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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 167 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8a22:AA (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    2 8a22:AB (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    3 8a22:AB (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    4 8a22:AB (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    5 8a22:AC (2.91) BS01 rna N/A N/A N/A 36253367
    6 8a22:AC (2.91) BS02 rna N/A N/A N/A 36253367
    7 8a22:AC (2.91) BS03 rna N/A N/A N/A 36253367
    8 8a22:AC (2.91) BS04 rna N/A N/A N/A 36253367
    9 8a22:AC (2.91) BS05 rna N/A N/A N/A 36253367
    10 8a22:AD (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    11 8a22:AD (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    12 8a22:AD (2.91) BS03 ZN N/A GO:0003735 ... N/A 36253367
    13 8a22:AE (2.91) BS01 rna N/A N/A N/A 36253367
    14 8a22:AF (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    15 8a22:AF (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    16 8a22:AG (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    17 8a22:AI (2.91) BS01 rna N/A N/A N/A 36253367
    18 8a22:AI (2.91) BS02 rna N/A N/A N/A 36253367
    19 8a22:AI (2.91) BS03 rna N/A N/A N/A 36253367
    20 8a22:AJ (2.91) BS01 rna N/A N/A N/A 36253367
    21 8a22:AK (2.91) BS01 rna N/A N/A N/A 36253367
    22 8a22:AK (2.91) BS02 rna N/A N/A N/A 36253367
    23 8a22:AL (2.91) BS01 rna N/A N/A N/A 36253367
    24 8a22:AM (2.91) BS01 rna N/A N/A N/A 36253367
    25 8a22:AM (2.91) BS02 rna N/A N/A N/A 36253367
    26 8a22:AM (2.91) BS03 rna N/A N/A N/A 36253367
    27 8a22:AM (2.91) BS04 rna N/A N/A N/A 36253367
    28 8a22:AN (2.91) BS01 rna N/A N/A N/A 36253367
    29 8a22:AN (2.91) BS02 rna N/A N/A N/A 36253367
    30 8a22:AO (2.91) BS01 rna N/A N/A N/A 36253367
    31 8a22:Aa (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    32 8a22:Aa (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    33 8a22:Aa (2.91) BS03 rna N/A GO:0003723 ... N/A 36253367
    34 8a22:Aa (2.91) BS04 rna N/A GO:0003723 ... N/A 36253367
    35 8a22:Ab (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    36 8a22:Ab (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    37 8a22:Ac (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    38 8a22:Ac (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    39 8a22:Ac (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    40 8a22:Ac (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    41 8a22:Ac (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    42 8a22:Ac (2.91) BS06 rna N/A GO:0003735 ... N/A 36253367
    43 8a22:Ad (2.91) BS01 rna N/A N/A N/A 36253367
    44 8a22:Ae (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    45 8a22:Ah (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    46 8a22:Ah (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    47 8a22:Ah (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    48 8a22:Ah (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    49 8a22:Ai (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    50 8a22:Ai (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    51 8a22:Aj (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    52 8a22:Aj (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    53 8a22:Aj (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    54 8a22:Aj (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    55 8a22:Aj (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    56 8a22:Ak (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    57 8a22:Ak (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    58 8a22:Ak (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    59 8a22:Ak (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    60 8a22:Ak (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    61 8a22:Ak (2.91) BS06 rna N/A GO:0003735 ... N/A 36253367
    62 8a22:Al (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    63 8a22:Al (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    64 8a22:Al (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    65 8a22:Am (2.91) BS01 rna N/A N/A N/A 36253367
    66 8a22:Am (2.91) BS02 rna N/A N/A N/A 36253367
    67 8a22:An (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    68 8a22:Ao (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    69 8a22:Ao (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    70 8a22:Ao (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    71 8a22:Ao (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    72 8a22:Ap (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    73 8a22:Ap (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    74 8a22:Ap (2.91) BS03 rna N/A GO:0003723 ... N/A 36253367
    75 8a22:Ap (2.91) BS04 rna N/A GO:0003723 ... N/A 36253367
    76 8a22:Ap (2.91) BS05 rna N/A GO:0003723 ... N/A 36253367
    77 8a22:Aq (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    78 8a22:Aq (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    79 8a22:Aq (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    80 8a22:Aq (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    81 8a22:Aq (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    82 8a22:Aq (2.91) BS06 peptide N/A GO:0003735 ... N/A 36253367
