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BioLiP
Download all results in tab-seperated text for 160800 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		RNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    151101 8r09:4f
    (4.3)    		 BS01 >8r09:4 (identical to 8r0b:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000387 ... P62306 38778104
    151102 8r09:4g
    (4.3)    		 BS01 >8r09:4 (identical to 8r0b:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62308 38778104
    151103 8r09:51
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000243 ... P62314 38778104
    151104 8r09:52
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P62316 38778104
    151105 8r09:53
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000243 ... P62318 38778104
    151106 8r09:5b
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000387 ... P14678 38778104
    151107 8r09:5e
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P62304 38778104
    151108 8r09:5f
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000387 ... P62306 38778104
    151109 8r09:5g
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P62308 38778104
    151110 8r09:63
    (4.3)    		 BS01 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000398 ... P62310 38778104
    151111 8r09:68
    (4.3)    		 BS01 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000398 ... O95777 38778104
    151112 8r09:7
    (4.3)    		 BS01 >8r09:4 (identical to 8r0b:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000389 ... Q15459 38778104
    151113 8r09:7
    (4.3)    		 BS02 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000389 ... Q15459 38778104
    151114 8r09:A
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151115 8r09:A
    (4.3)    		 BS02 >8r09:z (identical to 8qoz:z, 8qpe:z1, 8qpk:z, 8qzs:z1, 8r0a:z)
    aagguaaguau
...........
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151116 8r09:A
    (4.3)    		 BS03 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151117 8r09:B1
    (4.3)    		 BS01 >8r09:Z (identical to 8qxd:Z, 8qzs:Z, 8r08:Z, 8r0a:Z, 8r0b:Z, 8rm5:Z)
    gaugucauacuuauc
...............
    		 ? GO:0000245 ... O75533 38778104
    151118 8r09:B1
    (4.3)    		 BS02 >8r09:2 (identical to 8r0b:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
................................<<<<.<....>.>>>>..
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... O75533 38778104
    151119 8r09:B6
    (4.3)    		 BS01 >8r09:2 (identical to 8r0b:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
................................<<<<.<....>.>>>>..
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... Q9Y3B4 38778104
    151120 8r09:D
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P83876 38778104
    151121 8r09:D
    (4.3)    		 BS02 >8r09:z (identical to 8qoz:z, 8qpe:z1, 8qpk:z, 8qzs:z1, 8r0a:z)
    aagguaaguau
...........
    		 ? GO:0000245 ... P83876 38778104
    151122 8r09:E
    (4.3)    		 BS01 >8r09:5 (identical to 8r0b:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000375 ... Q96DI7 38778104
    151123 8r09:J
    (4.3)    		 BS01 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000244 ... O43395 38778104
    151124 8r09:L
    (4.3)    		 BS01 >8r09:4 (identical to 8r0b:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000244 ... Q8WWY3 38778104
    151125 8r09:L
    (4.3)    		 BS02 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000244 ... Q8WWY3 38778104
    151126 8r09:M
    (4.3)    		 BS01 >8r09:4 (identical to 8r0b:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000398 ... P55769 38778104
    151127 8r09:N
    (4.3)    		 BS01 >8r09:4 (identical to 8r0b:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000244 ... O94906 38778104
    151128 8r09:N
    (4.3)    		 BS02 >8r09:6 (identical to 8r0b:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000244 ... O94906 38778104
    151129 8r0a:21
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000243 ... P62314 38778104
    151130 8r0a:22
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... P62316 38778104
    151131 8r0a:23
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000243 ... P62318 38778104
    151132 8r0a:2B
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... P08579 38778104
    151133 8r0a:2e
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... P62304 38778104
    151134 8r0a:2f
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000387 ... P62306 38778104
    151135 8r0a:2g
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... P62308 38778104
    151136 8r0a:41
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000243 ... P62314 38778104
    151137 8r0a:42
    (5.8)    		 BS02 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62316 38778104
    151138 8r0a:43
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000243 ... P62318 38778104
    151139 8r0a:4e
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62304 38778104
    151140 8r0a:4f
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000387 ... P62306 38778104
    151141 8r0a:4g
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62308 38778104
    151142 8r0a:51
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000243 ... P62314 38778104
    151143 8r0a:52
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000245 ... P62316 38778104
    151144 8r0a:53
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000243 ... P62318 38778104
    151145 8r0a:5b
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000387 ... P14678 38778104
    151146 8r0a:5e
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000245 ... P62304 38778104
    151147 8r0a:5f
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000387 ... P62306 38778104
    151148 8r0a:5g
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000245 ... P62308 38778104
    151149 8r0a:63
    (5.8)    		 BS01 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000398 ... P62310 38778104
    151150 8r0a:68
    (5.8)    		 BS01 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000398 ... O95777 38778104
    151151 8r0a:8
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... Q15428 38778104
    151152 8r0a:A
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151153 8r0a:A
    (5.8)    		 BS03 >8r0a:z (identical to 8qoz:z, 8qpe:z1, 8qpk:z, 8qzs:z1, 8r09:z)
    aagguaaguau
...........
