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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    453201 8wm6:b (2.7) BS01 CLA N/A N/A N/A 38734819
    453202 8wm6:b (2.7) BS02 CLA N/A N/A N/A 38734819
    453203 8wm6:b (2.7) BS03 CLA N/A N/A N/A 38734819
    453204 8wm6:b (2.7) BS04 CLA N/A N/A N/A 38734819
    453205 8wm6:b (2.7) BS05 CLA N/A N/A N/A 38734819
    453206 8wm6:b (2.7) BS06 CLA N/A N/A N/A 38734819
    453207 8wm6:b (2.7) BS07 CLA N/A N/A N/A 38734819
    453208 8wm6:b (2.7) BS08 CLA N/A N/A N/A 38734819
    453209 8wm6:b (2.7) BS09 CLA N/A N/A N/A 38734819
    453210 8wm6:b (2.7) BS10 CLA N/A N/A N/A 38734819
    453211 8wm6:b (2.7) BS11 CLA N/A N/A N/A 38734819
    453212 8wm6:b (2.7) BS12 CLA N/A N/A N/A 38734819
    453213 8wm6:b (2.7) BS13 CLA N/A N/A N/A 38734819
    453214 8wm6:b (2.7) BS14 CLA N/A N/A N/A 38734819
    453215 8wm6:b (2.7) BS15 CLA N/A N/A N/A 38734819
    453216 8wm6:b (2.7) BS16 II0 N/A N/A N/A 38734819
    453217 8wm6:b (2.7) BS17 II0 N/A N/A N/A 38734819
    453218 8wm6:b (2.7) BS18 IHT N/A N/A N/A 38734819
    453219 8wm6:b (2.7) BS19 IHT N/A N/A N/A 38734819
    453220 8wm6:b (2.7) BS20 II0 N/A N/A N/A 38734819
    453221 8wm6:c (2.7) BS01 CLA N/A N/A N/A 38734819
    453222 8wm6:c (2.7) BS02 CLA N/A N/A N/A 38734819
    453223 8wm6:c (2.7) BS03 CLA N/A N/A N/A 38734819
    453224 8wm6:c (2.7) BS04 CLA N/A N/A N/A 38734819
    453225 8wm6:c (2.7) BS05 CLA N/A N/A N/A 38734819
    453226 8wm6:c (2.7) BS06 CLA N/A N/A N/A 38734819
    453227 8wm6:c (2.7) BS07 CLA N/A N/A N/A 38734819
    453228 8wm6:c (2.7) BS08 CLA N/A N/A N/A 38734819
    453229 8wm6:c (2.7) BS09 CLA N/A N/A N/A 38734819
    453230 8wm6:c (2.7) BS10 KC2 N/A N/A N/A 38734819
    453231 8wm6:c (2.7) BS11 CLA N/A N/A N/A 38734819
    453232 8wm6:c (2.7) BS12 CLA N/A N/A N/A 38734819
    453233 8wm6:c (2.7) BS13 II0 N/A N/A N/A 38734819
    453234 8wm6:c (2.7) BS14 II0 N/A N/A N/A 38734819
    453235 8wm6:c (2.7) BS15 II0 N/A N/A N/A 38734819
    453236 8wm6:c (2.7) BS16 IHT N/A N/A N/A 38734819
    453237 8wm6:c (2.7) BS17 II0 N/A N/A N/A 38734819
    453238 8wm6:d (2.7) BS01 CLA N/A N/A N/A 38734819
    453239 8wm6:d (2.7) BS02 IHT N/A N/A N/A 38734819
    453240 8wm6:d (2.7) BS03 CLA N/A N/A N/A 38734819
    453241 8wm6:d (2.7) BS04 CLA N/A N/A N/A 38734819
    453242 8wm6:d (2.7) BS05 CLA N/A N/A N/A 38734819
    453243 8wm6:d (2.7) BS06 CLA N/A N/A N/A 38734819
    453244 8wm6:d (2.7) BS07 CLA N/A N/A N/A 38734819
    453245 8wm6:d (2.7) BS08 CLA N/A N/A N/A 38734819
    453246 8wm6:d (2.7) BS09 CLA N/A N/A N/A 38734819
    453247 8wm6:d (2.7) BS10 CLA N/A N/A N/A 38734819
    453248 8wm6:d (2.7) BS11 CLA N/A N/A N/A 38734819
    453249 8wm6:d (2.7) BS12 KC2 N/A N/A N/A 38734819
