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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    419601 8hg3:U (2.94) BS17 CLA ? GO:0009416 ... Q3B9U7 36951548
    419602 8hg3:U (2.94) BS18 CHL ? GO:0009416 ... Q3B9U7 36951548
    419603 8hg3:U (2.94) BS19 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419604 8hg3:U (2.94) BS20 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419605 8hg3:U (2.94) BS21 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419606 8hg3:U (2.94) BS22 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419607 8hg5:P (2.9) BS01 CLA ? GO:0009416 ... Q3B9U7 36951548
    419608 8hg5:P (2.9) BS02 CLA ? GO:0009416 ... Q3B9U7 36951548
    419609 8hg5:P (2.9) BS03 CHL ? GO:0009416 ... Q3B9U7 36951548
    419610 8hg5:P (2.9) BS04 CHL ? GO:0009416 ... Q3B9U7 36951548
    419611 8hg5:P (2.9) BS05 CHL ? GO:0009416 ... Q3B9U7 36951548
    419612 8hg5:P (2.9) BS06 CHL ? GO:0009416 ... Q3B9U7 36951548
    419613 8hg5:P (2.9) BS07 KC2 ? GO:0009416 ... Q3B9U7 36951548
    419614 8hg5:P (2.9) BS08 CLA ? GO:0009416 ... Q3B9U7 36951548
    419615 8hg5:P (2.9) BS09 CLA ? GO:0009416 ... Q3B9U7 36951548
    419616 8hg5:P (2.9) BS10 CLA ? GO:0009416 ... Q3B9U7 36951548
    419617 8hg5:P (2.9) BS11 CLA ? GO:0009416 ... Q3B9U7 36951548
    419618 8hg5:P (2.9) BS12 CLA ? GO:0009416 ... Q3B9U7 36951548
    419619 8hg5:P (2.9) BS13 CHL ? GO:0009416 ... Q3B9U7 36951548
    419620 8hg5:P (2.9) BS14 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419621 8hg5:P (2.9) BS15 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419622 8hg5:P (2.9) BS16 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419623 8hg5:P (2.9) BS17 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419624 8hg5:P (2.9) BS18 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419625 8hg5:P (2.9) BS19 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419626 8hg5:P (2.9) BS20 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419627 8hg5:P (2.9) BS21 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419628 8hg5:P (2.9) BS22 CLA ? GO:0009416 ... Q3B9U7 36951548
    419629 8hg5:P (2.9) BS23 CHL ? GO:0009416 ... Q3B9U7 36951548
    419630 8hg5:Q (2.9) BS01 CHL ? GO:0009765 ... A0A090LYE8 36951548
    419631 8hg5:Q (2.9) BS02 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    419632 8hg5:Q (2.9) BS03 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419633 8hg5:Q (2.9) BS04 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419634 8hg5:Q (2.9) BS05 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419635 8hg5:Q (2.9) BS06 CHL ? GO:0009765 ... A0A090LYE8 36951548
    419636 8hg5:Q (2.9) BS07 CHL ? GO:0009765 ... A0A090LYE8 36951548
    419637 8hg5:Q (2.9) BS08 CHL ? GO:0009765 ... A0A090LYE8 36951548
    419638 8hg5:Q (2.9) BS09 KC2 ? GO:0009765 ... A0A090LYE8 36951548
    419639 8hg5:Q (2.9) BS10 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419640 8hg5:Q (2.9) BS11 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419641 8hg5:Q (2.9) BS12 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419642 8hg5:Q (2.9) BS13 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419643 8hg5:Q (2.9) BS14 CLA ? GO:0009765 ... A0A090LYE8 36951548
    419644 8hg5:Q (2.9) BS15 CHL ? GO:0009765 ... A0A090LYE8 36951548
    419645 8hg5:Q (2.9) BS16 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    419646 8hg5:Q (2.9) BS17 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    419647 8hg5:Q (2.9) BS18 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    419648 8hg5:Q (2.9) BS19 IWJ ? GO:0009765 ... A0A090LYE8 36951548
