8vbb:A (3.97) BS19 BGC N/A N/A Q29XT7 N/A
    20 8vbb:A (3.97) BS20 BGC N/A N/A Q29XT7 N/A
    21 8vbb:A (3.97) BS21 BGC N/A N/A Q29XT7 N/A
    22 8vbb:A (3.97) BS22 BGC N/A N/A Q29XT7 N/A
    23 8vbb:A (3.97) BS23 BGC N/A N/A Q29XT7 N/A
    24 8vbb:A (3.97) BS24 BGC N/A N/A Q29XT7 N/A
    25 8vbb:A (3.97) BS25 BGC N/A N/A Q29XT7 N/A
    26 8vbb:A (3.97) BS26 BGC N/A N/A Q29XT7 N/A
    27 8vbb:A (3.97) BS27 BGC N/A N/A Q29XT7 N/A
    28 8vbb:A (3.97) BS28 BGC N/A N/A Q29XT7 N/A
    29 8vbb:A (3.97) BS29 BGC N/A N/A Q29XT7 N/A
    30 8vbb:A (3.97) BS30 BGC N/A N/A Q29XT7 N/A
    31 8vbb:A (3.97) BS31 BGC N/A N/A Q29XT7 N/A
    32 8vbb:A (3.97) BS32 BGC N/A N/A Q29XT7 N/A
    33 8vbb:H (3.97) BS01 BGC N/A N/A N/A N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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