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BioLiP
Download all results in tab-seperated text for 24 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 3k1g:A (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    2 3k1g:A (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    3 3k1g:A (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    4 3k1g:B (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    5 3k1g:B (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    6 3k1g:B (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    7 3k1g:C (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    8 3k1g:C (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    9 3k1g:C (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    10 3k1g:D (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    11 3k1g:D (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    12 3k1g:D (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    13 3k1g:E (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    14 3k1g:E (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    15 3k1g:E (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    16 3k1g:F (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    17 3k1g:F (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    18 3k1g:F (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    19 3k1g:G (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    20 3k1g:G (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    21 3k1g:G (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    22 3k1g:H (2.0) BS01 SER 5.1.1.- GO:0000287 ... Q834W6 22392983
    23 3k1g:H (2.0) BS02 TYR 5.1.1.- GO:0000287 ... Q834W6 22392983
    24 3k1g:H (2.0) BS03 MG 5.1.1.- GO:0000287 ... Q834W6 22392983
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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