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BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    434201 8opn:C (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    434202 8opo:A (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    434203 8opo:B (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    434204 8opo:C (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    434205 8opp:A (3.76) BS02 P5E N/A GO:0001556 ... Q5VYS8 39054354
    434206 8opu:A (3.04) BS01 08D 1.1.1.35 GO:0000166 ... O53872 39012716
    434207 8opu:B (3.04) BS01 08D 1.1.1.35 GO:0000166 ... O53872 39012716
    434208 8opu:B (3.04) BS02 08D 1.1.1.35 GO:0000166 ... O53872 39012716
    434209 8opu:C (3.04) BS01 08D 2.3.1.- GO:0005886 ... O53871 39012716
    434210 8opu:D (3.04) BS01 08D 2.3.1.- GO:0005886 ... O53871 39012716
    434211 8opv:A (2.8) BS01 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    434212 8opv:A (2.8) BS02 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    434213 8opv:B (2.8) BS01 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    434214 8opv:B (2.8) BS02 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    434215 8opx:C (2.9) BS01 GLC 2.3.1.- GO:0005886 ... O53871 39012716
    434216 8opx:D (2.9) BS01 GLC 2.3.1.- GO:0005886 ... O53871 39012716
    434217 8opx:D (2.9) BS02 GLC 2.3.1.- GO:0005886 ... O53871 39012716
    434218 8opy:D (2.45) BS01 DNQ 2.3.1.- GO:0005886 ... O53871 39012716
    434219 8oq2:A (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434220 8oq2:B (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434221 8oq2:B (1.91) BS02 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434222 8oq2:B (1.91) BS03 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434223 8oq2:B (1.91) BS04 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434224 8oq2:C (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434225 8oq2:C (1.91) BS02 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434226 8oq2:D (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434227 8oq2:E (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434228 8oq2:F (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    434229 8oq6:A (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    434230 8oq6:B (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    434231 8oq6:C (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    434232 8oq6:D (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    434233 8oq6:E (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    434234 8oq7:A (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    434235 8oq7:B (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    434236 8oq7:C (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    434237 8oq7:D (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    434238 8oq7:E (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    434239 8oq8:A (2.9) BS01 RI5 ? GO:0004888 ... P24046 37659407
    434240 8oq8:E (2.9) BS01 RI5 ? GO:0004888 ... P24046 37659407
    434241 8oqa:A (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    434242 8oqa:A (2.9) BS02 RI5 ? GO:0004888 ... P24046 37659407
    434243 8oqa:B (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    434244 8oqa:B (2.9) BS02 RI5 ? GO:0004888 ... P24046 37659407
    434245 8oqa:C (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    434246 8oqa:D (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    434247 8oqa:D (2.9) BS02 ABU ? GO:0004888 ... P24046 37659407
    434248 8oqa:E (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    434249 8oqc:A (1.5) BS01 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    434250 8oqc:A (1.5) BS02 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    434251 8oqd:A (1.54) BS01 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    434252 8oqd:A (1.54) BS02 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    434253 8oqe:A (1.5) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    434254 8oqe:A (1.5) BS02 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    434255 8oqf:A (1.5) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    434256 8oqg:A (1.6) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    434257 8oqg:A (1.6) BS02 VW5 4.6.1.18 GO:0003676 ... P61823 37144589
    434258 8oql:A (2.7) BS01 ARF 1.1.1.35 GO:0000166 ... O53872 39012716
    434259 8oql:A (2.7) BS02 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434260 8oql:A (2.7) BS03 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434261 8oql:A (2.7) BS04 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434262 8oql:A (2.7) BS05 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434263 8oql:A (2.7) BS06 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434264 8oql:A (2.7) BS07 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434265 8oql:B (2.7) BS01 ARF 1.1.1.35 GO:0000166 ... O53872 39012716
