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BioLiP
Download all results in tab-seperated text for 26 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1iru:1 (2.75) BS01 MG ? GO:0005839 ... Q2TBX6 12015144
    2 1iru:1 (2.75) BS02 MG ? GO:0005839 ... Q2TBX6 12015144
    3 1iru:A (2.75) BS01 MG ? GO:0000502 ... Q2YDE4 12015144
    4 1iru:B (2.75) BS01 MG ? GO:0000502 ... Q3T0Y5 12015144
    5 1iru:C (2.75) BS01 MG ? GO:0000502 ... Q3ZCK9 12015144
    6 1iru:D (2.75) BS01 MG ? GO:0000502 ... Q3ZBG0 12015144
    7 1iru:G (2.75) BS01 MG ? GO:0000502 ... Q58DU5 12015144
    8 1iru:G (2.75) BS02 MG ? GO:0000502 ... Q58DU5 12015144
    9 1iru:I (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q2TBP0 12015144
    10 1iru:J (2.75) BS01 MG ? GO:0000502 ... P33672 12015144
    11 1iru:J (2.75) BS02 MG ? GO:0000502 ... P33672 12015144
    12 1iru:K (2.75) BS01 MG ? GO:0000502 ... Q5E9K0 12015144
    13 1iru:L (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q32KL2 12015144
    14 1iru:M (2.75) BS01 MG ? GO:0005839 ... Q2TBX6 12015144
    15 1iru:M (2.75) BS02 MG ? GO:0005839 ... Q2TBX6 12015144
    16 1iru:O (2.75) BS01 MG ? GO:0000502 ... Q2YDE4 12015144
    17 1iru:P (2.75) BS01 MG ? GO:0000502 ... Q3T0Y5 12015144
    18 1iru:Q (2.75) BS01 MG ? GO:0000502 ... Q3ZCK9 12015144
    19 1iru:R (2.75) BS01 MG ? GO:0000502 ... Q3ZBG0 12015144
    20 1iru:U (2.75) BS01 MG ? GO:0000502 ... Q58DU5 12015144
    21 1iru:U (2.75) BS02 MG ? GO:0000502 ... Q58DU5 12015144
    22 1iru:W (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q2TBP0 12015144
    23 1iru:X (2.75) BS01 MG ? GO:0000502 ... P33672 12015144
    24 1iru:X (2.75) BS02 MG ? GO:0000502 ... P33672 12015144
    25 1iru:Y (2.75) BS01 MG ? GO:0000502 ... Q5E9K0 12015144
    26 1iru:Z (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q32KL2 12015144
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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