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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    454001 8wmv:J (2.94) BS01 CLA ? GO:0009507 ... A6MVU6 38734819
    454002 8wmv:J (2.94) BS02 CLA ? GO:0009507 ... A6MVU6 38734819
    454003 8wmv:J (2.94) BS03 CLA ? GO:0009507 ... A6MVU6 38734819
    454004 8wmv:J (2.94) BS04 CLA ? GO:0009507 ... A6MVU6 38734819
    454005 8wmv:J (2.94) BS05 WVN ? GO:0009507 ... A6MVU6 38734819
    454006 8wmv:J (2.94) BS06 CLA ? GO:0009507 ... A6MVU6 38734819
    454007 8wmv:J (2.94) BS07 II0 ? GO:0009507 ... A6MVU6 38734819
    454008 8wmv:J (2.94) BS08 CLA ? GO:0009507 ... A6MVU6 38734819
    454009 8wmv:J (2.94) BS09 CLA ? GO:0009507 ... A6MVU6 38734819
    454010 8wmv:K (2.94) BS01 CLA ? GO:0009507 ... A6MVS9 38734819
    454011 8wmv:K (2.94) BS02 WVN ? GO:0009507 ... A6MVS9 38734819
    454012 8wmv:K (2.94) BS03 CLA ? GO:0009507 ... A6MVS9 38734819
    454013 8wmv:K (2.94) BS04 CLA ? GO:0009507 ... A6MVS9 38734819
    454014 8wmv:K (2.94) BS05 WVN ? GO:0009507 ... A6MVS9 38734819
    454015 8wmv:K (2.94) BS06 CLA ? GO:0009507 ... A6MVS9 38734819
    454016 8wmv:K (2.94) BS07 CLA ? GO:0009507 ... A6MVS9 38734819
    454017 8wmv:L (2.94) BS01 CLA ? GO:0009507 ... A6MVV8 38734819
    454018 8wmv:L (2.94) BS02 CLA ? GO:0009507 ... A6MVV8 38734819
    454019 8wmv:L (2.94) BS03 CLA ? GO:0009507 ... A6MVV8 38734819
    454020 8wmv:L (2.94) BS04 CLA ? GO:0009507 ... A6MVV8 38734819
    454021 8wmv:L (2.94) BS05 CLA ? GO:0009507 ... A6MVV8 38734819
    454022 8wmv:L (2.94) BS06 WVN ? GO:0009507 ... A6MVV8 38734819
    454023 8wmv:L (2.94) BS07 CLA ? GO:0009507 ... A6MVV8 38734819
    454024 8wmv:L (2.94) BS08 CLA ? GO:0009507 ... A6MVV8 38734819
    454025 8wmv:L (2.94) BS09 CLA ? GO:0009507 ... A6MVV8 38734819
    454026 8wmv:L (2.94) BS10 WVN ? GO:0009507 ... A6MVV8 38734819
    454027 8wmv:L (2.94) BS11 CLA ? GO:0009507 ... A6MVV8 38734819
    454028 8wmv:L (2.94) BS12 CLA ? GO:0009507 ... A6MVV8 38734819
    454029 8wmv:L (2.94) BS13 CLA ? GO:0009507 ... A6MVV8 38734819
    454030 8wmv:M (2.94) BS01 WVN ? GO:0009507 ... A6MVT4 38734819
    454031 8wmv:O (2.94) BS01 CLA N/A N/A N/A 38734819
    454032 8wmv:O (2.94) BS02 CLA N/A N/A N/A 38734819
    454033 8wmv:O (2.94) BS03 CLA N/A N/A N/A 38734819
    454034 8wmv:O (2.94) BS04 CLA N/A N/A N/A 38734819
    454035 8wmv:O (2.94) BS05 II0 N/A N/A N/A 38734819
    454036 8wmv:O (2.94) BS06 IHT N/A N/A N/A 38734819
    454037 8wmv:O (2.94) BS07 CLA N/A N/A N/A 38734819
    454038 8wmv:O (2.94) BS08 CLA N/A N/A N/A 38734819
    454039 8wmv:R (2.94) BS01 CLA N/A N/A N/A 38734819
    454040 8wmv:R (2.94) BS02 CLA N/A N/A N/A 38734819
    454041 8wmv:R (2.94) BS03 CLA N/A N/A N/A 38734819
    454042 8wmv:R (2.94) BS04 IHT N/A N/A N/A 38734819
    454043 8wmv:a (2.94) BS01 CLA N/A N/A N/A 38734819
    454044 8wmv:a (2.94) BS02 CLA N/A N/A N/A 38734819
