Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    196001 8z76:B (1.8) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196002 8z76:C (1.8) BS01 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196003 8z76:C (1.8) BS02 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196004 8z76:C (1.8) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196005 8z77:A (2.0) BS01 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196006 8z77:A (2.0) BS02 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196007 8z77:A (2.0) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196008 8z77:B (2.0) BS01 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196009 8z77:B (2.0) BS02 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196010 8z77:B (2.0) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196011 8z77:C (2.0) BS01 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196012 8z77:C (2.0) BS02 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196013 8z77:C (2.0) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    196014 8z8o:A (1.71) BS01 MG N/A N/A A0A077EWA5 N/A
    196015 8z8o:B (1.71) BS01 MG N/A N/A A0A077EWA5 N/A
    196016 8z8o:C (1.71) BS01 MG N/A N/A A0A077EWA5 N/A
    196017 8z8o:D (1.71) BS01 MG N/A N/A A0A077EWA5 N/A
    196018 8z8p:A (1.68) BS01 MG N/A N/A A0A077EWA5 N/A
    196019 8z8p:B (1.68) BS01 MG N/A N/A A0A077EWA5 N/A
    196020 8z8p:C (1.68) BS01 MG N/A N/A A0A077EWA5 N/A
    196021 8z8p:D (1.68) BS01 MG N/A N/A A0A077EWA5 N/A
    196022 8z8r:A (1.79) BS01 MG N/A N/A A0A077EWA5 N/A
    196023 8z8r:B (1.79) BS01 MG N/A N/A A0A077EWA5 N/A
    196024 8z8r:C (1.79) BS01 MG N/A N/A A0A077EWA5 N/A
    196025 8z8r:D (1.79) BS01 MG N/A N/A A0A077EWA5 N/A
    196026 8z8s:A (1.94) BS01 MG N/A N/A A0A077EWA5 N/A
    196027 8z8s:B (1.94) BS01 MG N/A N/A A0A077EWA5 N/A
    196028 8z99:A (3.2) BS02 ZN N/A N/A N/A 39143216
    196029 8z99:B (3.2) BS03 ZN N/A N/A N/A 39143216
    196030 8z99:C (3.2) BS03 ZN N/A N/A N/A 39143216
    196031 8z99:D (3.2) BS03 ZN N/A N/A N/A 39143216
    196032 8z99:E (3.2) BS03 ZN N/A N/A N/A 39143216
    196033 8z99:F (3.2) BS03 ZN N/A N/A N/A 39143216
    196034 8z99:H (3.2) BS02 ZN N/A N/A N/A 39143216
    196035 8z99:J (3.2) BS03 ZN N/A N/A N/A 39143216
    196036 8z99:P (3.2) BS03 ZN N/A N/A N/A 39143216
    196037 8z9c:A (3.01) BS03 ZN N/A N/A N/A 39143216
    196038 8z9c:B (3.01) BS03 ZN N/A N/A N/A 39143216
    196039 8z9c:C (3.01) BS03 ZN N/A N/A N/A 39143216
    196040 8z9c:D (3.01) BS03 ZN N/A N/A N/A 39143216
    196041 8z9c:E (3.01) BS03 ZN N/A N/A N/A 39143216
    196042 8z9c:F (3.01) BS03 ZN N/A N/A N/A 39143216
    196043 8z9c:G (3.01) BS02 ZN N/A N/A N/A 39143216
    196044 8z9c:H (3.01) BS02 ZN N/A N/A N/A 39143216
    196045 8z9c:J (3.01) BS03 ZN N/A N/A N/A 39143216
    196046 8z9e:B (3.13) BS02 ZN N/A N/A N/A 39143216
    196047 8z9e:C (3.13) BS03 ZN N/A N/A N/A 39143216
    196048 8z9e:D (3.13) BS03 ZN N/A N/A N/A 39143216
    196049 8z9e:E (3.13) BS03 ZN N/A N/A N/A 39143216
