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BioLiP
Download all results in tab-seperated text for 59 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2x86:A (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    2 2x86:A (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    3 2x86:A (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    4 2x86:B (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    5 2x86:B (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    6 2x86:C (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    7 2x86:C (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    8 2x86:C (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    9 2x86:D (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    10 2x86:D (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    11 2x86:D (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    12 2x86:E (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    13 2x86:E (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    14 2x86:E (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    15 2x86:F (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    16 2x86:F (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    17 2x86:F (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    18 2x86:G (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    19 2x86:G (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    20 2x86:G (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    21 2x86:H (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    22 2x86:H (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    23 2x86:H (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    24 2x86:I (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    25 2x86:I (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    26 2x86:I (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    27 2x86:J (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    28 2x86:J (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    29 2x86:J (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    30 2x86:K (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    31 2x86:K (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    32 2x86:K (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    33 2x86:L (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    34 2x86:L (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    35 2x86:L (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    36 2x86:M (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    37 2x86:M (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    38 2x86:M (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    39 2x86:N (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    40 2x86:N (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    41 2x86:N (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    42 2x86:O (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    43 2x86:O (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    44 2x86:O (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    45 2x86:P (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    46 2x86:P (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    47 2x86:P (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    48 2x86:Q (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    49 2x86:Q (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    50 2x86:Q (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    51 2x86:R (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    52 2x86:R (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    53 2x86:R (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    54 2x86:S (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    55 2x86:S (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    56 2x86:S (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    57 2x86:T (2.8) BS01 NAP 5.1.3.20 GO:0005975 ... P67911 20506248
    58 2x86:T (2.8) BS02 ADP 5.1.3.20 GO:0005975 ... P67911 20506248
    59 2x86:T (2.8) BS03 BMA 5.1.3.20 GO:0005975 ... P67911 20506248
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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