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BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    445001 8tb7:R (2.94) BS01 ZOB ? GO:0004930 ... P0ABE7
    Q9BZJ8
    37741852
    445002 8tb9:E (4.0) BS02 SAH N/A N/A Q15910 N/A
    445003 8tba:A (1.65) BS01 ZMX N/A GO:0008360 ... Q9ZLT0 N/A
    445004 8tba:A (1.65) BS02 DGL N/A GO:0008360 ... Q9ZLT0 N/A
    445005 8tba:B (1.65) BS01 DGL N/A GO:0008360 ... Q9ZLT0 N/A
    445006 8tbe:A (2.15) BS01 ZQB 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37800975
    445007 8tbe:B (2.15) BS01 ZQB 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37800975
    445008 8tbf:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445009 8tbf:A (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445010 8tbf:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445011 8tbf:B (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445012 8tbf:C (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445013 8tbf:D (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445014 8tbg:A (1.2) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 38589574
    445015 8tbg:A (1.2) BS03 ZNI 3.6.5.2 GO:0003924 ... P01112 38589574
    445016 8tbg:B (1.2) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 38589574
    445017 8tbg:B (1.2) BS03 ZNI 3.6.5.2 GO:0003924 ... P01112 38589574
    445018 8tbg:C (1.2) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445019 8tbg:D (1.2) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445020 8tbh:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445021 8tbh:A (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445022 8tbh:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445023 8tbh:B (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445024 8tbh:C (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445025 8tbh:D (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445026 8tbi:A (1.59) BS01 GNP 3.6.5.2 GO:0000139 ... P01111 38589574
    445027 8tbi:A (1.59) BS03 ZNI 3.6.5.2 GO:0000139 ... P01111 38589574
    445028 8tbi:B (1.59) BS01 GNP 3.6.5.2 GO:0000139 ... P01111 38589574
    445029 8tbi:B (1.59) BS03 ZNI 3.6.5.2 GO:0000139 ... P01111 38589574
    445030 8tbi:C (1.59) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445031 8tbi:D (1.59) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445032 8tbj:A (1.45) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445033 8tbj:A (1.45) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445034 8tbj:B (1.45) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445035 8tbj:B (1.45) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445036 8tbj:C (1.45) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445037 8tbj:D (1.45) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445038 8tbk:A (1.26) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445039 8tbk:A (1.26) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445040 8tbk:B (1.26) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445041 8tbk:B (1.26) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445042 8tbk:C (1.26) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445043 8tbk:D (1.26) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445044 8tbl:A (1.88) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445045 8tbl:A (1.88) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445046 8tbl:B (1.88) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445047 8tbl:B (1.88) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445048 8tbl:C (1.88) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445049 8tbl:D (1.88) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445050 8tbm:A (1.57) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445051 8tbm:A (1.57) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445052 8tbm:B (1.57) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445053 8tbm:B (1.57) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445054 8tbm:C (1.57) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445055 8tbm:D (1.57) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445056 8tbn:A (1.46) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445057 8tbn:A (1.46) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445058 8tbn:B (1.46) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    445059 8tbn:B (1.46) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    445060 8tbn:C (1.46) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445061 8tbn:D (1.46) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    445062 8tbr:A (1.75) BS01 NAP N/A N/A A0PQG8 N/A
    445063 8tbr:A (1.75) BS02 HIJ N/A N/A A0PQG8 N/A
    445064 8tbs:A (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445065 8tbs:A (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445066 8tbs:A (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445067 8tbs:B (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445068 8tbs:B (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445069 8tbs:B (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445070 8tbs:C (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445071 8tbs:C (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445072 8tbs:C (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445073 8tbs:D (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445074 8tbs:D (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445075 8tbs:D (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445076 8tbs:E (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445077 8tbs:E (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445078 8tbs:E (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445079 8tbs:F (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445080 8tbs:F (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445081 8tbs:F (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445082 8tbs:G (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445083 8tbs:G (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445084 8tbs:G (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445085 8tbs:H (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    445086 8tbs:H (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445087 8tbs:H (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445088 8tbt:A (2.34) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445089 8tbt:A (2.34) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445090 8tbt:A (2.34) BS04 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    445091 8tbt:B (2.34) BS01 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    445092 8tbt:B (2.34) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445093 8tbt:B (2.34) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445094 8tbt:C (2.34) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445095 8tbt:C (2.34) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445096 8tbt:C (2.34) BS04 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    445097 8tbt:D (2.34) BS01 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    445098 8tbt:D (2.34) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445099 8tbt:D (2.34) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445100 8tbu:A (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445101 8tbu:A (2.35) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445102 8tbu:A (2.35) BS03 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445103 8tbu:B (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445104 8tbu:B (2.35) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445105 8tbu:B (2.35) BS03 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445106 8tbu:C (2.35) BS01 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445107 8tbu:C (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445108 8tbu:C (2.35) BS04 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445109 8tbu:D (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445110 8tbu:D (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445111 8tbu:E (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445112 8tbu:E (2.35) BS03 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445113 8tbu:F (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445114 8tbu:F (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445115 8tbu:G (2.35) BS01 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    445116 8tbu:G (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445117 8tbu:G (2.35) BS04 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445118 8tbu:H (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    445119 8tbu:H (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    445120 8tbx:A (2.71) BS01 ADP 3.6.4.13 GO:0003676 ... Q92499 N/A
    445121 8tc0:A (1.88) BS01 EIC ? GO:0016020 ... U5WI05 38805567
    445122 8tc0:B (1.88) BS01 FUC ? GO:0016020 ... U5WI05 38805567
    445123 8tc0:B (1.88) BS02 EIC ? GO:0016020 ... U5WI05 38805567
    445124 8tc0:C (1.88) BS01 EIC ? GO:0016020 ... U5WI05 38805567
    445125 8tc1:A (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    445126 8tc1:B (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    445127 8tc1:C (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    445128 8tc3:A (2.57) BS01 SF4 ?