    454045 8wmv:a (2.94) BS03 CLA N/A N/A N/A 38734819
    454046 8wmv:a (2.94) BS04 CLA N/A N/A N/A 38734819
    454047 8wmv:a (2.94) BS05 CLA N/A N/A N/A 38734819
    454048 8wmv:a (2.94) BS06 CLA N/A N/A N/A 38734819
    454049 8wmv:a (2.94) BS07 CLA N/A N/A N/A 38734819
    454050 8wmv:a (2.94) BS08 CLA N/A N/A N/A 38734819
    454051 8wmv:a (2.94) BS09 CLA N/A N/A N/A 38734819
    454052 8wmv:a (2.94) BS10 CLA N/A N/A N/A 38734819
    454053 8wmv:a (2.94) BS11 CLA N/A N/A N/A 38734819
    454054 8wmv:a (2.94) BS12 CLA N/A N/A N/A 38734819
    454055 8wmv:a (2.94) BS13 II0 N/A N/A N/A 38734819
    454056 8wmv:a (2.94) BS14 II0 N/A N/A N/A 38734819
    454057 8wmv:a (2.94) BS15 II0 N/A N/A N/A 38734819
    454058 8wmv:a (2.94) BS16 IHT N/A N/A N/A 38734819
    454059 8wmv:a (2.94) BS17 II0 N/A N/A N/A 38734819
    454060 8wmv:a (2.94) BS18 CLA N/A N/A N/A 38734819
    454061 8wmv:b (2.94) BS01 CLA N/A N/A N/A 38734819
    454062 8wmv:b (2.94) BS02 CLA N/A N/A N/A 38734819
    454063 8wmv:b (2.94) BS03 IHT N/A N/A N/A 38734819
    454064 8wmv:b (2.94) BS04 CLA N/A N/A N/A 38734819
    454065 8wmv:b (2.94) BS05 CLA N/A N/A N/A 38734819
    454066 8wmv:b (2.94) BS06 CLA N/A N/A N/A 38734819
    454067 8wmv:b (2.94) BS07 CLA N/A N/A N/A 38734819
    454068 8wmv:b (2.94) BS08 CLA N/A N/A N/A 38734819
    454069 8wmv:b (2.94) BS09 CLA N/A N/A N/A 38734819
    454070 8wmv:b (2.94) BS10 CLA N/A N/A N/A 38734819
    454071 8wmv:b (2.94) BS11 CLA N/A N/A N/A 38734819
    454072 8wmv:b (2.94) BS12 CLA N/A N/A N/A 38734819
    454073 8wmv:b (2.94) BS13 CLA N/A N/A N/A 38734819
    454074 8wmv:b (2.94) BS14 CLA N/A N/A N/A 38734819
    454075 8wmv:b (2.94) BS15 II0 N/A N/A N/A 38734819
    454076 8wmv:b (2.94) BS16 II0 N/A N/A N/A 38734819
    454077 8wmv:b (2.94) BS17 IHT N/A N/A N/A 38734819
    454078 8wmv:b (2.94) BS18 II0 N/A N/A N/A 38734819
    454079 8wmv:c (2.94) BS01 CLA N/A N/A N/A 38734819
    454080 8wmv:c (2.94) BS02 CLA N/A N/A N/A 38734819
    454081 8wmv:c (2.94) BS03 CLA N/A N/A N/A 38734819
    454082 8wmv:c (2.94) BS04 CLA N/A N/A N/A 38734819
    454083 8wmv:c (2.94) BS05 CLA N/A N/A N/A 38734819
    454084 8wmv:c (2.94) BS06 CLA N/A N/A N/A 38734819
    454085 8wmv:c (2.94) BS07 CLA N/A N/A N/A 38734819
    454086 8wmv:c (2.94) BS08 CLA N/A N/A N/A 38734819
    454087 8wmv:c (2.94) BS09 CLA N/A N/A N/A 38734819
    454088 8wmv:c (2.94) BS10 KC2 N/A N/A N/A 38734819
    454089 8wmv:c (2.94) BS11 CLA N/A N/A N/A 38734819
    454090 8wmv:c (2.94) BS12 CLA N/A N/A N/A 38734819
    454091 8wmv:c (2.94) BS13 II0 N/A N/A N/A 38734819
    454092 8wmv:c (2.94) BS14 II0 N/A N/A N/A 38734819
    454093 8wmv:c (2.94) BS15 II0 N/A N/A N/A 38734819
    454094 8wmv:c (2.94) BS16 IHT N/A N/A N/A 38734819
    454095 8wmv:c (2.94) BS17 II0 N/A N/A N/A 38734819
    454096 8wmv:c (2.94) BS18 IHT N/A N/A N/A 38734819
    454097 8wmv:d (2.94) BS01 CLA N/A N/A N/A 38734819
