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BioLiP
Download all results in tab-seperated text for 48 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7pf1:A (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    2 7pf1:A (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    3 7pf1:B (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    4 7pf1:B (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    5 7pf1:C (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    6 7pf1:C (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    7 7pf1:D (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    8 7pf1:D (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    9 7pf1:E (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    10 7pf1:E (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    11 7pf1:F (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    12 7pf1:F (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    13 7pf1:G (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    14 7pf1:G (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    15 7pf1:H (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    16 7pf1:H (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    17 7pf1:I (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    18 7pf1:I (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    19 7pf1:J (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    20 7pf1:J (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    21 7pf1:K (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    22 7pf1:K (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    23 7pf1:L (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    24 7pf1:L (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    25 7pf1:M (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    26 7pf1:M (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    27 7pf1:N (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    28 7pf1:N (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    29 7pf1:O (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    30 7pf1:O (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    31 7pf1:P (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    32 7pf1:P (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    33 7pf1:Q (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    34 7pf1:Q (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    35 7pf1:R (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    36 7pf1:R (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    37 7pf1:S (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    38 7pf1:S (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    39 7pf1:T (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    40 7pf1:T (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    41 7pf1:U (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    42 7pf1:U (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    43 7pf1:V (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    44 7pf1:V (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    45 7pf1:W (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    46 7pf1:W (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    47 7pf1:X (2.1) BS01 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    48 7pf1:X (2.1) BS02 MG 1.16.3.1 GO:0004322 ... P02794 35017666
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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