    1.18.6.1
    GO:0005524 ... P00459
    Q5S3G7
    38575747
    445129 8tc3:B (2.57) BS01 SF4 ?
    1.18.6.1
    GO:0005524 ... P00459
    Q5S3G7
    38575747
    445130 8tc5:A (2.11) BS01 EIC N/A GO:0016020 ... P59594 38805567
    445131 8tc5:B (2.11) BS01 EIC N/A GO:0016020 ... P59594 38805567
    445132 8tc5:C (2.11) BS01 FUC N/A GO:0016020 ... P59594 38805567
    445133 8tc5:C (2.11) BS02 EIC N/A GO:0016020 ... P59594 38805567
    445134 8tc8:A (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    445135 8tc8:B (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    445136 8tc8:C (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    445137 8tc8:D (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    445138 8tc9:A (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    445139 8tc9:B (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    445140 8tc9:C (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    445141 8tc9:D (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    445142 8tcc:A (3.1) BS02 SO3 N/A GO:0003933 ... A0A069BB45 N/A
    445143 8tcc:B (3.1) BS01 ZS9 N/A GO:0003933 ... A0A069BB45 N/A
    445144 8tcc:C (3.1) BS01 ZS9 N/A GO:0003933 ... A0A069BB45 N/A
    445145 8tcc:D (3.1) BS01 ZS9 N/A GO:0003933 ... A0A069BB45 N/A
    445146 8tce:A (1.07) BS01 HWF 3.4.21.- N/A P08519 38720069
    445147 8tce:B (1.07) BS01 HWF 3.4.21.- N/A P08519 38720069
    445148 8tci:A (3.19) BS03 SAH N/A N/A P0DOY1 39098534
    445149 8tci:D (3.19) BS03 SAH N/A N/A P0DOY1 39098534
    445150 8tcl:B (1.95) BS01 TNF N/A N/A P04585 N/A
    445151 8tcl:B (1.95) BS02 TNF N/A N/A P04585 N/A
    445152 8tcl:B (1.95) BS03 TNF N/A N/A P04585 N/A
    445153 8tcm:B (1.82) BS01 TNF N/A N/A P04585 N/A
    445154 8tcm:B (1.82) BS02 TNF N/A N/A P04585 N/A
    445155 8tcm:B (1.82) BS03 TNF N/A N/A P04585 N/A
    445156 8tcm:B (1.82) BS04 ZQT N/A N/A P04585 N/A
    445157 8tcm:B (1.82) BS05 ZQT N/A N/A P04585 N/A
    445158 8tcr:A (2.08) BS02 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445159 8tcr:A (2.08) BS03 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445160 8tcr:B (2.08) BS02 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445161 8tcr:B (2.08) BS03 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445162 8tcr:B (2.08) BS04 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445163 8tcr:C (2.08) BS01 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445164 8tcr:D (2.08) BS02 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445165 8tcr:D (2.08) BS03 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445166 8tcr:D (2.08) BS04 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    445167 8tcs:A (1.5) BS01 GLC N/A N/A N/A 38898276
    445168 8tcs:B (1.5) BS01 GLC N/A N/A N/A 38898276
    445169 8tcs:C (1.5) BS01 GLC N/A N/A N/A 38898276
    445170 8tcs:D (1.5) BS01 GLC N/A N/A N/A 38898276
    445171 8tct:A (1.86) BS01 UC6 ? GO:0016853 ... Q8A5T2 38898276
    445172 8tcu:A (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445173 8tcu:A (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445174 8tcu:B (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445175 8tcu:B (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445176 8tcu:C (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445177 8tcu:C (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445178 8tcu:D (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445179 8tcu:D (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445180 8tcu:E (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    445181 8tcv:B (1.74) BS01 ZR0 1.5.1.2 GO:0004735 ... P32322 38411104
    445182 8tcw:A (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445183 8tcw:A (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445184 8tcw:B (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445185 8tcw:B (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445186 8tcw:C (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445187 8tcw:C (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445188 8tcw:D (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445189 8tcw:D (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445190 8tcw:E (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    445191 8tcx:A (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    445192 8tcx:A (1.72) BS02 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    445193 8tcx:B (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    445194 8tcx:C (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    445195 8tcx:C (1.72) BS02 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    445196 8tcx:D (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    445197 8tcy:A (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    445198 8tcy:B (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    445199 8tcy:C (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    445200 8tcy:D (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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