    196050 8z9e:F (3.13) BS03 ZN N/A N/A N/A 39143216
    196051 8z9e:H (3.13) BS02 ZN N/A N/A N/A 39143216
    196052 8z9e:J (3.13) BS03 ZN N/A N/A N/A 39143216
    196053 8zb8:A (2.94) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    196054 8zb8:C (2.94) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    196055 8zee:A (2.9) BS04 FE2 N/A GO:0005506 ... P07753 38890314
    196056 8zee:D (2.9) BS08 FE2 N/A GO:0005506 ... P06007 38890314
    196057 8zfw:A (2.18) BS01 MG N/A N/A A0A077EWA5 N/A
    196058 8zfw:B (2.18) BS02 MG N/A N/A A0A077EWA5 N/A
    196059 8zhy:A (2.7) BS01 ZN N/A N/A B7WRJ7 N/A
    196060 8zhy:B (2.7) BS01 MG N/A N/A B7WRJ7 N/A
    196061 8zhy:D (2.7) BS01 ZN N/A N/A B7WRJ7 N/A
    196062 8zhy:D (2.7) BS02 MG N/A N/A B7WRJ7 N/A
    196063 8zi8:A (2.65) BS02 ZN N/A N/A B7WRJ7 N/A
    196064 8zi8:C (2.65) BS01 ZN N/A N/A B7WRJ7 N/A
    196065 8zi8:D (2.65) BS02 ZN N/A N/A B7WRJ7 N/A
    196066 8zj0:B (2.9) BS01 ZN N/A N/A B7WRJ7 N/A
    196067 8zj0:C (2.9) BS01 ZN N/A N/A B7WRJ7 N/A
    196068 8zj0:D (2.9) BS02 ZN N/A N/A B7WRJ7 N/A
    196069 8zj2:D (4.66) BS01 MG N/A GO:0003924 ... P84095 38857861
    196070 8zj3:A (2.9) BS01 ZN N/A N/A B7WRJ7 N/A
    196071 8zj3:A (2.9) BS02 MG N/A N/A B7WRJ7 N/A
    196072 8zj3:A (2.9) BS03 MG N/A N/A B7WRJ7 N/A
    196073 8zj3:B (2.9) BS01 MG N/A N/A B7WRJ7 N/A
    196074 8zj3:C (2.9) BS01 ZN N/A N/A B7WRJ7 N/A
    196075 8zj3:D (2.9) BS01 ZN N/A N/A B7WRJ7 N/A
    196076 8zj5:B (2.8) BS01 ZN N/A N/A B7WRJ7 N/A
    196077 8zj5:C (2.8) BS01 ZN N/A N/A B7WRJ7 N/A
    196078 8zj5:D (2.8) BS01 ZN N/A N/A B7WRJ7 N/A
    196079 8zj7:A (2.65) BS01 MG N/A N/A B7WRJ7 N/A
    196080 8zj7:A (2.65) BS03 ZN N/A N/A B7WRJ7 N/A
    196081 8zj7:C (2.65) BS01 ZN N/A N/A B7WRJ7 N/A
    196082 8zj7:C (2.65) BS02 MG N/A N/A B7WRJ7 N/A
    196083 8zj7:D (2.65) BS01 ZN N/A N/A B7WRJ7 N/A
    196084 8zjf:B (2.7) BS01 MG ? N/A P26010 38781659
    196085 8zjf:B (2.7) BS02 CA ? N/A P26010 38781659
    196086 8zjf:B (2.7) BS03 CA ? N/A P26010 38781659
    196087 8zkc:A (2.85) BS01 MG ? GO:0005524 ... P0AF08 38797154
    196088 8zkd:A (2.05) BS02 MG N/A N/A Q04912 N/A
    196089 8zly:A (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196090 8zly:B (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196091 8zly:C (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196092 8zly:D (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196093 8zly:E (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196094 8zly:F (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196095 8zly:G (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196096 8zly:H (1.89) BS02 MG N/A GO:0004743 ... Q8DQ84 39009072
    196097 8zm4:A (1.4) BS01 ZN 3.4.24.27 N/A P00800 N/A
    196098 8zm4:A (1.4) BS02 CA 3.4.24.27 N/A P00800 N/A
    196099 8zm4:A (1.4) BS03 CA 3.4.24.27 N/A P00800 N/A
    196100 8zm4:A (1.4) BS04 CA 3.4.24.27 N/A P00800 N/A
    196101 8zm4:A (1.4) BS05 CA 3.4.24.27 N/A P00800 N/A
    196102 8zm5:A (1.4) BS03 ZN 3.4.24.27 N/A P00800 N/A