    454098 8wmv:d (2.94) BS02 CLA N/A N/A N/A 38734819
    454099 8wmv:d (2.94) BS03 CLA N/A N/A N/A 38734819
    454100 8wmv:d (2.94) BS04 CLA N/A N/A N/A 38734819
    454101 8wmv:d (2.94) BS05 CLA N/A N/A N/A 38734819
    454102 8wmv:d (2.94) BS06 CLA N/A N/A N/A 38734819
    454103 8wmv:d (2.94) BS07 CLA N/A N/A N/A 38734819
    454104 8wmv:d (2.94) BS08 CLA N/A N/A N/A 38734819
    454105 8wmv:d (2.94) BS09 KC2 N/A N/A N/A 38734819
    454106 8wmv:d (2.94) BS10 KC2 N/A N/A N/A 38734819
    454107 8wmv:d (2.94) BS11 CLA N/A N/A N/A 38734819
    454108 8wmv:d (2.94) BS12 II0 N/A N/A N/A 38734819
    454109 8wmv:d (2.94) BS13 II0 N/A N/A N/A 38734819
    454110 8wmv:d (2.94) BS14 II0 N/A N/A N/A 38734819
    454111 8wmv:e (2.94) BS01 CLA N/A N/A N/A 38734819
    454112 8wmv:e (2.94) BS02 CLA N/A N/A N/A 38734819
    454113 8wmv:e (2.94) BS03 CLA N/A N/A N/A 38734819
    454114 8wmv:e (2.94) BS04 CLA N/A N/A N/A 38734819
    454115 8wmv:e (2.94) BS05 CLA N/A N/A N/A 38734819
    454116 8wmv:e (2.94) BS06 CLA N/A N/A N/A 38734819
    454117 8wmv:e (2.94) BS07 CLA N/A N/A N/A 38734819
    454118 8wmv:e (2.94) BS08 KC2 N/A N/A N/A 38734819
    454119 8wmv:e (2.94) BS09 CLA N/A N/A N/A 38734819
    454120 8wmv:e (2.94) BS10 CLA N/A N/A N/A 38734819
    454121 8wmv:e (2.94) BS11 II0 N/A N/A N/A 38734819
    454122 8wmv:e (2.94) BS12 II0 N/A N/A N/A 38734819
    454123 8wmv:e (2.94) BS13 II0 N/A N/A N/A 38734819
    454124 8wmv:e (2.94) BS14 WVN N/A N/A N/A 38734819
    454125 8wmv:e (2.94) BS15 II0 N/A N/A N/A 38734819
    454126 8wmv:f (2.94) BS01 CLA N/A N/A N/A 38734819
    454127 8wmv:f (2.94) BS02 CLA N/A N/A N/A 38734819
    454128 8wmv:f (2.94) BS03 CLA N/A N/A N/A 38734819
    454129 8wmv:f (2.94) BS04 CLA N/A N/A N/A 38734819
    454130 8wmv:f (2.94) BS05 CLA N/A N/A N/A 38734819
    454131 8wmv:f (2.94) BS06 CLA N/A N/A N/A 38734819
    454132 8wmv:f (2.94) BS07 CLA N/A N/A N/A 38734819
    454133 8wmv:f (2.94) BS08 CLA N/A N/A N/A 38734819
    454134 8wmv:f (2.94) BS09 CLA N/A N/A N/A 38734819
    454135 8wmv:f (2.94) BS10 CLA N/A N/A N/A 38734819
    454136 8wmv:f (2.94) BS11 KC2 N/A N/A N/A 38734819
    454137 8wmv:f (2.94) BS12 CLA N/A N/A N/A 38734819
    454138 8wmv:f (2.94) BS13 CLA N/A N/A N/A 38734819
    454139 8wmv:f (2.94) BS14 II0 N/A N/A N/A 38734819
    454140 8wmv:f (2.94) BS15 II0 N/A N/A N/A 38734819
    454141 8wmv:f (2.94) BS16 II0 N/A N/A N/A 38734819
    454142 8wmv:f (2.94) BS17 IHT N/A N/A N/A 38734819
    454143 8wmv:f (2.94) BS18 II0 N/A N/A N/A 38734819
    454144 8wmv:g (2.94) BS01 CLA N/A N/A N/A 38734819
    454145 8wmv:g (2.94) BS02 CLA N/A N/A N/A 38734819
    454146 8wmv:g (2.94) BS03 CLA N/A N/A N/A 38734819
    454147 8wmv:g (2.94) BS04 CLA N/A N/A N/A 38734819
    454148 8wmv:g (2.94) BS05 CLA N/A N/A N/A 38734819
    454149 8wmv:g (2.94) BS06 CLA N/A N/A N/A 38734819