    453250 8wm6:d (2.7) BS13 KC2 N/A N/A N/A 38734819
    453251 8wm6:d (2.7) BS14 CLA N/A N/A N/A 38734819
    453252 8wm6:d (2.7) BS15 II0 N/A N/A N/A 38734819
    453253 8wm6:d (2.7) BS16 II0 N/A N/A N/A 38734819
    453254 8wm6:d (2.7) BS17 II0 N/A N/A N/A 38734819
    453255 8wm6:d (2.7) BS18 II0 N/A N/A N/A 38734819
    453256 8wm6:e (2.7) BS01 CLA N/A N/A N/A 38734819
    453257 8wm6:e (2.7) BS02 CLA N/A N/A N/A 38734819
    453258 8wm6:e (2.7) BS03 CLA N/A N/A N/A 38734819
    453259 8wm6:e (2.7) BS04 CLA N/A N/A N/A 38734819
    453260 8wm6:e (2.7) BS05 CLA N/A N/A N/A 38734819
    453261 8wm6:e (2.7) BS06 CLA N/A N/A N/A 38734819
    453262 8wm6:e (2.7) BS07 CLA N/A N/A N/A 38734819
    453263 8wm6:e (2.7) BS08 CLA N/A N/A N/A 38734819
    453264 8wm6:e (2.7) BS09 KC2 N/A N/A N/A 38734819
    453265 8wm6:e (2.7) BS10 CLA N/A N/A N/A 38734819
    453266 8wm6:e (2.7) BS11 CLA N/A N/A N/A 38734819
    453267 8wm6:e (2.7) BS12 II0 N/A N/A N/A 38734819
    453268 8wm6:e (2.7) BS13 II0 N/A N/A N/A 38734819
    453269 8wm6:e (2.7) BS14 II0 N/A N/A N/A 38734819
    453270 8wm6:e (2.7) BS15 WVN N/A N/A N/A 38734819
    453271 8wm6:e (2.7) BS16 II0 N/A N/A N/A 38734819
    453272 8wm6:f (2.7) BS01 CLA N/A N/A N/A 38734819
    453273 8wm6:f (2.7) BS02 CLA N/A N/A N/A 38734819
    453274 8wm6:f (2.7) BS03 CLA N/A N/A N/A 38734819
    453275 8wm6:f (2.7) BS04 CLA N/A N/A N/A 38734819
    453276 8wm6:f (2.7) BS05 CLA N/A N/A N/A 38734819
    453277 8wm6:f (2.7) BS06 CLA N/A N/A N/A 38734819
    453278 8wm6:f (2.7) BS07 CLA N/A N/A N/A 38734819
    453279 8wm6:f (2.7) BS08 CLA N/A N/A N/A 38734819
    453280 8wm6:f (2.7) BS09 CLA N/A N/A N/A 38734819
    453281 8wm6:f (2.7) BS10 KC2 N/A N/A N/A 38734819
    453282 8wm6:f (2.7) BS11 CLA N/A N/A N/A 38734819
    453283 8wm6:f (2.7) BS12 CLA N/A N/A N/A 38734819
    453284 8wm6:f (2.7) BS13 II0 N/A N/A N/A 38734819
    453285 8wm6:f (2.7) BS14 II0 N/A N/A N/A 38734819
    453286 8wm6:f (2.7) BS15 II0 N/A N/A N/A 38734819
    453287 8wm6:f (2.7) BS16 IHT N/A N/A N/A 38734819
    453288 8wm6:f (2.7) BS17 II0 N/A N/A N/A 38734819
    453289 8wm6:g (2.7) BS01 CLA N/A N/A N/A 38734819
    453290 8wm6:g (2.7) BS02 CLA N/A N/A N/A 38734819
    453291 8wm6:g (2.7) BS03 CLA N/A N/A N/A 38734819
    453292 8wm6:g (2.7) BS04 II0 N/A N/A N/A 38734819
    453293 8wm6:g (2.7) BS05 CLA N/A N/A N/A 38734819
    453294 8wm6:g (2.7) BS06 CLA N/A N/A N/A 38734819
    453295 8wm6:g (2.7) BS07 CLA N/A N/A N/A 38734819
    453296 8wm6:g (2.7) BS08 CLA N/A N/A N/A 38734819
    453297 8wm6:g (2.7) BS09 CLA N/A N/A N/A 38734819
    453298 8wm6:g (2.7) BS10 CLA N/A N/A N/A 38734819
    453299 8wm6:g (2.7) BS11 CLA N/A N/A N/A 38734819
    453300 8wm6:g (2.7) BS12 CLA N/A N/A N/A 38734819