    196103 8zm5:A (1.4) BS04 CA 3.4.24.27 N/A P00800 N/A
    196104 8zm5:A (1.4) BS05 CA 3.4.24.27 N/A P00800 N/A
    196105 8zm5:A (1.4) BS06 CA 3.4.24.27 N/A P00800 N/A
    196106 8zm5:A (1.4) BS07 CA 3.4.24.27 N/A P00800 N/A
    196107 8zm6:A (1.4) BS03 ZN 3.4.24.27 N/A P00800 N/A
    196108 8zm6:A (1.4) BS04 CA 3.4.24.27 N/A P00800 N/A
    196109 8zm6:A (1.4) BS05 CA 3.4.24.27 N/A P00800 N/A
    196110 8zm6:A (1.4) BS06 CA 3.4.24.27 N/A P00800 N/A
    196111 8zm6:A (1.4) BS07 CA 3.4.24.27 N/A P00800 N/A
    196112 8zrz:A (1.26) BS11 CA N/A N/A P36924 N/A
    196113 8zsb:A (3.26) BS01 ZN N/A N/A Q9Y6M5 39111308
    196114 8zsb:B (3.26) BS01 ZN N/A N/A Q9Y6M5 39111308
    196115 8zsz:A (3.59) BS01 ZN N/A N/A Q9Y6M5 39111308
    196116 8zsz:A (3.59) BS02 ZN N/A N/A Q9Y6M5 39111308
    196117 8zsz:A (3.59) BS03 ZN N/A N/A Q9Y6M5 39111308
    196118 8zsz:A (3.59) BS04 ZN N/A N/A Q9Y6M5 39111308
    196119 8zsz:A (3.59) BS05 ZN N/A N/A Q9Y6M5 39111308
    196120 8zsz:B (3.59) BS01 ZN N/A N/A Q9Y6M5 39111308
    196121 8zsz:B (3.59) BS02 ZN N/A N/A Q9Y6M5 39111308
    196122 8zsz:B (3.59) BS03 ZN N/A N/A Q9Y6M5 39111308
    196123 8zsz:B (3.59) BS04 ZN N/A N/A Q9Y6M5 39111308
    196124 8zsz:B (3.59) BS05 ZN N/A N/A Q9Y6M5 39111308
    196125 8zwv:A (1.5) BS02 ZN N/A GO:0002009 ... P00918 N/A
    196126 8zyg:A (1.08) BS01 CU N/A N/A Q9X1H0 N/A
    196127 8zyg:B (1.08) BS01 CU N/A N/A Q9X1H0 N/A
    196128 8zyh:A (1.07) BS01 CU N/A N/A Q9X1H0 N/A
    196129 8zyh:B (1.07) BS01 CU N/A N/A Q9X1H0 N/A
    196130 966c:A (1.9) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 10074939
    196131 966c:A (1.9) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 10074939
    196132 966c:A (1.9) BS03 CA 3.4.24.7 GO:0004222 ... P03956 10074939
    196133 966c:A (1.9) BS04 CA 3.4.24.7 GO:0004222 ... P03956 10074939
    196134 966c:A (1.9) BS05 CA 3.4.24.7 GO:0004222 ... P03956 10074939
    196135 9asb:Q (3.4) BS02 CA ? GO:0004930 ... P41180 38632411
    196136 9asb:Q (3.4) BS03 CA ? GO:0004930 ... P41180 38632411
    196137 9asb:R (3.4) BS02 CA ? GO:0004930 ... P41180 38632411
    196138 9asb:R (3.4) BS03 CA ? GO:0004930 ... P41180 38632411
    196139 9ash:A (2.58) BS05 MG N/A N/A L0CEJ3 38989619
    196140 9ash:A (2.58) BS06 MG N/A N/A L0CEJ3 38989619
    196141 9ash:A (2.58) BS07 MG N/A N/A L0CEJ3 38989619
    196142 9asi:A (2.79) BS04 MG N/A N/A L0CEJ3 38989619
    196143 9asm:A (2.8) BS03 ZN N/A N/A Q9NRR4 N/A
    196144 9asm:A (2.8) BS04 ZN N/A N/A Q9NRR4 N/A
    196145 9asm:A (2.8) BS05 CA N/A N/A Q9NRR4 N/A
    196146 9asm:A (2.8) BS06 CA N/A N/A Q9NRR4 N/A
    196147 9asn:A (3.2) BS03 ZN N/A N/A Q9NRR4 N/A
    196148 9asn:A (3.2) BS04 ZN N/A N/A Q9NRR4 N/A
    196149 9asn:A (3.2) BS05 CA N/A N/A Q9NRR4 N/A
    196150 9asn:A (3.2) BS06 CA N/A N/A Q9NRR4 N/A
    196151 9aso:A (2.9) BS04 ZN N/A N/A Q9NRR4 N/A
    196152 9aso:A (2.9) BS05 ZN N/A N/A Q9NRR4 N/A
    196153 9aso:A (2.9) BS06 CA N/A N/A Q9NRR4 N/A
    196154 9aso:A (2.9) BS07 CA N/A N/A Q9NRR4 N/A
