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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1t36:A (2.1) BS01 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    2 1t36:A (2.1) BS02 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    3 1t36:A (2.1) BS03 PO4 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    4 1t36:A (2.1) BS04 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    5 1t36:A (2.1) BS05 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    6 1t36:A (2.1) BS06 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    7 1t36:A (2.1) BS07 ORN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    8 1t36:A (2.1) BS08 U 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282 MOAD: Kd=9uM
    9 1t36:C (2.1) BS01 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    10 1t36:C (2.1) BS02 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    11 1t36:C (2.1) BS03 PO4 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    12 1t36:C (2.1) BS04 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    13 1t36:C (2.1) BS05 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    14 1t36:C (2.1) BS06 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    15 1t36:C (2.1) BS07 ORN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    16 1t36:C (2.1) BS08 U 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282 MOAD: Kd=9uM
    17 1t36:E (2.1) BS01 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    18 1t36:E (2.1) BS02 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    19 1t36:E (2.1) BS03 PO4 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    20 1t36:E (2.1) BS04 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    21 1t36:E (2.1) BS05 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    22 1t36:E (2.1) BS06 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    23 1t36:E (2.1) BS07 ORN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    24 1t36:E (2.1) BS08 U 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282 MOAD: Kd=9uM
    25 1t36:G (2.1) BS01 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    26 1t36:G (2.1) BS02 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    27 1t36:G (2.1) BS03 PO4 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    28 1t36:G (2.1) BS04 MN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    29 1t36:G (2.1) BS05 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    30 1t36:G (2.1) BS06 ADP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    31 1t36:G (2.1) BS07 ORN 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282
    32 1t36:G (2.1) BS08 U 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 15322282 MOAD: Kd=9uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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