    454150 8wmv:g (2.94) BS07 CLA N/A N/A N/A 38734819
    454151 8wmv:g (2.94) BS08 CLA N/A N/A N/A 38734819
    454152 8wmv:g (2.94) BS09 CLA N/A N/A N/A 38734819
    454153 8wmv:g (2.94) BS10 CLA N/A N/A N/A 38734819
    454154 8wmv:g (2.94) BS11 CLA N/A N/A N/A 38734819
    454155 8wmv:g (2.94) BS12 KC2 N/A N/A N/A 38734819
    454156 8wmv:g (2.94) BS13 KC2 N/A N/A N/A 38734819
    454157 8wmv:g (2.94) BS14 KC2 N/A N/A N/A 38734819
    454158 8wmv:g (2.94) BS15 CLA N/A N/A N/A 38734819
    454159 8wmv:g (2.94) BS16 II0 N/A N/A N/A 38734819
    454160 8wmv:g (2.94) BS17 II0 N/A N/A N/A 38734819
    454161 8wmv:g (2.94) BS18 II0 N/A N/A N/A 38734819
    454162 8wmv:g (2.94) BS19 IHT N/A N/A N/A 38734819
    454163 8wmv:g (2.94) BS20 II0 N/A N/A N/A 38734819
    454164 8wmv:g (2.94) BS21 CLA N/A N/A N/A 38734819
    454165 8wmv:h (2.94) BS01 CLA N/A N/A N/A 38734819
    454166 8wmv:h (2.94) BS02 CLA N/A N/A N/A 38734819
    454167 8wmv:h (2.94) BS03 CLA N/A N/A N/A 38734819
    454168 8wmv:h (2.94) BS04 CLA N/A N/A N/A 38734819
    454169 8wmv:h (2.94) BS05 CLA N/A N/A N/A 38734819
    454170 8wmv:h (2.94) BS06 CLA N/A N/A N/A 38734819
    454171 8wmv:h (2.94) BS07 CLA N/A N/A N/A 38734819
    454172 8wmv:h (2.94) BS08 WVN N/A N/A N/A 38734819
    454173 8wmv:h (2.94) BS09 II0 N/A N/A N/A 38734819
    454174 8wmv:h (2.94) BS10 II0 N/A N/A N/A 38734819
    454175 8wmv:h (2.94) BS11 II0 N/A N/A N/A 38734819
    454176 8wmv:h (2.94) BS12 CLA N/A N/A N/A 38734819
    454177 8wmv:i (2.94) BS01 CLA N/A N/A N/A 38734819
    454178 8wmv:i (2.94) BS02 CLA N/A N/A N/A 38734819
    454179 8wmv:i (2.94) BS03 CLA N/A N/A N/A 38734819
    454180 8wmv:i (2.94) BS04 CLA N/A N/A N/A 38734819
    454181 8wmv:i (2.94) BS05 CLA N/A N/A N/A 38734819
    454182 8wmv:i (2.94) BS06 CLA N/A N/A N/A 38734819
    454183 8wmv:i (2.94) BS07 CLA N/A N/A N/A 38734819
    454184 8wmv:i (2.94) BS08 KC2 N/A N/A N/A 38734819
    454185 8wmv:i (2.94) BS09 CLA N/A N/A N/A 38734819
    454186 8wmv:i (2.94) BS10 CLA N/A N/A N/A 38734819
    454187 8wmv:i (2.94) BS11 II0 N/A N/A N/A 38734819
    454188 8wmv:i (2.94) BS12 II0 N/A N/A N/A 38734819
    454189 8wmv:i (2.94) BS13 WVN N/A N/A N/A 38734819
    454190 8wmv:i (2.94) BS14 KC2 N/A N/A N/A 38734819
    454191 8wmv:i (2.94) BS15 II0 N/A N/A N/A 38734819
    454192 8wmv:i (2.94) BS16 CLA N/A N/A N/A 38734819
    454193 8wmv:j (2.94) BS01 CLA N/A N/A N/A 38734819
    454194 8wmv:j (2.94) BS02 II0 N/A N/A N/A 38734819
    454195 8wmv:j (2.94) BS03 CLA N/A N/A N/A 38734819
    454196 8wmv:j (2.94) BS04 CLA N/A N/A N/A 38734819
    454197 8wmv:j (2.94) BS05 CLA N/A N/A N/A 38734819
    454198 8wmv:j (2.94) BS06 CLA N/A N/A N/A 38734819
    454199 8wmv:j (2.94) BS07 CLA N/A N/A N/A 38734819
    454200 8wmv:j (2.94) BS08 CLA N/A N/A N/A 38734819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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