    434266 8oql:B (2.7) BS02 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434267 8oql:B (2.7) BS03 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434268 8oql:B (2.7) BS04 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434269 8oql:B (2.7) BS05 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434270 8oql:B (2.7) BS06 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434271 8oql:B (2.7) BS07 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434272 8oql:B (2.7) BS08 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    434273 8oql:C (2.7) BS01 A9J 2.3.1.- GO:0005886 ... O53871 39012716
    434274 8oql:C (2.7) BS02 A9J 2.3.1.- GO:0005886 ... O53871 39012716
    434275 8oql:D (2.7) BS01 A9J 2.3.1.- GO:0005886 ... O53871 39012716
    434276 8oql:D (2.7) BS02 A9J 2.3.1.- GO:0005886 ... O53871 39012716
    434277 8oql:D (2.7) BS03 A9J 2.3.1.- GO:0005886 ... O53871 39012716
    434278 8oqm:D (3.2) BS01 VWO 2.3.1.- GO:0005886 ... O53871 39012716
    434279 8oqn:A (2.2) BS01 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434280 8oqn:A (2.2) BS02 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434281 8oqn:A (2.2) BS03 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434282 8oqn:A (2.2) BS04 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434283 8oqn:A (2.2) BS05 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434284 8oqn:A (2.2) BS06 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434285 8oqn:B (2.2) BS01 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434286 8oqn:B (2.2) BS02 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434287 8oqn:B (2.2) BS03 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434288 8oqn:B (2.2) BS04 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434289 8oqn:B (2.2) BS05 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434290 8oqn:B (2.2) BS06 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    434291 8oqo:A (2.6) BS01 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    434292 8oqo:A (2.6) BS02 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    434293 8oqo:B (2.6) BS01 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    434294 8oqo:B (2.6) BS02 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    434295 8oqo:B (2.6) BS03 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    434296 8oqo:C (2.6) BS01 VXH 2.3.1.- GO:0005886 ... O53871 39012716
    434297 8oqo:D (2.6) BS01 VXH 2.3.1.- GO:0005886 ... O53871 39012716
    434298 8oqp:A (2.18) BS01 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434299 8oqp:A (2.18) BS02 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434300 8oqp:A (2.18) BS03 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434301 8oqp:A (2.18) BS04 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434302 8oqp:A (2.18) BS05 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434303 8oqp:A (2.18) BS06 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434304 8oqp:A (2.18) BS07 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434305 8oqp:B (2.18) BS01 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434306 8oqp:B (2.18) BS02 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434307 8oqp:B (2.18) BS03 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434308 8oqp:B (2.18) BS04 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434309 8oqp:B (2.18) BS05 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434310 8oqp:B (2.18) BS06 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434311 8oqp:B (2.18) BS07 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434312 8oqp:C (2.18) BS01 VXZ 2.3.1.- GO:0005886 ... O53871 39012716
    434313 8oqp:C (2.18) BS02 VXZ 2.3.1.- GO:0005886 ... O53871 39012716
    434314 8oqp:D (2.18) BS01 VXZ 2.3.1.- GO:0005886 ... O53871 39012716
    434315 8oqp:D (2.18) BS02 VXZ 2.3.1.- GO:0005886 ... O53871 39012716
    434316 8oqp:D (2.18) BS03 VXZ 2.3.1.- GO:0005886 ... O53871 39012716
    434317 8oqp:D (2.18) BS04 VXZ 2.3.1.- GO:0005886 ... O53871 39012716
    434318 8oqq:A (2.59) BS01 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    434319 8oqq:A (2.59) BS02 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    434320 8oqq:B (2.59) BS01 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    434321 8oqq:B (2.59) BS02 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    434322 8oqr:A (2.4) BS01 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    434323 8oqr:A (2.4) BS02 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    434324 8oqr:A (2.4) BS03 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    434325 8oqr:A (2.4) BS04 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    434326 8oqr:B (2.4) BS01 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    434327 8oqr:B (2.4) BS02 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    434328 8oqs:A (2.33) BS01 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434329 8oqs:A (2.33) BS02 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434330 8oqs:A (2.33) BS03 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434331 8oqs:A (2.33) BS04 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434332 8oqs:A (2.33) BS05 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434333 8oqs:A (2.33) BS06 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434334 8oqs:A (2.33) BS07 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434335 8oqs:B (2.33) BS01 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434336 8oqs:B (2.33) BS02 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434337 8oqs:B (2.33) BS03 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434338 8oqs:B (2.33) BS04 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434339 8oqs:B (2.33) BS05 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434340 8oqs:B (2.33) BS06 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434341 8oqs:B (2.33) BS07 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    434342 8oqs:C (2.33) BS01 VWZ 2.3.1.- GO:0005886 ... O53871 39012716
