Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 2199 2200 2201 2202 2203 2204 2205 2206 2207 2208 2209 2210 2211 2212 2213 2214 2215 2216 2217 2218 2219 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    441601 8sdb:A (3.0) BS04 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441602 8sdb:A (3.0) BS05 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441603 8sdb:A (3.0) BS06 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441604 8sdb:A (3.0) BS07 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441605 8sdb:A (3.0) BS08 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441606 8sdb:A (3.0) BS09 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441607 8sdb:B (3.0) BS01 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441608 8sdb:B (3.0) BS02 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441609 8sdb:B (3.0) BS03 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441610 8sdb:B (3.0) BS04 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441611 8sdb:B (3.0) BS05 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441612 8sdb:B (3.0) BS06 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441613 8sdb:C (3.0) BS01 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441614 8sdb:C (3.0) BS02 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441615 8sdb:C (3.0) BS03 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441616 8sdb:C (3.0) BS04 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    441617 8sdr:A (1.35) BS01 CB4 3.5.2.6 GO:0008800 ... P24735 37850746
    441618 8sds:A (1.63) BS01 CB4 3.5.2.6 GO:0008800 ... P24735 37850746
    441619 8sdt:A (1.38) BS01 ZXM 3.5.2.6 GO:0008800 ... P24735 37850746
    441620 8sdv:A (1.42) BS01 ZXM 3.5.2.6 GO:0008800 ... P24735 37850746
    441621 8sdw:A (1.75) BS01 G3D 3.6.5.2 GO:0000139 ... P84077 38574162
    441622 8sdz:A (2.86) BS01 RTO ? GO:0005452 ... O35956 37845412
    441623 8se5:A (1.43) BS01 ZW7 ? GO:0045954 ... P26718 37778428
    441624 8se5:B (1.43) BS01 ZW7 ? GO:0045954 ... P26718 37778428
    441625 8se6:A (1.36) BS01 ZWA ? GO:0045954 ... P26718 37778428
    441626 8se6:B (1.36) BS01 ZWA ? GO:0045954 ... P26718 37778428
    441627 8se9:A (3.2) BS01 AMP 6.2.1.- GO:0004842 ... P41226 37553340
    441628 8sea:A (3.4) BS01 AMP 6.2.1.- GO:0004842 ... P41226 37553340
    441629 8seb:A (3.24) BS01 AMP 6.2.1.- GO:0004842 ... P41226 37553340
    441630 8seo:A (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    441631 8seo:B (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    441632 8seo:C (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    441633 8seo:D (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    441634 8sep:A (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    441635 8sep:B (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    441636 8sep:C (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    441637 8sep:D (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    441638 8seq:A (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614
    441639 8seq:B (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614
    441640 8seq:C (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614
    441641 8seq:D (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614
    441642 8ser:A (3.42) BS01 ADN ? GO:0003151 ... P11716 37192614
    441643 8ser:B (3.42) BS01 ADN ? GO:0003151 ... P11716 37192614
    441644 8ser:C (3.42) BS01 ADN ? GO:0003151 ... P11716 37192614
    441645 8ser:D (3.42) BS01 ADN ? GO:0003151 ... P11716 37192614
    441646 8ses:A (3.98) BS02 ADE ? GO:0003151 ... P11716 37192614
    441647 8ses:B (3.98) BS02 ADE ? GO:0003151 ... P11716 37192614
    441648 8ses:C (3.98) BS02 ADE ? GO:0003151 ... P11716 37192614
    441649 8ses:D (3.98) BS02 ADE ? GO:0003151 ... P11716 37192614
    441650 8set:A (3.42) BS01 CMP ? GO:0003151 ... P11716 37192614
    441651 8set:B (3.42) BS01 CMP ? GO:0003151 ... P11716 37192614
    441652 8set:C (3.42) BS01 CMP ? GO:0003151 ... P11716 37192614
    441653 8set:D (3.42) BS01 CMP ? GO:0003151 ... P11716 37192614
    441654 8sev:A (3.17) BS01 AGS ? GO:0003151 ... P11716 37192614
    441655 8sev:B (3.17) BS01 AGS ? GO:0003151 ... P11716 37192614
    441656 8sev:C (3.17) BS01 AGS ? GO:0003151 ... P11716 37192614
    441657 8sev:D (3.17) BS01 AGS ? GO:0003151 ... P11716 37192614
    441658 8sew:A (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    441659 8sew:B (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    441660 8sew:C (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    441661 8sew:D (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    441662 8sex:A (2.84) BS01 AMP ? GO:0003151 ... P11716 37192614
    441663 8sex:B (2.84) BS01 AMP ? GO:0003151 ... P11716 37192614
    441664 8sex:C (2.84) BS01 AMP ? GO:0003151 ... P11716 37192614
    441665 8sex:D (2.84) BS01 AMP ? GO:0003151 ... P11716 37192614
    441666 8sey:A (2.99) BS01 ADN ? GO:0003151 ... P11716 37192614
    441667 8sey:B (2.99) BS01 ADN ? GO:0003151 ... P11716 37192614
    441668 8sey:C (2.99) BS01 ADN ? GO:0003151 ... P11716 37192614
    441669 8sey:D (2.99) BS01 ADN ? GO:0003151 ... P11716 37192614
    441670 8sez:A (3.54) BS01 ADE ? GO:0003151 ... P11716 37192614
    441671 8sez:B (3.54) BS01 ADE ? GO:0003151 ... P11716 37192614
    441672 8sez:C (3.54) BS01 ADE ? GO:0003151 ... P11716 37192614
    441673 8sez:D (3.54) BS01 ADE ? GO:0003151 ... P11716 37192614
    441674 8sf0:A (2.9) BS01 CMP ? GO:0003151 ... P11716 37192614
    441675 8sf0:B (2.9) BS01 CMP ? GO:0003151 ... P11716 37192614
    441676 8sf0:C (2.9) BS01 CMP ? GO:0003151 ... P11716 37192614
    441677 8sf0:D (2.9) BS01 CMP ? GO:0003151 ... P11716 37192614
    441678 8sf3:A (1.7) BS01 AMP 6.2.1.1 GO:0003987 ... A4I093 N/A
    441679 8sf3:A (1.7) BS02 COA 6.2.1.1 GO:0003987 ... A4I093 N/A
    441680 8sf7:AA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441681 8sf7:AB (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    441682 8sf7:AB (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    441683 8sf7:AC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441684 8sf7:AD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441685 8sf7:AE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441686 8sf7:AF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441687 8sf7:AG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441688 8sf7:AH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441689 8sf7:AI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441690 8sf7:AJ (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    441691 8sf7:AJ (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    441692 8sf7:AK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441693 8sf7:AL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441694 8sf7:AM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441695 8sf7:AN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441696 8sf7:BA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441697 