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BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    432001 8jzf:F (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432002 8jzf:F (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432003 8jzf:F (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432004 8jzf:F (2.7) BS13 KC1 N/A GO:0009765 ... N/A 38319970
    432005 8jzf:F (2.7) BS14 CLA N/A GO:0009765 ... N/A 38319970
    432006 8jzf:G (2.7) BS01 DD6 N/A GO:0009765 ... N/A 38319970
    432007 8jzf:G (2.7) BS02 UIX N/A GO:0009765 ... N/A 38319970
    432008 8jzf:G (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432009 8jzf:G (2.7) BS04 DD6 N/A GO:0009765 ... N/A 38319970
    432010 8jzf:G (2.7) BS05 PID N/A GO:0009765 ... N/A 38319970
    432011 8jzf:G (2.7) BS06 PID N/A GO:0009765 ... N/A 38319970
    432012 8jzf:G (2.7) BS07 CLA N/A GO:0009765 ... N/A 38319970
    432013 8jzf:G (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432014 8jzf:G (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432015 8jzf:G (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432016 8jzf:G (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432017 8jzf:G (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432018 8jzf:G (2.7) BS13 KC1 N/A GO:0009765 ... N/A 38319970
    432019 8jzf:G (2.7) BS14 CLA N/A GO:0009765 ... N/A 38319970
    432020 8jzf:G (2.7) BS15 CLA N/A GO:0009765 ... N/A 38319970
    432021 8jzf:G (2.7) BS16 CLA N/A GO:0009765 ... N/A 38319970
    432022 8jzf:G (2.7) BS17 CLA N/A GO:0009765 ... N/A 38319970
    432023 8jzf:H (2.7) BS01 PID N/A GO:0009765 ... N/A 38319970
    432024 8jzf:H (2.7) BS02 PID N/A GO:0009765 ... N/A 38319970
    432025 8jzf:H (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432026 8jzf:H (2.7) BS04 CLA N/A GO:0009765 ... N/A 38319970
    432027 8jzf:H (2.7) BS05 CLA N/A GO:0009765 ... N/A 38319970
    432028 8jzf:H (2.7) BS06 KC1 N/A GO:0009765 ... N/A 38319970
    432029 8jzf:H (2.7) BS07 CLA N/A GO:0009765 ... N/A 38319970
    432030 8jzf:H (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432031 8jzf:H (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432032 8jzf:H (2.7) BS10 KC1 N/A GO:0009765 ... N/A 38319970
    432033 8jzf:H (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432034 8jzf:H (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432035 8jzf:I (2.7) BS01 DD6 N/A GO:0009765 ... N/A 38319970
    432036 8jzf:I (2.7) BS02 DD6 N/A GO:0009765 ... N/A 38319970
    432037 8jzf:I (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432038 8jzf:I (2.7) BS04 UIX N/A GO:0009765 ... N/A 38319970
    432039 8jzf:I (2.7) BS05 DD6 N/A GO:0009765 ... N/A 38319970
    432040 8jzf:I (2.7) BS06 CLA N/A GO:0009765 ... N/A 38319970
    432041 8jzf:I (2.7) BS07 CLA N/A GO:0009765 ... N/A 38319970
    432042 8jzf:I (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432043 8jzf:I (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432044 8jzf:I (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432045 8jzf:I (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432046 8jzf:I (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432047 8jzf:I (2.7) BS13 CLA N/A GO:0009765 ... N/A 38319970
    432048 8jzf:I (2.7) BS14 KC1 N/A GO:0009765 ... N/A 38319970
    432049 8jzf:I (2.7) BS15 CLA N/A GO:0009765 ... N/A 38319970
    432050 8jzf:I (2.7) BS16 CLA N/A GO:0009765 ... N/A 38319970
    432051 8jzf:I (2.7) BS17 CLA N/A GO:0009765 ... N/A 38319970
    432052 8jzf:I (2.7) BS18 CLA N/A GO:0009765 ... N/A 38319970
    432053 8jzf:J (2.7) BS01 CLA N/A GO:0009765 ... N/A 38319970
    432054 8jzf:J (2.7) BS02 CLA N/A GO:0009765 ... N/A 38319970
    432055 8jzf:J (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432056 8jzf:J (2.7) BS04 DD6 N/A GO:0009765 ... N/A 38319970
    432057 8jzf:J (2.7) BS05 DD6 N/A GO:0009765 ... N/A 38319970
    432058 8jzf:J (2.7) BS06 UIX N/A GO:0009765 ... N/A 38319970
    432059 8jzf:J (2.7) BS07 CLA N/A GO:0009765 ... N/A 38319970
    432060 8jzf:J (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432061 8jzf:J (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432062 8jzf:J (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432063 8jzf:J (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432064 8jzf:J (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432065 8jzf:J (2.7) BS13 KC1 N/A GO:0009765 ... N/A 38319970
    432066 8jzf:J (2.7) BS14 CLA N/A GO:0009765 ... N/A 38319970
    432067 8jzf:J (2.7) BS15 CLA N/A GO:0009765 ... N/A 38319970
    432068 8jzf:K (2.7) BS01 DD6 N/A GO:0009765 ... N/A 38319970
    432069 8jzf:K (2.7) BS02 CLA N/A GO:0009765 ... N/A 38319970