    419649 8hg5:Q (2.9) BS20 CHL ? GO:0009765 ... A0A090LYE8 36951548
    419650 8hg5:Q (2.9) BS21 IWJ ? GO:0009765 ... A0A090LYE8 36951548
    419651 8hg5:Q (2.9) BS22 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    419652 8hg5:Q (2.9) BS23 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    419653 8hg5:R (2.9) BS01 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419654 8hg5:R (2.9) BS02 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419655 8hg5:R (2.9) BS03 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419656 8hg5:R (2.9) BS04 CHL ? GO:0009416 ... Q3B9U7 36951548
    419657 8hg5:R (2.9) BS05 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419658 8hg5:R (2.9) BS06 CLA ? GO:0009416 ... Q3B9U7 36951548
    419659 8hg5:R (2.9) BS07 CLA ? GO:0009416 ... Q3B9U7 36951548
    419660 8hg5:R (2.9) BS08 CLA ? GO:0009416 ... Q3B9U7 36951548
    419661 8hg5:R (2.9) BS09 CHL ? GO:0009416 ... Q3B9U7 36951548
    419662 8hg5:R (2.9) BS10 CHL ? GO:0009416 ... Q3B9U7 36951548
    419663 8hg5:R (2.9) BS11 CHL ? GO:0009416 ... Q3B9U7 36951548
    419664 8hg5:R (2.9) BS12 CHL ? GO:0009416 ... Q3B9U7 36951548
    419665 8hg5:R (2.9) BS13 KC2 ? GO:0009416 ... Q3B9U7 36951548
    419666 8hg5:R (2.9) BS14 CLA ? GO:0009416 ... Q3B9U7 36951548
    419667 8hg5:R (2.9) BS15 CLA ? GO:0009416 ... Q3B9U7 36951548
    419668 8hg5:R (2.9) BS16 CLA ? GO:0009416 ... Q3B9U7 36951548
    419669 8hg5:R (2.9) BS17 CLA ? GO:0009416 ... Q3B9U7 36951548
    419670 8hg5:R (2.9) BS18 CLA ? GO:0009416 ... Q3B9U7 36951548
    419671 8hg5:R (2.9) BS19 CHL ? GO:0009416 ... Q3B9U7 36951548
    419672 8hg5:R (2.9) BS20 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419673 8hg5:R (2.9) BS21 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419674 8hg5:R (2.9) BS22 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419675 8hg5:R (2.9) BS23 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419676 8hg6:V (3.44) BS01 CLA ? GO:0009416 ... Q3B9U7 36951548
    419677 8hg6:V (3.44) BS02 CLA ? GO:0009416 ... Q3B9U7 36951548
    419678 8hg6:V (3.44) BS03 CLA ? GO:0009416 ... Q3B9U7 36951548
    419679 8hg6:V (3.44) BS04 CHL ? GO:0009416 ... Q3B9U7 36951548
    419680 8hg6:V (3.44) BS05 CHL ? GO:0009416 ... Q3B9U7 36951548
    419681 8hg6:V (3.44) BS06 CHL ? GO:0009416 ... Q3B9U7 36951548
    419682 8hg6:V (3.44) BS07 CHL ? GO:0009416 ... Q3B9U7 36951548
    419683 8hg6:V (3.44) BS08 KC2 ? GO:0009416 ... Q3B9U7 36951548
    419684 8hg6:V (3.44) BS09 CLA ? GO:0009416 ... Q3B9U7 36951548
    419685 8hg6:V (3.44) BS10 CLA ? GO:0009416 ... Q3B9U7 36951548
    419686 8hg6:V (3.44) BS11 CLA ? GO:0009416 ... Q3B9U7 36951548
    419687 8hg6:V (3.44) BS12 CLA ? GO:0009416 ... Q3B9U7 36951548
    419688 8hg6:V (3.44) BS13 CLA ? GO:0009416 ... Q3B9U7 36951548
    419689 8hg6:V (3.44) BS14 CHL ? GO:0009416 ... Q3B9U7 36951548
    419690 8hg6:V (3.44) BS15 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419691 8hg6:V (3.44) BS16 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419692 8hg6:V (3.44) BS17 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419693 8hg6:V (3.44) BS18 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419694 8hg6:V (3.44) BS19 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419695 8hg6:V (3.44) BS20 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419696 8hg6:V (3.44) BS21 CHL ? GO:0009416 ... Q3B9U7 36951548