    453301 8wm6:g (2.7) BS13 CLA N/A N/A N/A 38734819
    453302 8wm6:g (2.7) BS14 CLA N/A N/A N/A 38734819
    453303 8wm6:g (2.7) BS15 KC2 N/A N/A N/A 38734819
    453304 8wm6:g (2.7) BS16 KC2 N/A N/A N/A 38734819
    453305 8wm6:g (2.7) BS17 KC2 N/A N/A N/A 38734819
    453306 8wm6:g (2.7) BS18 CLA N/A N/A N/A 38734819
    453307 8wm6:g (2.7) BS19 II0 N/A N/A N/A 38734819
    453308 8wm6:g (2.7) BS20 II0 N/A N/A N/A 38734819
    453309 8wm6:g (2.7) BS21 II0 N/A N/A N/A 38734819
    453310 8wm6:g (2.7) BS22 IHT N/A N/A N/A 38734819
    453311 8wm6:g (2.7) BS23 II0 N/A N/A N/A 38734819
    453312 8wm6:g (2.7) BS24 CLA N/A N/A N/A 38734819
    453313 8wm6:h (2.7) BS01 CLA N/A N/A N/A 38734819
    453314 8wm6:h (2.7) BS02 CLA N/A N/A N/A 38734819
    453315 8wm6:h (2.7) BS03 CLA N/A N/A N/A 38734819
    453316 8wm6:h (2.7) BS04 CLA N/A N/A N/A 38734819
    453317 8wm6:h (2.7) BS05 CLA N/A N/A N/A 38734819
    453318 8wm6:h (2.7) BS06 CLA N/A N/A N/A 38734819
    453319 8wm6:h (2.7) BS07 CLA N/A N/A N/A 38734819
    453320 8wm6:h (2.7) BS08 WVN N/A N/A N/A 38734819
    453321 8wm6:h (2.7) BS09 II0 N/A N/A N/A 38734819
    453322 8wm6:h (2.7) BS10 II0 N/A N/A N/A 38734819
    453323 8wm6:h (2.7) BS11 II0 N/A N/A N/A 38734819
    453324 8wm6:h (2.7) BS12 CLA N/A N/A N/A 38734819
    453325 8wm6:i (2.7) BS01 CLA N/A N/A N/A 38734819
    453326 8wm6:i (2.7) BS02 CLA N/A N/A N/A 38734819
    453327 8wm6:i (2.7) BS03 CLA N/A N/A N/A 38734819
    453328 8wm6:i (2.7) BS04 CLA N/A N/A N/A 38734819
    453329 8wm6:i (2.7) BS05 CLA N/A N/A N/A 38734819
    453330 8wm6:i (2.7) BS06 CLA N/A N/A N/A 38734819
    453331 8wm6:i (2.7) BS07 CLA N/A N/A N/A 38734819
    453332 8wm6:i (2.7) BS08 CLA N/A N/A N/A 38734819
    453333 8wm6:i (2.7) BS09 KC2 N/A N/A N/A 38734819
    453334 8wm6:i (2.7) BS10 CLA N/A N/A N/A 38734819
    453335 8wm6:i (2.7) BS11 CLA N/A N/A N/A 38734819
    453336 8wm6:i (2.7) BS12 II0 N/A N/A N/A 38734819
    453337 8wm6:i (2.7) BS13 II0 N/A N/A N/A 38734819
    453338 8wm6:i (2.7) BS14 II0 N/A N/A N/A 38734819
    453339 8wm6:i (2.7) BS15 WVN N/A N/A N/A 38734819
    453340 8wm6:i (2.7) BS16 II0 N/A N/A N/A 38734819
    453341 8wm6:i (2.7) BS17 KC2 N/A N/A N/A 38734819
    453342 8wm6:i (2.7) BS18 II0 N/A N/A N/A 38734819
    453343 8wm6:i (2.7) BS19 CLA N/A N/A N/A 38734819
    453344 8wm6:i (2.7) BS20 CLA N/A N/A N/A 38734819
    453345 8wm6:j (2.7) BS01 II0 N/A N/A N/A 38734819
    453346 8wm6:j (2.7) BS02 CLA N/A N/A N/A 38734819
    453347 8wm6:j (2.7) BS03 WVN N/A N/A N/A 38734819
    453348 8wm6:j (2.7) BS04 II0 N/A N/A N/A 38734819
    453349 8wm6:j (2.7) BS05 CLA N/A N/A N/A 38734819
    453350 8wm6:j (2.7) BS06 CLA N/A N/A N/A 38734819
    453351 8wm6:j (2.7) BS07 CLA N/A N/A N/A 38734819
