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BioLiP
Download all results in tab-seperated text for 31 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2zjq:2 (3.3) BS01 rna ? GO:0003735 ... Q9RSH2 18406324
    2 2zjq:3 (3.3) BS01 rna ? GO:0003735 ... Q9RSW6 18406324
    3 2zjq:4 (3.3) BS01 rna ? GO:0003735 ... Q9RSK0 18406324
    4 2zjq:A (3.3) BS01 rna ? GO:0002181 ... Q9RXJ9 18406324
    5 2zjq:B (3.3) BS01 rna ? GO:0003735 ... Q9RXK2 18406324
    6 2zjq:C (3.3) BS01 rna ? GO:0003735 ... Q9RXK1 18406324
    7 2zjq:D (3.3) BS01 rna ? GO:0000049 ... Q9RXJ0 18406324
    8 2zjq:D (3.3) BS02 rna ? GO:0000049 ... Q9RXJ0 18406324
    9 2zjq:E (3.3) BS01 rna ? GO:0002181 ... Q9RSL3 18406324
    10 2zjq:F (3.3) BS01 rna ? GO:0003735 ... Q9RSS7 18406324
    11 2zjq:G (3.3) BS01 rna ? GO:0003729 ... Q9RXY1 18406324
    12 2zjq:H (3.3) BS01 rna ? GO:0003735 ... Q9RXJ2 18406324
    13 2zjq:I (3.3) BS01 rna ? GO:0003735 ... Q9RSK9 18406324
    14 2zjq:J (3.3) BS01 rna ? GO:0000049 ... Q9RXJ5 18406324
    15 2zjq:J (3.3) BS02 rna ? GO:0000049 ... Q9RXJ5 18406324
    16 2zjq:K (3.3) BS01 rna ? GO:0003735 ... Q9RSJ5 18406324
    17 2zjq:L (3.3) BS01 rna ? GO:0003735 ... Q9RSL2 18406324
    18 2zjq:L (3.3) BS02 rna ? GO:0003735 ... Q9RSL2 18406324
    19 2zjq:M (3.3) BS01 rna ? GO:0003735 ... Q9RWB4 18406324
    20 2zjq:N (3.3) BS01 rna ? GO:0000027 ... Q9RSW7 18406324
    21 2zjq:O (3.3) BS01 rna ? GO:0003723 ... Q9RY64 18406324
    22 2zjq:P (3.3) BS01 rna ? GO:0003735 ... Q9RXJ7 18406324
    23 2zjq:Q (3.3) BS01 rna ? GO:0000027 ... Q9RXK0 18406324
    24 2zjq:R (3.3) BS01 rna ? GO:0003723 ... Q9RXJ1 18406324
    25 2zjq:S (3.3) BS01 rna ? GO:0000049 ... Q9RX88 18406324
    26 2zjq:S (3.3) BS02 rna ? GO:0000049 ... Q9RX88 18406324
    27 2zjq:T (3.3) BS01 rna ? GO:0000049 ... Q9RY65 18406324
    28 2zjq:U (3.3) BS01 rna ? GO:0003735 ... Q9RRG8 18406324
    29 2zjq:V (3.3) BS01 rna ? GO:0003735 ... Q9RXJ4 18406324
    30 2zjq:W (3.3) BS01 rna ? GO:0003735 ... Q9RSL0 18406324
    31 2zjq:Z (3.3) BS01 rna ? GO:0003735 ... P49228 18406324
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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