    419697 8hg6:V (3.44) BS22 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419698 8hg6:W (3.44) BS01 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419699 8hg6:W (3.44) BS02 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419700 8hg6:W (3.44) BS03 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419701 8hg6:W (3.44) BS04 CLA ? GO:0009416 ... Q3B9U7 36951548
    419702 8hg6:W (3.44) BS05 CLA ? GO:0009416 ... Q3B9U7 36951548
    419703 8hg6:W (3.44) BS06 CLA ? GO:0009416 ... Q3B9U7 36951548
    419704 8hg6:W (3.44) BS07 CHL ? GO:0009416 ... Q3B9U7 36951548
    419705 8hg6:W (3.44) BS08 CHL ? GO:0009416 ... Q3B9U7 36951548
    419706 8hg6:W (3.44) BS09 CHL ? GO:0009416 ... Q3B9U7 36951548
    419707 8hg6:W (3.44) BS10 CHL ? GO:0009416 ... Q3B9U7 36951548
    419708 8hg6:W (3.44) BS11 KC2 ? GO:0009416 ... Q3B9U7 36951548
    419709 8hg6:W (3.44) BS12 CLA ? GO:0009416 ... Q3B9U7 36951548
    419710 8hg6:W (3.44) BS13 CLA ? GO:0009416 ... Q3B9U7 36951548
    419711 8hg6:W (3.44) BS14 CLA ? GO:0009416 ... Q3B9U7 36951548
    419712 8hg6:W (3.44) BS15 CLA ? GO:0009416 ... Q3B9U7 36951548
    419713 8hg6:W (3.44) BS16 CLA ? GO:0009416 ... Q3B9U7 36951548
    419714 8hg6:W (3.44) BS17 CHL ? GO:0009416 ... Q3B9U7 36951548
    419715 8hg6:W (3.44) BS18 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419716 8hg6:W (3.44) BS19 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419717 8hg6:W (3.44) BS20 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419718 8hg6:W (3.44) BS21 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419719 8hg6:W (3.44) BS22 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419720 8hg6:W (3.44) BS23 CHL ? GO:0009416 ... Q3B9U7 36951548
    419721 8hg6:X (3.44) BS01 CHL ? GO:0009416 ... Q3B9U7 36951548
    419722 8hg6:X (3.44) BS02 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419723 8hg6:X (3.44) BS03 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419724 8hg6:X (3.44) BS04 CLA ? GO:0009416 ... Q3B9U7 36951548
    419725 8hg6:X (3.44) BS05 CLA ? GO:0009416 ... Q3B9U7 36951548
    419726 8hg6:X (3.44) BS06 CLA ? GO:0009416 ... Q3B9U7 36951548
    419727 8hg6:X (3.44) BS07 CHL ? GO:0009416 ... Q3B9U7 36951548
    419728 8hg6:X (3.44) BS08 CHL ? GO:0009416 ... Q3B9U7 36951548
    419729 8hg6:X (3.44) BS09 CHL ? GO:0009416 ... Q3B9U7 36951548
    419730 8hg6:X (3.44) BS10 CHL ? GO:0009416 ... Q3B9U7 36951548
    419731 8hg6:X (3.44) BS11 KC2 ? GO:0009416 ... Q3B9U7 36951548
    419732 8hg6:X (3.44) BS12 CLA ? GO:0009416 ... Q3B9U7 36951548
    419733 8hg6:X (3.44) BS13 CLA ? GO:0009416 ... Q3B9U7 36951548
    419734 8hg6:X (3.44) BS14 CLA ? GO:0009416 ... Q3B9U7 36951548
    419735 8hg6:X (3.44) BS15 CLA ? GO:0009416 ... Q3B9U7 36951548
    419736 8hg6:X (3.44) BS16 CHL ? GO:0009416 ... Q3B9U7 36951548
    419737 8hg6:X (3.44) BS17 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419738 8hg6:X (3.44) BS18 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419739 8hg6:X (3.44) BS19 IWJ ? GO:0009416 ... Q3B9U7 36951548
    419740 8hg6:X (3.44) BS20 Q6L ? GO:0009416 ... Q3B9U7 36951548
    419741 8hg7:A (3.1) BS02 LFL ? GO:0000017 ... P31639 38057552
    419742 8hg9:A (2.79) BS01 HEM N/A GO:0004497 ... N/A 36655276
    419743 8hg9:B (2.79) BS01 HEM N/A GO:0004497 ... N/A 36655276
    419744 8hgb:A (1.54) BS01 HEM ? GO:0004497 ... Q2IU02 N/A
    419745 8hgb:A (1.54) BS02 L6X ? GO:0004497 ... Q2IU02 N/A
    419746 8hgc:A (1.72) BS01 HEM ? GO:0004497 ... Q2IU02 36790023
    419747 8hgc:A (1.72) BS02 ANN ? GO:0004497 ... Q2IU02 36790023
    419748 8hgd:B (1.53) BS01 HEM ? GO:0004497 ... A0A368UNN3 N/A
    419749 8hge:B (1.53) BS01 HEM ? GO:0004497 ... A0A368UNN3 N/A
    419750 8hge:B (1.53) BS02 12H ? GO:0004497 ... A0A368UNN3 N/A