    453352 8wm6:j (2.7) BS08 CLA N/A N/A N/A 38734819
    453353 8wm6:j (2.7) BS09 CLA N/A N/A N/A 38734819
    453354 8wm6:j (2.7) BS10 CLA N/A N/A N/A 38734819
    453355 8wm6:j (2.7) BS11 CLA N/A N/A N/A 38734819
    453356 8wm6:j (2.7) BS12 CLA N/A N/A N/A 38734819
    453357 8wm6:j (2.7) BS13 CLA N/A N/A N/A 38734819
    453358 8wm6:j (2.7) BS14 CLA N/A N/A N/A 38734819
    453359 8wm6:j (2.7) BS15 KC2 N/A N/A N/A 38734819
    453360 8wm6:j (2.7) BS16 CLA N/A N/A N/A 38734819
    453361 8wm6:j (2.7) BS17 CLA N/A N/A N/A 38734819
    453362 8wm6:j (2.7) BS18 II0 N/A N/A N/A 38734819
    453363 8wm6:j (2.7) BS19 II0 N/A N/A N/A 38734819
    453364 8wm6:j (2.7) BS20 IHT N/A N/A N/A 38734819
    453365 8wm6:k (2.7) BS01 CLA N/A N/A N/A 38734819
    453366 8wm6:k (2.7) BS02 CLA N/A N/A N/A 38734819
    453367 8wm6:k (2.7) BS03 CLA N/A N/A N/A 38734819
    453368 8wm6:k (2.7) BS04 CLA N/A N/A N/A 38734819
    453369 8wm6:k (2.7) BS05 CLA N/A N/A N/A 38734819
    453370 8wm6:k (2.7) BS06 CLA N/A N/A N/A 38734819
    453371 8wm6:k (2.7) BS07 CLA N/A N/A N/A 38734819
    453372 8wm6:k (2.7) BS08 CLA N/A N/A N/A 38734819
    453373 8wm6:k (2.7) BS09 CLA N/A N/A N/A 38734819
    453374 8wm6:k (2.7) BS10 CLA N/A N/A N/A 38734819
    453375 8wm6:k (2.7) BS11 KC2 N/A N/A N/A 38734819
    453376 8wm6:k (2.7) BS12 KC2 N/A N/A N/A 38734819
    453377 8wm6:k (2.7) BS13 KC2 N/A N/A N/A 38734819
    453378 8wm6:k (2.7) BS14 CLA N/A N/A N/A 38734819
    453379 8wm6:k (2.7) BS15 II0 N/A N/A N/A 38734819
    453380 8wm6:k (2.7) BS16 II0 N/A N/A N/A 38734819
    453381 8wm6:k (2.7) BS17 II0 N/A N/A N/A 38734819
    453382 8wm6:k (2.7) BS18 IHT N/A N/A N/A 38734819
    453383 8wm6:k (2.7) BS19 II0 N/A N/A N/A 38734819
    453384 8wm6:k (2.7) BS20 II0 N/A N/A N/A 38734819
    453385 8wm6:k (2.7) BS21 CLA N/A N/A N/A 38734819
    453386 8wm6:l (2.7) BS01 CLA N/A N/A N/A 38734819
    453387 8wm6:l (2.7) BS02 CLA N/A N/A N/A 38734819
    453388 8wm6:l (2.7) BS03 CLA N/A N/A N/A 38734819
    453389 8wm6:l (2.7) BS04 WVN N/A N/A N/A 38734819
    453390 8wm6:l (2.7) BS05 CLA N/A N/A N/A 38734819
    453391 8wm6:l (2.7) BS06 CLA N/A N/A N/A 38734819
    453392 8wm6:l (2.7) BS07 CLA N/A N/A N/A 38734819
    453393 8wm6:l (2.7) BS08 CLA N/A N/A N/A 38734819
    453394 8wm6:l (2.7) BS09 CLA N/A N/A N/A 38734819
    453395 8wm6:l (2.7) BS10 CLA N/A N/A N/A 38734819
    453396 8wm6:l (2.7) BS11 CLA N/A N/A N/A 38734819
    453397 8wm6:l (2.7) BS12 CLA N/A N/A N/A 38734819
    453398 8wm6:l (2.7) BS13 KC2 N/A N/A N/A 38734819
    453399 8wm6:l (2.7) BS14 CLA N/A N/A N/A 38734819
    453400 8wm6:l (2.7) BS15 II0 N/A N/A N/A 38734819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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