Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 2252 2253 2254 2255 2256 2257 2258 2259 2260 2261 2262 2263 2264 2265 2266 2267 2268 2269 2270 2271 2272 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    452201 8wdu:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452202 8wdu:X (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452203 8wdu:Y (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452204 8wdu:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452205 8wdu:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452206 8wdu:Y (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452207 8wdu:Y (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    452208 8wdu:Y (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    452209 8wdu:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452210 8wdu:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452211 8wdu:Z (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452212 8wdv:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452213 8wdv:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452214 8wdv:0 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452215 8wdv:1 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452216 8wdv:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452217 8wdv:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452218 8wdv:1 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452219 8wdv:1 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452220 8wdv:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452221 8wdv:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452222 8wdv:2 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452223 8wdv:3 (2.24) BS01 CRT ? GO:0005886 ... D3RP67 38347078
    452224 8wdv:3 (2.24) BS02 BCL ? GO:0005886 ... D3RP67 38347078
    452225 8wdv:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    452226 8wdv:3 (2.24) BS04 CRT ? GO:0005886 ... D3RP67 38347078
    452227 8wdv:3 (2.24) BS05 BCL ? GO:0005886 ... D3RP67 38347078
    452228 8wdv:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452229 8wdv:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452230 8wdv:4 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452231 8wdv:5 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452232 8wdv:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452233 8wdv:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452234 8wdv:5 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452235 8wdv:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452236 8wdv:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452237 8wdv:6 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452238 8wdv:7 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    452239 8wdv:7 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    452240 8wdv:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452241 8wdv:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    452242 8wdv:7 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452243 8wdv:7 (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    452244 8wdv:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452245 8wdv:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452246 8wdv:8 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452247 8wdv:9 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452248 8wdv:9 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    452249 8wdv:9 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452250 8wdv:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    452251 8wdv:9 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452252 8wdv:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    452253 8wdv:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452254 8wdv:A (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    452255 8wdv:A (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452256 8wdv:A (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452257 8wdv:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452258 8wdv:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452259 8wdv:B (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452260 8wdv:C (2.24) BS01 HEM ? GO:0005506 ... O82947 38347078
    452261 8wdv:C (2.24) BS02 HEM ? GO:0005506 ... O82947 38347078
    452262 8wdv:C (2.24) BS03 HEM ? GO:0005506 ... O82947 38347078
    452263 8wdv:C (2.24) BS04 HEM ? GO:0005506 ... O82947 38347078
    452264 8wdv:C (2.24) BS06 Z41 ? GO:0005506 ... O82947 38347078
    452265 8wdv:D (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452266 8wdv:D (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452267 8wdv:D (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452268 8wdv:D (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452269 8wdv:D (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452270 8wdv:E (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452271 8wdv:E (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452272 8wdv:E (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452273 8wdv:F (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452274 8wdv:F (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452275 8wdv:F (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452276 8wdv:F (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452277 8wdv:F (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    452278 8wdv:F (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    452279 8wdv:G (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452280 8wdv:G (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452281 8wdv:G (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452282 8wdv:I (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452283 8wdv:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452284 8wdv:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452285 8wdv:I (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452286 8wdv:I (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    452287 8wdv:I (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    452288 8wdv:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452289 8wdv:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452290 8wdv:J (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452291 8wdv:K (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452292 8wdv:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452293 8wdv:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452294 8wdv:K (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452295 8wdv:K (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    452296 8wdv:K (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    452297 8wdv:L (2.24) BS01 Z41 ? GO:0009772 ... P51762 38347078
    452298 8wdv:L (2.24) BS02 BCL ? GO:0009772 ... P51762 38347078
    452299 8wdv:L (2.24) BS03 BPH ? GO:0009772 ... P51762 38347078