    83 8a22:Ar (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    84 8a22:Ar (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    85 8a22:Ar (2.91) BS03 peptide N/A GO:0003735 ... N/A 36253367
    86 8a22:At (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    87 8a22:Au (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    88 8a22:Au (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    89 8a22:Av (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    90 8a22:Ax (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    91 8a22:Ax (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    92 8a22:Ax (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    93 8a22:Az (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    94 8a22:Az (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    95 8a22:Az (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    96 8a22:Az (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    97 8a22:BB (2.91) BS01 rna N/A N/A N/A 36253367
    98 8a22:BB (2.91) BS02 rna N/A N/A N/A 36253367
    99 8a22:BC (2.91) BS01 rna N/A N/A N/A 36253367
    100 8a22:BC (2.91) BS02 rna N/A N/A N/A 36253367
    101 8a22:BC (2.91) BS03 rna N/A N/A N/A 36253367
    102 8a22:BD (2.91) BS01 rna N/A N/A N/A 36253367
    103 8a22:BE (2.91) BS01 rna N/A N/A N/A 36253367
    104 8a22:BF (2.91) BS01 rna N/A N/A N/A 36253367
    105 8a22:BF (2.91) BS02 rna N/A N/A N/A 36253367
    106 8a22:BF (2.91) BS03 rna N/A N/A N/A 36253367
    107 8a22:Ba (2.91) BS01 peptide N/A N/A N/A 36253367
    108 8a22:Ba (2.91) BS02 peptide N/A N/A N/A 36253367
    109 8a22:Bc (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    110 8a22:Bd (2.91) BS01 rna N/A N/A N/A 36253367
    111 8a22:Bd (2.91) BS02 rna N/A N/A N/A 36253367
    112 8a22:Be (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    113 8a22:Be (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    114 8a22:Be (2.91) BS03 rna N/A GO:0003723 ... N/A 36253367
    115 8a22:Be (2.91) BS04 rna N/A GO:0003723 ... N/A 36253367
    116 8a22:Bf (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    117 8a22:Bg (2.91) BS01 rna N/A GO:0006412 ... N/A 36253367
    118 8a22:Bh (2.91) BS01 rna N/A N/A N/A 36253367
    119 8a22:Bh (2.91) BS02 rna N/A N/A N/A 36253367
    120 8a22:Bh (2.91) BS03 rna N/A N/A N/A 36253367
    121 8a22:Bi (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    122 8a22:Bi (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    123 8a22:Bj (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    124 8a22:Bj (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    125 8a22:Bk (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    126 8a22:Bk (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    127 8a22:Bl (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    128 8a22:Bl (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    129 8a22:Bl (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    130 8a22:Bm (2.91) BS01 rna N/A GO:0003676 ... N/A 36253367
    131 8a22:Bm (2.91) BS02 rna N/A GO:0003676 ... N/A 36253367
    132 8a22:Bm (2.91) BS03 MG N/A GO:0003676 ... N/A 36253367
    133 8a22:Bn (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    134 8a22:Bn (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    135 8a22:Bo (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    136 8a22:Bp (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    137 8a22:Bq (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    138 8a22:Bq (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    139 8a22:Bq (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    140 8a22:Br (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    141 8a22:Bs (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    142 8a22:Bs (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    143 8a22:Bt (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    144 8a22:Bu (2.91) BS01 peptide N/A N/A N/A 36253367
    145 8a22:Bv (2.91) BS01 rna N/A N/A N/A 36253367
    146 8a22:Bv (2.91) BS02 rna N/A N/A N/A 36253367
    147 8a22:Bw (2.91) BS01 rna N/A N/A N/A 36253367
    148 8a22:Bw (2.91) BS02 ATP N/A N/A N/A 36253367
    149 8a22:By (2.91) BS01 rna N/A N/A N/A 36253367
    150 8a22:Bz (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    151 8a22:Bz (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    152 8a22:Xa (2.91) BS01 rna N/A N/A N/A 36253367
    153 8a22:Xb (2.91) BS01 rna N/A N/A N/A 36253367
    154 8a22:Xc (2.91) BS01 rna N/A N/A N/A 36253367
    155 8a22:Xd (2.91) BS01 rna N/A N/A N/A 36253367
    156 8a22:Xd (2.91) BS02 rna N/A N/A N/A 36253367
    157 8a22:Xe (2.91) BS01 rna N/A N/A N/A 36253367
    158 8a22:Xe (2.91) BS02 rna N/A N/A N/A 36253367
    159 8a22:Xe (2.91) BS03 rna N/A N/A N/A 36253367
    160 8a22:Xf (2.91) BS01 rna N/A N/A N/A 36253367
    161 8a22:Xg (2.91) BS01 rna N/A N/A N/A 36253367
    162 8a22:Xg (2.91) BS02 rna N/A N/A N/A 36253367
    163 8a22:Ya (2.91) BS01 rna N/A N/A N/A 36253367
    164 8a22:Ya (2.91) BS02 rna N/A N/A N/A 36253367
    165 8a22:Yd (2.91) BS01 rna N/A N/A N/A 36253367
    166 8a22:Ye (2.91) BS01 rna N/A N/A N/A 36253367
    167 8a22:Yl (2.91) BS01 rna N/A N/A N/A 36253367
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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