8sf7:BB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441698 8sf7:BC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441699 8sf7:BD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441700 8sf7:BE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441701 8sf7:BF (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    441702 8sf7:BF (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    441703 8sf7:BG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441704 8sf7:BH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441705 8sf7:BI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441706 8sf7:BJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441707 8sf7:BK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441708 8sf7:BL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441709 8sf7:BM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441710 8sf7:BN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441711 8sf7:CA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441712 8sf7:CB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441713 8sf7:CC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441714 8sf7:CD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441715 8sf7:CE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441716 8sf7:CF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441717 8sf7:CG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441718 8sf7:CH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441719 8sf7:CH (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    441720 8sf7:CI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441721 8sf7:CJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441722 8sf7:CK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441723 8sf7:CL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441724 8sf7:CL (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    441725 8sf7:CM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441726 8sf7:CN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441727 8sf7:DA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441728 8sf7:DB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441729 8sf7:DB (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    441730 8sf7:DC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441731 8sf7:DD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441732 8sf7:DD (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    441733 8sf7:DE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441734 8sf7:DF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441735 8sf7:DG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441736 8sf7:DH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441737 8sf7:DI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441738 8sf7:DJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441739 8sf7:DK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441740 8sf7:DL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441741 8sf7:DM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441742 8sf7:DN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441743 8sf7:EA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441744 8sf7:EB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441745 8sf7:EC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441746 8sf7:ED (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441747 8sf7:ED (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    441748 8sf7:EE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441749 8sf7:EF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441750 8sf7:EF (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    441751 8sf7:EG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441752 8sf7:EH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441753 8sf7:EI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441754 8sf7:EJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441755 8sf7:EK (4.1) BS02 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441756 8sf7:EL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441757 8sf7:EM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441758 8sf7:EN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441759 8sf7:FA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441760 8sf7:FB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441761 8sf7:FC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441762 8sf7:FD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441763 8sf7:FE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441764 8sf7:FF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441765 8sf7:FG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441766 8sf7:FH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441767 8sf7:FI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441768 8sf7:FJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441769 8sf7:FK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441770 8sf7:FL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441771 8sf7:FM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441772 8sf7:FN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441773 8sf7:GA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441774 8sf7:GB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441775 8sf7:GC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441776 8sf7:GD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    441777 8sf7:GD (4.1) BS03 GDP ? GO:0000226 ... P41352 38598282
    441778 8sf7:GE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441779 8sf7:GF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441780 8sf7:GG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441781 8sf7:GH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441782 8sf7:GI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441783 8sf7:GJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441784 8sf7:GK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441785 8sf7:GL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    441786 8sf7:GL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    441787 8sf7:GM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441788 8sf7:GN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441789 8sf7:HA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441790 8sf7:HB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441791 8sf7:HC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441792 8sf7:HD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    441793 8sf7:HD (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    441794 8sf7:HE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441795 8sf7:HF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441796 8sf7:HG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441797 8sf7:HH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441798 8sf7:HI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    441799 8sf7:HJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    441800 8sf7:HK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218