Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 2251 2252 2253 2254 2255 2256 2257 2258 2259 2260 2261 2262 2263 2264 2265 2266 2267 2268 2269 2270 2271 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    452001 8wcl:8 (2.65) BS17 CLA N/A N/A N/A 39030906
    452002 8wcl:8 (2.65) BS18 A86 N/A N/A N/A 39030906
    452003 8wcl:9 (2.65) BS01 A86 N/A N/A N/A 39030906
    452004 8wcl:9 (2.65) BS02 A86 N/A N/A N/A 39030906
    452005 8wcl:9 (2.65) BS03 A86 N/A N/A N/A 39030906
    452006 8wcl:9 (2.65) BS04 A86 N/A N/A N/A 39030906
    452007 8wcl:9 (2.65) BS05 A86 N/A N/A N/A 39030906
    452008 8wcl:9 (2.65) BS06 A86 N/A N/A N/A 39030906
    452009 8wcl:9 (2.65) BS07 CLA N/A N/A N/A 39030906
    452010 8wcl:9 (2.65) BS08 CLA N/A N/A N/A 39030906
    452011 8wcl:9 (2.65) BS09 KC2 N/A N/A N/A 39030906
    452012 8wcl:9 (2.65) BS10 CLA N/A N/A N/A 39030906
    452013 8wcl:9 (2.65) BS11 CLA N/A N/A N/A 39030906
    452014 8wcl:9 (2.65) BS12 CLA N/A N/A N/A 39030906
    452015 8wcl:9 (2.65) BS13 CLA N/A N/A N/A 39030906
    452016 8wcl:9 (2.65) BS14 KC1 N/A N/A N/A 39030906
    452017 8wcl:9 (2.65) BS15 CLA N/A N/A N/A 39030906
    452018 8wcl:9 (2.65) BS16 CLA N/A N/A N/A 39030906
    452019 8wcn:A (3.2) BS01 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452020 8wcn:A (3.2) BS02 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452021 8wcn:A (3.2) BS03 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452022 8wcn:B (3.2) BS01 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452023 8wcn:B (3.2) BS02 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452024 8wcn:B (3.2) BS03 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452025 8wcn:B (3.2) BS04 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    452026 8wco:A (2.6) BS01 ACO ? GO:0000287 ... Q9I562 38677288
    452027 8wco:A (2.6) BS02 ACO ? GO:0000287 ... Q9I562 38677288
    452028 8wco:B (2.6) BS01 ACO ? GO:0000287 ... Q9I562 38677288
    452029 8wco:B (2.6) BS02 ACO ? GO:0000287 ... Q9I562 38677288
    452030 8wco:C (2.6) BS01 ACO ? GO:0000287 ... Q9I562 38677288
    452031 8wco:C (2.6) BS02 ACO ? GO:0000287 ... Q9I562 38677288
    452032 8wd0:A (2.6) BS01 GTP N/A GO:0000226 ... P81947 38905886
    452033 8wd0:B (2.6) BS01 W4F N/A GO:0005525 ... A0A287AGU7 38905886
    452034 8wd0:B (2.6) BS02 GDP N/A GO:0005525 ... A0A287AGU7 38905886
    452035 8wd0:C (2.6) BS01 GTP N/A GO:0000226 ... P81947 38905886
    452036 8wd0:D (2.6) BS01 GTP N/A GO:0005525 ... A0A287AGU7 38905886
    452037 8wd0:D (2.6) BS02 W4F N/A GO:0005525 ... A0A287AGU7 38905886
    452038 8wd0:F (2.6) BS01 ACP N/A GO:0046872 ... A0A8V0Z8P0 38905886
    452039 8wd4:A (2.55) BS01 W7W 2.7.10.1 GO:0004672 ... P00533 38065292
    452040 8wdb:D (2.86) BS01 ATP N/A N/A I6Y482 N/A
    452041 8wdb:D (2.86) BS02 ATP N/A N/A I6Y482 N/A
    452042 8wdd:A (3.9) BS01 VZK N/A N/A P02769 N/A
    452043 8wdd:A (3.9) BS02 VZK N/A N/A P02769 N/A
    452044 8wdd:B (3.9) BS01 VZK N/A N/A P02769 N/A
    452045 8wdg:A (0.99) BS03 XYL 5.3.1.5 GO:0000287 ... P24300 37793321
    452046 8wdk:V (3.64) BS01 W6U N/A N/A P40337 N/A
    452047 8wdk:W (3.64) BS01 W6U N/A N/A P30291 N/A
    452048 8wdn:A (1.55) BS02 W8E N/A N/A Q08499 38489246
    452049 8wdn:B (1.55) BS02 W8E N/A N/A Q08499 38489246
    452050 8wdo:A (1.67) BS02 W8O N/A N/A Q08499 38489246
    452051 8wdo:B (1.67) BS02 W8O N/A N/A Q08499 38489246
    452052 8wdq:A (2.2) BS01 IPD N/A N/A Q9HXI4 N/A
    452053 8wdq:B (2.2) BS01 IPD N/A N/A Q9HXI4 N/A
    452054 8wdt:A (3.34) BS01 WCH ? GO:0001609 ... P29274 38171234
    452055 8wdu:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452056 8wdu:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452057 8wdu:0 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452058 8wdu:1 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452059 8wdu:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452060 8wdu:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452061 8wdu:1 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452062 8wdu:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452063 8wdu:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452064 8wdu:2 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452065 8wdu:3 (2.24) BS01 Z41 ? GO:0005886 ... D3RP67 38347078
    452066 8wdu:3 (2.24) BS02 CRT ? GO:0005886 ... D3RP67 38347078
    452067 8wdu:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    452068 8wdu:3 (2.24) BS04 BCL ? GO:0005886 ... D3RP67 38347078
    452069 8wdu:3 (2.24) BS05 CRT ? GO:0005886 ... D3RP67 38347078
    452070 8wdu:3 (2.24) BS06 BCL ? GO:0005886 ... D3RP67 38347078
    452071 8wdu:3 (2.24) BS07 CRT ? GO:0005886 ... D3RP67 38347078
    452072 8wdu:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452073 8wdu:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452074 8wdu:4 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452075 8wdu:5 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452076 8wdu:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452077 8wdu:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452078 8wdu:5 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452079 8wdu:5 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452080 8wdu:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452081 8wdu:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452082 8wdu:6 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452083 8wdu:7 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    452084 8wdu:7 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    452085 8wdu:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452086 8wdu:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    452087 8wdu:7 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452088 8wdu:7 (2.24) BS06 BCL ? GO:0005886 ... D3RP69 38347078
    452089 8wdu:7 (2.24) BS07 CRT ? GO:0005886 ... D3RP69 38347078
    452090 8wdu:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452091 8wdu:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452092 8wdu:8 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452093 8wdu:9 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    452094 8wdu:9 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    452095 8wdu:9 (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    452096 8wdu:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    452097 8wdu:9 (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    452098 8wdu:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    452099 8wdu:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452100 8wdu:A (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    452101 8wdu:A (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452102 8wdu:A (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452103 8wdu:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452104 8wdu:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452105 8wdu:B (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452106 8wdu:C (2.24) BS01 HEM ? GO:0005506 ... O82947 38347078