    432070 8jzf:K (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432071 8jzf:K (2.7) BS04 UIX N/A GO:0009765 ... N/A 38319970
    432072 8jzf:K (2.7) BS05 DD6 N/A GO:0009765 ... N/A 38319970
    432073 8jzf:K (2.7) BS06 DD6 N/A GO:0009765 ... N/A 38319970
    432074 8jzf:K (2.7) BS07 DD6 N/A GO:0009765 ... N/A 38319970
    432075 8jzf:K (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432076 8jzf:K (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432077 8jzf:K (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432078 8jzf:K (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432079 8jzf:K (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432080 8jzf:K (2.7) BS13 CLA N/A GO:0009765 ... N/A 38319970
    432081 8jzf:K (2.7) BS14 CLA N/A GO:0009765 ... N/A 38319970
    432082 8jzf:K (2.7) BS15 CLA N/A GO:0009765 ... N/A 38319970
    432083 8jzf:K (2.7) BS16 KC1 N/A GO:0009765 ... N/A 38319970
    432084 8jzf:K (2.7) BS17 CLA N/A GO:0009765 ... N/A 38319970
    432085 8jzf:K (2.7) BS18 CLA N/A GO:0009765 ... N/A 38319970
    432086 8jzf:K (2.7) BS19 CLA N/A GO:0009765 ... N/A 38319970
    432087 8jzf:L (2.7) BS01 DD6 N/A GO:0009765 ... N/A 38319970
    432088 8jzf:L (2.7) BS02 DD6 N/A GO:0009765 ... N/A 38319970
    432089 8jzf:L (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432090 8jzf:L (2.7) BS04 DD6 N/A GO:0009765 ... N/A 38319970
    432091 8jzf:L (2.7) BS05 DD6 N/A GO:0009765 ... N/A 38319970
    432092 8jzf:L (2.7) BS06 DD6 N/A GO:0009765 ... N/A 38319970
    432093 8jzf:L (2.7) BS07 DD6 N/A GO:0009765 ... N/A 38319970
    432094 8jzf:L (2.7) BS08 KC1 N/A GO:0009765 ... N/A 38319970
    432095 8jzf:L (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432096 8jzf:L (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432097 8jzf:L (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432098 8jzf:L (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432099 8jzf:L (2.7) BS13 CLA N/A GO:0009765 ... N/A 38319970
    432100 8jzf:L (2.7) BS14 CLA N/A GO:0009765 ... N/A 38319970
    432101 8jzf:L (2.7) BS15 CLA N/A GO:0009765 ... N/A 38319970
    432102 8jzf:L (2.7) BS16 KC1 N/A GO:0009765 ... N/A 38319970
    432103 8jzf:L (2.7) BS17 CLA N/A GO:0009765 ... N/A 38319970
    432104 8jzf:L (2.7) BS18 CLA N/A GO:0009765 ... N/A 38319970
    432105 8jzf:L (2.7) BS19 CLA N/A GO:0009765 ... N/A 38319970
    432106 8jzf:M (2.7) BS01 PID N/A GO:0009765 ... N/A 38319970
    432107 8jzf:M (2.7) BS02 DD6 N/A GO:0009765 ... N/A 38319970
    432108 8jzf:M (2.7) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    432109 8jzf:M (2.7) BS04 DD6 N/A GO:0009765 ... N/A 38319970
    432110 8jzf:M (2.7) BS05 DD6 N/A GO:0009765 ... N/A 38319970
    432111 8jzf:M (2.7) BS06 DD6 N/A GO:0009765 ... N/A 38319970
    432112 8jzf:M (2.7) BS07 KC1 N/A GO:0009765 ... N/A 38319970
    432113 8jzf:M (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432114 8jzf:M (2.7) BS09 CLA N/A GO:0009765 ... N/A 38319970
    432115 8jzf:M (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432116 8jzf:M (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432117 8jzf:M (2.7) BS12 CLA N/A GO:0009765 ... N/A 38319970
    432118 8jzf:M (2.7) BS13 CLA N/A GO:0009765 ... N/A 38319970
    432119 8jzf:M (2.7) BS14 KC1 N/A GO:0009765 ... N/A 38319970
    432120 8jzf:M (2.7) BS15 CLA N/A GO:0009765 ... N/A 38319970
    432121 8jzf:M (2.7) BS16 CLA N/A GO:0009765 ... N/A 38319970
    432122 8jzf:M (2.7) BS17 CLA N/A GO:0009765 ... N/A 38319970
    432123 8jzf:M (2.7) BS18 CLA N/A GO:0009765 ... N/A 38319970
    432124 8jzf:N (2.7) BS01 CLA N/A GO:0009765 ... N/A 38319970
    432125 8jzf:N (2.7) BS02 PID N/A GO:0009765 ... N/A 38319970
    432126 8jzf:N (2.7) BS03 PID N/A GO:0009765 ... N/A 38319970
    432127 8jzf:N (2.7) BS04 DD6 N/A GO:0009765 ... N/A 38319970
    432128 8jzf:N (2.7) BS05 CLA N/A GO:0009765 ... N/A 38319970
    432129 8jzf:N (2.7) BS06 CLA N/A GO:0009765 ... N/A 38319970
    432130 8jzf:N (2.7) BS07 KC1 N/A GO:0009765 ... N/A 38319970
    432131 8jzf:N (2.7) BS08 CLA N/A GO:0009765 ... N/A 38319970
    432132 8jzf:N (2.7) BS09 KC1 N/A GO:0009765 ... N/A 38319970
    432133 8jzf:N (2.7) BS10 CLA N/A GO:0009765 ... N/A 38319970
    432134 8jzf:N (2.7) BS11 CLA N/A GO:0009765 ... N/A 38319970
    432135 8jzf:N (2.7) BS12 KC1 N/A GO:0009765 ... N/A 38319970