    196155 9asp:A (3.2) BS02 ZN N/A N/A Q9NRR4 N/A
    196156 9asp:A (3.2) BS03 ZN N/A N/A Q9NRR4 N/A
    196157 9asp:A (3.2) BS04 CA N/A N/A Q9NRR4 N/A
    196158 9asq:A (3.0) BS03 ZN N/A N/A Q9NRR4 N/A
    196159 9asq:A (3.0) BS04 ZN N/A N/A Q9NRR4 N/A
    196160 9asq:A (3.0) BS05 CA N/A N/A Q9NRR4 N/A
    196161 9asq:A (3.0) BS06 CA N/A N/A Q9NRR4 N/A
    196162 9atc:B (2.4) BS01 ZN 2.1.3.2 GO:0005515 ... P0A7F3 9829701
    196163 9atn:A (-1.00) BS02 ZN N/A N/A O14686 38849395
    196164 9atn:A (-1.00) BS03 ZN N/A N/A O14686 38849395
    196165 9atn:A (-1.00) BS04 ZN N/A N/A O14686 38849395
    196166 9atn:A (-1.00) BS05 ZN N/A N/A O14686 38849395
    196167 9avg:Q (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    196168 9avg:Q (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    196169 9avg:R (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    196170 9avg:R (3.6) BS04 CA ? GO:0004930 ... P41180 38632411
    196171 9avg:R (3.6) BS05 CA ? GO:0004930 ... P41180 38632411
    196172 9avl:Q (3.8) BS02 CA ? GO:0004930 ... P41180 38632411
    196173 9avl:R (3.8) BS02 CA ? GO:0004930 ... P41180 38632411
    196174 9avl:R (3.8) BS03 CA ? GO:0004930 ... P41180 38632411
    196175 9avt:C (1.5) BS01 ZN N/A N/A Q9NYJ8 N/A
    196176 9avw:C (1.747) BS01 ZN N/A N/A Q9NYJ8 N/A
    196177 9ax6:A (1.65) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38593348
    196178 9ax6:B (1.65) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38593348
    196179 9ax7:3 (2.63) BS02 ZN N/A N/A A0A0E2L017 39222680
    196180 9ax7:4 (2.63) BS02 ZN N/A N/A P0A7N0 39222680
    196181 9ax8:z (2.6) BS04 MG N/A N/A A0A376TVY0 39222680
    196182 9axf:Q (3.5) BS02 CA ? GO:0004930 ... P41180 38632411
    196183 9axf:Q (3.5) BS03 CA ? GO:0004930 ... P41180 38632411
    196184 9axf:Q (3.5) BS04 CA ? GO:0004930 ... P41180 38632411
    196185 9axf:R (3.5) BS02 CA ? GO:0004930 ... P41180 38632411
    196186 9axh:A (2.81) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196187 9axh:B (2.81) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196188 9axh:C (2.81) BS02 MG 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    196189 9axh:D (2.81) BS03 MG 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    196190 9axm:A (2.42) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196191 9axm:B (2.42) BS02 MG 2.7.11.1 GO:0004672 ... P10398 38588399
    196192 9axx:A (2.07) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196193 9axx:C (2.07) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196194 9axy:A (3.6) BS02 MG 2.7.11.1 GO:0004672 ... P15056 38588399
    196195 9axy:B (3.6) BS03 MG 2.7.12.2 GO:0000165 ... Q02750 38588399
    196196 9ay7:A (2.41) BS02 MG 2.7.11.1 GO:0004672 ... P04049 38588399
    196197 9ay7:B (2.41) BS03 MG 2.7.12.2 GO:0000165 ... Q02750 38588399
    196198 9aya:B (2.59) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196199 9aya:D (2.59) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    196200 9ayf:Q (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218