    452107 8wdu:C (2.24) BS02 HEM ? GO:0005506 ... O82947 38347078
    452108 8wdu:C (2.24) BS03 HEM ? GO:0005506 ... O82947 38347078
    452109 8wdu:C (2.24) BS04 HEM ? GO:0005506 ... O82947 38347078
    452110 8wdu:C (2.24) BS06 Z41 ? GO:0005506 ... O82947 38347078
    452111 8wdu:D (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452112 8wdu:D (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452113 8wdu:D (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452114 8wdu:D (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452115 8wdu:D (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452116 8wdu:E (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452117 8wdu:E (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452118 8wdu:E (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452119 8wdu:F (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452120 8wdu:F (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452121 8wdu:F (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452122 8wdu:F (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452123 8wdu:F (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    452124 8wdu:F (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    452125 8wdu:G (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452126 8wdu:G (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452127 8wdu:G (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452128 8wdu:I (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452129 8wdu:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452130 8wdu:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452131 8wdu:I (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452132 8wdu:I (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452133 8wdu:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452134 8wdu:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452135 8wdu:J (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452136 8wdu:K (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452137 8wdu:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452138 8wdu:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452139 8wdu:K (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452140 8wdu:L (2.24) BS01 BCL ? GO:0009772 ... P51762 38347078
    452141 8wdu:L (2.24) BS02 BPH ? GO:0009772 ... P51762 38347078
    452142 8wdu:L (2.24) BS03 UQ8 ? GO:0009772 ... P51762 38347078
    452143 8wdu:L (2.24) BS04 UQ8 ? GO:0009772 ... P51762 38347078
    452144 8wdu:L (2.24) BS05 BCL ? GO:0009772 ... P51762 38347078
    452145 8wdu:L (2.24) BS06 UQ8 ? GO:0009772 ... P51762 38347078
    452146 8wdu:L (2.24) BS08 BCL ? GO:0009772 ... P51762 38347078
    452147 8wdu:L (2.24) BS09 BPH ? GO:0009772 ... P51762 38347078
    452148 8wdu:L (2.24) BS10 MQ8 ? GO:0009772 ... P51762 38347078
    452149 8wdu:M (2.24) BS01 BPH ? GO:0009772 ... P51763 38347078
    452150 8wdu:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    452151 8wdu:M (2.24) BS03 UQ8 ? GO:0009772 ... P51763 38347078
    452152 8wdu:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    452153 8wdu:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    452154 8wdu:M (2.24) BS07 BPH ? GO:0009772 ... P51763 38347078
    452155 8wdu:M (2.24) BS08 MQ8 ? GO:0009772 ... P51763 38347078
    452156 8wdu:M (2.24) BS09 CRT ? GO:0009772 ... P51763 38347078
    452157 8wdu:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452158 8wdu:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452159 8wdu:N (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452160 8wdu:O (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452161 8wdu:O (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    452162 8wdu:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452163 8wdu:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    452164 8wdu:O (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    452165 8wdu:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452166 8wdu:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452167 8wdu:P (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452168 8wdu:Q (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    452169 8wdu:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    452170 8wdu:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    452171 8wdu:Q (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    452172 8wdu:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    452173 8wdu:Q (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    452174 8wdu:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    452175 8wdu:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    452176 8wdu:R (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    452177 8wdu:S (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    452178 8wdu:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    452179 8wdu:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    452180 8wdu:S (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    452181 8wdu:S (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452182 8wdu:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452183 8wdu:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452184 8wdu:T (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452185 8wdu:U (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    452186 8wdu:U (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    452187 8wdu:U (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    452188 8wdu:U (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    452189 8wdu:U (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452190 8wdu:U (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    452191 8wdu:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    452192 8wdu:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    452193 8wdu:V (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    452194 8wdu:W (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    452195 8wdu:W (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    452196 8wdu:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    452197 8wdu:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    452198 8wdu:W (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    452199 8wdu:W (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    452200 8wdu:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218