    432136 8jzf:a (2.7) BS01 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432137 8jzf:a (2.7) BS02 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432138 8jzf:a (2.7) BS03 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432139 8jzf:a (2.7) BS04 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432140 8jzf:a (2.7) BS05 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432141 8jzf:a (2.7) BS06 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432142 8jzf:a (2.7) BS07 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432143 8jzf:a (2.7) BS08 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432144 8jzf:a (2.7) BS09 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432145 8jzf:a (2.7) BS10 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432146 8jzf:a (2.7) BS11 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432147 8jzf:a (2.7) BS12 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432148 8jzf:a (2.7) BS13 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432149 8jzf:a (2.7) BS14 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432150 8jzf:a (2.7) BS15 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432151 8jzf:a (2.7) BS16 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432152 8jzf:a (2.7) BS17 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432153 8jzf:a (2.7) BS18 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432154 8jzf:a (2.7) BS19 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432155 8jzf:a (2.7) BS20 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432156 8jzf:a (2.7) BS21 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432157 8jzf:a (2.7) BS22 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432158 8jzf:a (2.7) BS23 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432159 8jzf:a (2.7) BS24 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432160 8jzf:a (2.7) BS25 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432161 8jzf:a (2.7) BS26 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432162 8jzf:a (2.7) BS27 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432163 8jzf:a (2.7) BS28 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432164 8jzf:a (2.7) BS29 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432165 8jzf:a (2.7) BS30 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432166 8jzf:a (2.7) BS31 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432167 8jzf:a (2.7) BS32 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432168 8jzf:a (2.7) BS33 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432169 8jzf:a (2.7) BS34 PQN 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432170 8jzf:a (2.7) BS35 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432171 8jzf:a (2.7) BS36 SF4 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432172 8jzf:a (2.7) BS37 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432173 8jzf:a (2.7) BS38 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432174 8jzf:a (2.7) BS39 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432175 8jzf:a (2.7) BS40 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432176 8jzf:a (2.7) BS41 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432177 8jzf:a (2.7) BS42 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2S9 38319970
    432178 8jzf:b (2.7) BS01 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432179 8jzf:b (2.7) BS02 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432180 8jzf:b (2.7) BS03 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432181 8jzf:b (2.7) BS04 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432182 8jzf:b (2.7) BS05 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432183 8jzf:b (2.7) BS06 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432184 8jzf:b (2.7) BS07 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432185 8jzf:b (2.7) BS08 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432186 8jzf:b (2.7) BS09 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432187 8jzf:b (2.7) BS10 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432188 8jzf:b (2.7) BS11 SF4 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432189 8jzf:b (2.7) BS12 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432190 8jzf:b (2.7) BS13 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432191 8jzf:b (2.7) BS14 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432192 8jzf:b (2.7) BS15 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432193 8jzf:b (2.7) BS16 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432194 8jzf:b (2.7) BS17 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432195 8jzf:b (2.7) BS18 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432196 8jzf:b (2.7) BS19 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432197 8jzf:b (2.7) BS20 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432198 8jzf:b (2.7) BS21 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432199 8jzf:b (2.7) BS22 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    432200 8jzf:b (2.7) BS23 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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