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BioLiP
Download all results in tab-seperated text for 40 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7p81:A (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    2 7p81:B (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    3 7p81:B (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    4 7p81:C (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    5 7p81:D (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    6 7p81:E (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    7 7p81:E (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    8 7p81:F (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    9 7p81:F (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    10 7p81:G (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    11 7p81:H (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    12 7p81:I (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    13 7p81:I (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    14 7p81:J (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    15 7p81:K (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    16 7p81:L (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    17 7p81:L (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    18 7p81:M (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    19 7p81:M (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    20 7p81:N (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    21 7p81:O (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    22 7p81:P (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    23 7p81:P (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    24 7p81:Q (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    25 7p81:R (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    26 7p81:S (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    27 7p81:S (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    28 7p81:T (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    29 7p81:T (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    30 7p81:U (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    31 7p81:V (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    32 7p81:W (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    33 7p81:W (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    34 7p81:X (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    35 7p81:Y (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    36 7p81:Z (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    37 7p81:Z (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    38 7p81:a (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    39 7p81:a (2.79) BS02 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    40 7p81:b (2.79) BS01 peptide 3.4.21.92 GO:0004176 ... P80244 35593068
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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