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BioLiP
Download all results in tab-seperated text for 50 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4ueq:A (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    2 4ueq:A (1.7) BS02 F3S 1.12.2.1 GO:0008901 ... E1K248 25780984
    3 4ueq:A (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    4 4ueq:B (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    5 4ueq:B (1.7) BS02 F3S 1.12.2.1 GO:0008901 ... E1K248 25780984
    6 4ueq:B (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    7 4ueq:C (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    8 4ueq:C (1.7) BS02 F3S 1.12.2.1 GO:0008901 ... E1K248 25780984
    9 4ueq:C (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    10 4ueq:D (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    11 4ueq:D (1.7) BS02 F3S 1.12.2.1 GO:0008901 ... E1K248 25780984
    12 4ueq:D (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    13 4ueq:E (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    14 4ueq:E (1.7) BS02 F3S 1.12.2.1 GO:0008901 ... E1K248 25780984
    15 4ueq:E (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    16 4ueq:F (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    17 4ueq:F (1.7) BS02 F3S 1.12.2.1 GO:0008901 ... E1K248 25780984
    18 4ueq:F (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    19 4ueq:F (1.7) BS04 CO3 1.12.2.1 GO:0008901 ... E1K248 25780984
    20 4ueq:Q (1.7) BS01 F3S 1.12.2.1 GO:0008901 ... E1K247 25780984
    21 4ueq:Q (1.7) BS02 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    22 4ueq:Q (1.7) BS03 FCO 1.12.2.1 GO:0008901 ... E1K247 25780984
    23 4ueq:Q (1.7) BS04 NI 1.12.2.1 GO:0008901 ... E1K247 25780984
    24 4ueq:Q (1.7) BS05 MG 1.12.2.1 GO:0008901 ... E1K247 25780984
    25 4ueq:Q (1.7) BS06 CA 1.12.2.1 GO:0008901 ... E1K247 25780984
    26 4ueq:R (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    27 4ueq:R (1.7) BS02 FCO 1.12.2.1 GO:0008901 ... E1K247 25780984
    28 4ueq:R (1.7) BS03 NI 1.12.2.1 GO:0008901 ... E1K247 25780984
    29 4ueq:R (1.7) BS04 MG 1.12.2.1 GO:0008901 ... E1K247 25780984
    30 4ueq:R (1.7) BS05 CA 1.12.2.1 GO:0008901 ... E1K247 25780984
    31 4ueq:S (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    32 4ueq:S (1.7) BS02 FCO 1.12.2.1 GO:0008901 ... E1K247 25780984
    33 4ueq:S (1.7) BS03 NI 1.12.2.1 GO:0008901 ... E1K247 25780984
    34 4ueq:S (1.7) BS04 MG 1.12.2.1 GO:0008901 ... E1K247 25780984
    35 4ueq:S (1.7) BS05 CA 1.12.2.1 GO:0008901 ... E1K247 25780984
    36 4ueq:T (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    37 4ueq:T (1.7) BS02 FCO 1.12.2.1 GO:0008901 ... E1K247 25780984
    38 4ueq:T (1.7) BS03 NI 1.12.2.1 GO:0008901 ... E1K247 25780984
    39 4ueq:T (1.7) BS04 MG 1.12.2.1 GO:0008901 ... E1K247 25780984
    40 4ueq:T (1.7) BS05 CA 1.12.2.1 GO:0008901 ... E1K247 25780984
    41 4ueq:U (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    42 4ueq:U (1.7) BS02 FCO 1.12.2.1 GO:0008901 ... E1K247 25780984
    43 4ueq:U (1.7) BS03 NI 1.12.2.1 GO:0008901 ... E1K247 25780984
    44 4ueq:U (1.7) BS04 MG 1.12.2.1 GO:0008901 ... E1K247 25780984
    45 4ueq:U (1.7) BS05 CA 1.12.2.1 GO:0008901 ... E1K247 25780984
    46 4ueq:V (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    47 4ueq:V (1.7) BS02 FCO 1.12.2.1 GO:0008901 ... E1K247 25780984
    48 4ueq:V (1.7) BS03 NI 1.12.2.1 GO:0008901 ... E1K247 25780984
    49 4ueq:V (1.7) BS04 MG 1.12.2.1 GO:0008901 ... E1K247 25780984
    50 4ueq:V (1.7) BS05 CA 1.12.2.1 GO:0008901 ... E1K247 25780984
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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