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151154 8r0a:A
    (5.8)    		 BS04 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151155 8r0a:B1
    (5.8)    		 BS01 >8r0a:Z (identical to 8qxd:Z, 8qzs:Z, 8r08:Z, 8r09:Z, 8r0b:Z, 8rm5:Z)
    gaugucauacuuauc
...............
    		 ? GO:0000245 ... O75533 38778104
    151156 8r0a:B1
    (5.8)    		 BS02 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... O75533 38778104
    151157 8r0a:B2
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... Q13435 38778104
    151158 8r0a:B6
    (5.8)    		 BS01 >8r0a:2 (identical to 8r08:2)
    cgcuucucggcaaguguaguaucuguucuuaucaguuuaauaucugaugg
auuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
..............................<<<<<.<....>.>>>>>..
.........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... Q9Y3B4 38778104
    151159 8r0a:D
    (5.8)    		 BS01 >8r0a:5 (identical to 6ah0:B, 6ahd:B, 8h6k:5A, 8h6l:5A, 8q7n:5, 8qo9:5, 8qpe:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuaacccaauuuuuugaggccuu
gcuuuggcaaggcua
..<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>....................<<<<<<
<<....>>>>>>>>.
    		 ? GO:0000245 ... P83876 38778104
    151160 8r0a:D
    (5.8)    		 BS02 >8r0a:z (identical to 8qoz:z, 8qpe:z1, 8qpk:z, 8qzs:z1, 8r09:z)
    aagguaaguau
...........
    		 ? GO:0000245 ... P83876 38778104
    151161 8r0a:D
    (5.8)    		 BS03 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000245 ... P83876 38778104
    151162 8r0a:J
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000244 ... O43395 38778104
    151163 8r0a:J
    (5.8)    		 BS02 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000244 ... O43395 38778104
    151164 8r0a:L
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000244 ... Q8WWY3 38778104
    151165 8r0a:L
    (5.8)    		 BS02 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000244 ... Q8WWY3 38778104
    151166 8r0a:M
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000398 ... P55769 38778104
    151167 8r0a:M
    (5.8)    		 BS02 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000398 ... P55769 38778104
    151168 8r0a:R
    (5.8)    		 BS01 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000398 ... Q9BTD8 38778104
    151169 8r0a:R
    (5.8)    		 BS02 >8r0a:6
    uuggaauacagagaagauuagcauggccccugcgcaaggaugauucguga
agcgauuuu
..................................................
.........