    419751 8hgi:A (1.95) BS01 CRQ N/A GO:0006091 ... N/A 37460076
    419752 8hgi:B (1.95) BS01 CRQ N/A GO:0006091 ... N/A 37460076
    419753 8hgk:A (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419754 8hgk:A (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419755 8hgk:B (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419756 8hgk:B (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419757 8hgk:C (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419758 8hgk:C (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419759 8hgk:D (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419760 8hgk:D (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419761 8hgk:E (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419762 8hgk:E (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419763 8hgk:F (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419764 8hgk:F (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419765 8hgk:G (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419766 8hgk:G (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419767 8hgk:H (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419768 8hgk:H (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419769 8hgk:I (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419770 8hgk:I (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419771 8hgk:J (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419772 8hgk:J (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419773 8hgk:K (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419774 8hgk:K (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419775 8hgk:L (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419776 8hgk:L (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419777 8hgk:M (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419778 8hgk:M (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419779 8hgk:N (1.9) BS01 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419780 8hgk:N (1.9) BS02 ZLL 3.4.21.92 GO:0004176 ... Q16740 37923710
    419781 8hgt:A (2.06) BS01 HEM ? GO:0004497 ... A0A368UNN3 36790023
    419782 8hgw:A (2.80001) BS01 1BO ? GO:0003824 ... Q2MHH5 36859434
    419783 8hgw:A (2.80001) BS02 PHT ? GO:0003824 ... Q2MHH5 36859434
    419784 8hgw:B (2.80001) BS01 PHT ? GO:0003824 ... Q2MHH5 36859434
    419785 8hgw:C (2.80001) BS01 PHT ? GO:0003824 ... Q2MHH5 36859434
    419786 8hgw:D (2.80001) BS01 PHT ? GO:0003824 ... Q2MHH5 36859434
    419787 8hh0:A (2.35) BS01 FL3 1.11.1.24 GO:0004601 ... Q5JF30 36888722
    419788 8hh0:B (2.35) BS01 FL3 1.11.1.24 GO:0004601 ... Q5JF30 36888722
    419789 8hh1:A (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    419790 8hh1:B (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    419791 8hh1:C (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    419792 8hh1:D (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    419793 8hh1:E (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    419794 8hh1:F (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    419795 8hh2:A (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    419796 8hh2:B (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    419797 8hh2:C (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    419798 8hh2:D (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 N/A
    419799 8hh2:E (3.0) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    419800 8hh2:F (3.0) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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