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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7xvf:A (2.8) BS01 Y01 ? GO:0001518 ... Q15858 35878056
    2 7xvf:A (2.8) BS02 CLR ? GO:0001518 ... Q15858 35878056
    3 7xvf:A (2.8) BS03 LPE ? GO:0001518 ... Q15858 35878056
    4 7xvf:A (2.8) BS04 LPE ? GO:0001518 ... Q15858 35878056
    5 7xvf:A (2.8) BS05 1PW ? GO:0001518 ... Q15858 35878056
    6 7xvf:A (2.8) BS06 LPE ? GO:0001518 ... Q15858 35878056
    7 7xvf:A (2.8) BS07 LPE ? GO:0001518 ... Q15858 35878056
    8 7xvf:A (2.8) BS08 LPE ? GO:0001518 ... Q15858 35878056
    9 7xvf:A (2.8) BS09 LPE ? GO:0001518 ... Q15858 35878056
    10 7xvf:A (2.8) BS10 LPE ? GO:0001518 ... Q15858 35878056
    11 7xvf:A (2.8) BS11 LPE ? GO:0001518 ... Q15858 35878056
    12 7xvf:A (2.8) BS12 Y01 ? GO:0001518 ... Q15858 35878056
    13 7xvf:A (2.8) BS13 Y01 ? GO:0001518 ... Q15858 35878056
    14 7xvf:A (2.8) BS14 Y01 ? GO:0001518 ... Q15858 35878056
    15 7xvf:A (2.8) BS15 LPE ? GO:0001518 ... Q15858 35878056
    16 7xvf:A (2.8) BS16 LPE ? GO:0001518 ... Q15858 35878056
    17 7xvf:A (2.8) BS17 LPE ? GO:0001518 ... Q15858 35878056
    18 7xvf:A (2.8) BS18 LPE ? GO:0001518 ... Q15858 35878056
    19 7xvf:B (2.8) BS01 LPE ? GO:0001518 ... Q07699 35878056
    20 7xvf:B (2.8) BS02 LPE ? GO:0001518 ... Q07699 35878056
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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