    		 ? GO:0000398 ... Q9BTD8 38778104
    151170 8r0a:S
    (5.8)    		 BS02 >8r0a:4 (identical to 8qxd:4, 8r08:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuugcuaauugaaaacuucccaauagccgugacgacuagucggcacugg
caauuuuugacagucucgagacug
....................<<<<.<<..................>>>>>
>.........................<<<<<<.<<<<..>>>>.>>>.>>
>.........<<<<<<<>>>>>>>
    		 ? GO:0000387 ... O43290 38778104
    151171 8r0b:21
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000243 ... P62314 38778104
    151172 8r0b:22
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... P62316 38778104
    151173 8r0b:23
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000243 ... P62318 38778104
    151174 8r0b:2B
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... P08579 38778104
    151175 8r0b:2f
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000387 ... P62306 38778104
    151176 8r0b:2g
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... P62308 38778104
    151177 8r0b:41
    (4.4)    		 BS01 >8r0b:4 (identical to 8r09:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000243 ... P62314 38778104
    151178 8r0b:42
    (4.4)    		 BS01 >8r0b:4 (identical to 8r09:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62316 38778104
    151179 8r0b:43
    (4.4)    		 BS01 >8r0b:4 (identical to 8r09:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000243 ... P62318 38778104
    151180 8r0b:4e
    (4.4)    		 BS01 >8r0b:4 (identical to 8r09:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62304 38778104
    151181 8r0b:4f
    (4.4)    		 BS01 >8r0b:4 (identical to 8r09:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000387 ... P62306 38778104
    151182 8r0b:4g
    (4.4)    		 BS01 >8r0b:4 (identical to 8r09:4)
    agcuuugcgcaguggcaguaucguagccaaugaggucuauccgaggcgcg
auuauugcuaauugaaaacuuuucccaauagccgugacgacuagucggca
cuggcaauuuuugacagucucgagacug
...................<<<<<.<<<.....<<.....>>..>>>>>>
>>............................<<<<<<.<<<<..>>>>.>>
>.>>>.........<<<<<<<>>>>>>>
    		 ? GO:0000245 ... P62308 38778104
    151183 8r0b:51
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000243 ... P62314 38778104
    151184 8r0b:52
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P62316 38778104
    151185 8r0b:53
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000243 ... P62318 38778104
    151186 8r0b:5b
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000387 ... P14678 38778104
    151187 8r0b:5e
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P62304 38778104
    151188 8r0b:5f
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000387 ... P62306 38778104
    151189 8r0b:5g
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000245 ... P62308 38778104
    151190 8r0b:63
    (4.4)    		 BS01 >8r0b:6 (identical to 8r09:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000398 ... P62310 38778104
    151191 8r0b:68
    (4.4)    		 BS01 >8r0b:6 (identical to 8r09:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000398 ... O95777 38778104
    151192 8r0b:7
    (4.4)    		 BS01 >8r0b:6 (identical to 8r09:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000389 ... Q15459 38778104
    151193 8r0b:8
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... Q15428 38778104
    151194 8r0b:A
    (4.4)    		 BS01 >8r0b:5 (identical to 8r09:5, 8rm5:5)
    acucugguuucucuucagaucgcauaaaucuuucgccuuuuacuaaagau
uuccguggagaggaacaacucugagucuuccaauuuuuugaggccuugcu
uuggcaaggcua
.<<<...<<<<<<<<<<........<<<<<<<<...........>>>>>>
>>...>>>>>>>>>>.......>>>................<<<<<<<<.
...>>>>>>>>.
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151195 8r0b:A
    (4.4)    		 BS02 >8r0b:6 (identical to 8r09:6)
    uuggaacgauacagagaagauuagcauggccccugcgcaaggaugacauu
cgugaagcguauuuu
..................................................
...............
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151196 8r0b:A
    (4.4)    		 BS03 >8r0b:z (identical to 8qpb:z)
    aguggguaagagc
.............
    		 ? GO:0000244 ... Q6P2Q9 38778104
    151197 8r0b:B1
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000245 ... O75533 38778104
    151198 8r0b:B1
    (4.4)    		 BS02 >8r0b:Z (identical to 8qxd:Z, 8qzs:Z, 8r08:Z, 8r09:Z, 8r0a:Z, 8rm5:Z)
    gaugucauacuuauc
...............
    		 ? GO:0000245 ... O75533 38778104
    151199 8r0b:B2
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... Q13435 38778104
    151200 8r0b:B6
    (4.4)    		 BS01 >8r0b:2 (identical to 8r09:2, 8rm5:2)
    cgcuucucggccaaguguaguaucuguucuuaucaguuuaauaucugaug
gauuuuuggagcaucgaccugguauugcaguaccuccaggaacggugc
...............................<<<<<.<....>.>>>>>.
..........<<<<<<.<<<<<.............>>>>>..>>>>>>
    		 ? GO:0000398 ... Q9Y3B4 38778104
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218