    434343 8oqs:D (2.33) BS01 VWZ 2.3.1.- GO:0005886 ... O53871 39012716
    434344 8oqt:A (2.62) BS01 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    434345 8oqt:A (2.62) BS02 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    434346 8oqt:A (2.62) BS03 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    434347 8oqt:B (2.62) BS01 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    434348 8oqt:B (2.62) BS02 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    434349 8oqt:B (2.62) BS03 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    434350 8oqu:A (2.89) BS01 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    434351 8oqu:A (2.89) BS02 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    434352 8oqu:A (2.89) BS03 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    434353 8oqu:B (2.89) BS01 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    434354 8oqu:B (2.89) BS02 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    434355 8oqu:B (2.89) BS03 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    434356 8oqv:A (2.78) BS01 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434357 8oqv:A (2.78) BS02 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434358 8oqv:A (2.78) BS03 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434359 8oqv:A (2.78) BS04 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434360 8oqv:A (2.78) BS05 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434361 8oqv:B (2.78) BS01 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434362 8oqv:B (2.78) BS02 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434363 8oqv:B (2.78) BS03 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    434364 8oqx:A (2.12) BS01 ACP ? N/A G8UQH9 37481208
    434365 8oqx:B (2.12) BS01 ACP ? N/A G8UQH9 37481208
    434366 8or1:A (3.5) BS01 VYC ? N/A Q9NZQ7 37496104
    434367 8or1:B (3.5) BS01 VYC ? N/A Q9NZQ7 37496104
    434368 8or9:A (1.9) BS01 PLP 4.1.1.28 GO:0001822 ... P20711 37466248
    434369 8ora:A (2.4) BS01 PLP 4.1.1.28 GO:0001822 ... P20711 37466248
    434370 8ora:A (2.4) BS02 W5I 4.1.1.28 GO:0001822 ... P20711 37466248
    434371 8orc:A (2.1) BS01 VY8 3.1.1.7 GO:0001919 ... P21836 N/A
    434372 8orc:B (2.1) BS01 VY8 3.1.1.7 GO:0001919 ... P21836 N/A
    434373 8orc:B (2.1) BS02 MXE 3.1.1.7 GO:0001919 ... P21836 N/A
    434374 8ord:A (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    434375 8ord:B (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    434376 8ord:C (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    434377 8ord:D (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    434378 8ord:E (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    434379 8orh:A (4.2) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    434380 8orh:B (4.2) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    434381 8orm:J (1.9) BS01 V0G 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38480681
    434382 8oro:AAA (2.0) BS01 VFH 1.13.11.48 GO:0003824 ... O31266 37799987
    434383 8oro:AAA (2.0) BS02 OXY 1.13.11.48 GO:0003824 ... O31266 37799987
    434384 8oro:BBB (2.0) BS01 VFH 1.13.11.48 GO:0003824 ... O31266 37799987
    434385 8oro:BBB (2.0) BS02 OXY 1.13.11.48 GO:0003824 ... O31266 37799987
    434386 8orp:A (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    434387 8orp:A (2.0) BS02 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    434388 8orp:A (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    434389 8orp:A (2.0) BS04 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    434390 8orp:B (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    434391 8orp:B (2.0) BS02 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    434392 8orp:B (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    434393 8orp:B (2.0) BS04 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    434394 8ors:A (4.3) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    434395 8ors:B (4.3) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    434396 8oru:AAA (2.23) BS01 ADP 6.5.1.9 GO:0005524 ... O93732 38045033
    434397 8oru:AAA (2.23) BS02 DG2 6.5.1.9 GO:0005524 ... O93732 38045033
    434398 8oru:AAA (2.23) BS03 DG2 6.5.1.9 GO:0005524 ... O93732 38045033
    434399 8oru:BBB (2.23) BS01 DG2 6.5.1.9 GO:0005524 ... O93732 38045033
    434400 8oru:BBB (2.23) BS02 ADP 6.5.1.9 GO:0005524 ... O93732 38045033

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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