    452300 8wdv:L (2.24) BS04 UQ8 ? GO:0009772 ... P51762 38347078
    452301 8wdv:L (2.24) BS05 UQ8 ? GO:0009772 ... P51762 38347078
    452302 8wdv:L (2.24) BS06 BCL ? GO:0009772 ... P51762 38347078
    452303 8wdv:L (2.24) BS07 UQ8 ? GO:0009772 ... P51762 38347078
    452304 8wdv:L (2.24) BS09 BCL ? GO:0009772 ... P51762 38347078
    452305 8wdv:L (2.24) BS10 BPH ? GO:0009772 ... P51762 38347078
    452306 8wdv:L (2.24) BS11 MQ8 ? GO:0009772 ... P51762 38347078
    452307 8wdv:M (2.24) BS01 BPH ? GO:0009772 ... P51763 38347078
    452308 8wdv:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    452309 8wdv:M (2.24) BS03 UQ8 ? GO:0009772 ... P51763 38347078
    452310 8wdv:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    452311 8wdv:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    452312 8wdv:M (2.24) BS07 BPH ? GO:0009772 ... P51763 38347078
    452313 8wdv:M (2.24) BS08 MQ8 ? GO:0009772 ... P51763 38347078
    452314 8wdv:M (2.24) BS09 CRT ? GO:0009772 ... P51763 38347078
    452315 8wdv:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452316 8wdv:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452317 8wdv:N (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452318 8wdv:O (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452319 8wdv:O (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    452320 8wdv:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452321 8wdv:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    452322 8wdv:O (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452323 8wdv:O (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    452324 8wdv:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452325 8wdv:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452326 8wdv:P (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452327 8wdv:Q (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452328 8wdv:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452329 8wdv:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452330 8wdv:Q (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452331 8wdv:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    452332 8wdv:Q (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    452333 8wdv:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452334 8wdv:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452335 8wdv:R (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452336 8wdv:S (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452337 8wdv:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452338 8wdv:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452339 8wdv:S (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452340 8wdv:S (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452341 8wdv:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452342 8wdv:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452343 8wdv:T (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452344 8wdv:U (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452345 8wdv:U (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452346 8wdv:U (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452347 8wdv:U (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452348 8wdv:U (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452349 8wdv:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452350 8wdv:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452351 8wdv:V (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452352 8wdv:W (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    452353 8wdv:W (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    452354 8wdv:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    452355 8wdv:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    452356 8wdv:W (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452357 8wdv:W (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    452358 8wdv:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452359 8wdv:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452360 8wdv:X (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452361 8wdv:Y (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452362 8wdv:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452363 8wdv:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452364 8wdv:Y (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452365 8wdv:Y (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452366 8wdv:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452367 8wdv:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452368 8wdv:Z (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452369 8wdv:Z (2.24) BS04 BCL ? GO:0005886 ... D3RP68 38347078
    452370 8wdx:A (1.65) BS01 W6K ? GO:0005324 ... P15090 38043490
    452371 8we3:A (1.82) BS01 W6B ? GO:0005324 ... P15090 38043490
    452372 8we6:A (2.9) BS02 CLR ? GO:0002520 ... Q13936 37972591
    452373 8we6:A (2.9) BS03 CLR ? GO:0002520 ... Q13936 37972591
    452374 8we6:A (2.9) BS04 CLR ? GO:0002520 ... Q13936 37972591
    452375 8we6:A (2.9) BS05 CLR ? GO:0002520 ... Q13936 37972591
    452376 8we6:A (2.9) BS06 PT5 ? GO:0002520 ... Q13936 37972591
    452377 8we7:A (3.2) BS02 CLR ? GO:0002520 ... Q13936 37972591
    452378 8we7:A (3.2) BS03 CLR ? GO:0002520 ... Q13936 37972591
    452379 8we8:A (2.9) BS02 CLR ? GO:0002520 ... Q13936 37972591
    452380 8we8:A (2.9) BS03 CLR ? GO:0002520 ... Q13936 37972591
    452381 8we8:A (2.9) BS04 CLR ? GO:0002520 ... Q13936 37972591
    452382 8we8:A (2.9) BS05 CLR ? GO:0002520 ... Q13936 37972591
    452383 8we8:A (2.9) BS06 PT5 ? GO:0002520 ... Q13936 37972591
    452384 8we8:A (2.9) BS07 6UB ? GO:0002520 ... Q13936 37972591
    452385 8we8:A (2.9) BS08 CLR ? GO:0002520 ... Q13936 37972591
    452386 8we8:B (2.9) BS01 CLR ? GO:0005246 ... P22947 37972591
    452387 8we9:A (3.0) BS02 CLR ? GO:0002520 ... Q13936 37972591
    452388 8we9:A (3.0) BS03 CLR ? GO:0002520 ... Q13936 37972591
    452389 8we9:A (3.0) BS04 CLR ? GO:0002520 ... Q13936 37972591
    452390 8we9:A (3.0) BS05 PT5 ? GO:0002520 ... Q13936 37972591
    452391 8wea:A (3.2) BS01 9Z9 ? GO:0002520 ... Q13936 37972591
    452392 8wea:A (3.2) BS02 WB9 ? GO:0002520 ... Q13936 37972591
    452393 8wej:B (2.79) BS01 HEM 1.-.-.- GO:0005515 ... P04839 38355798
    452394 8wej:B (2.79) BS02 HEM 1.-.-.- GO:0005515 ... P04839 38355798
    452395 8wej:B (2.79) BS03 NDP 1.-.-.- GO:0005515 ... P04839 38355798
    452396 8wej:B (2.79) BS04 FDA 1.-.-.- GO:0005515 ... P04839 38355798
    452397 8wej:E (2.79) BS02 GTP 3.6.5.2 GO:0001764 ... P63000 38355798
    452398 8weq:A (3.29) BS01 FAD N/A N/A A0A4P7SP66 N/A
    452399 8weq:B (3.29) BS01 FAD N/A N/A A0A4P7SP66 N/A
    452400 8weq:C (3.29) BS01 FAD N/A N/A A0A4P7SP66 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218