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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    186001 8okg:A (1.45) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186002 8oki:A (3.45) BS02 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    186003 8oki:A (3.45) BS03 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    186004 8oki:A (3.45) BS04 MG 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    186005 8oki:B (3.45) BS02 ZN 2.7.7.6 GO:0000428 ... Q8U0M3 38709902
    186006 8oki:I (3.45) BS01 ZN ? GO:0005515 ... Q8U440 38709902
    186007 8oki:N (3.45) BS01 ZN 2.7.7.6 GO:0000428 ... P60292 38709902
    186008 8oki:P (3.45) BS01 ZN 2.7.7.6 GO:0000428 ... Q8TZI3 38709902
    186009 8okj:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186010 8oko:A (1.25) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186011 8okp:A (1.25) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186012 8okq:A (1.0) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186013 8okt:A (1.5) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186014 8okx:A (3.51) BS01 ZN 2.7.7.86 N/A Q8N884 38418882
    186015 8ol1:K (3.5) BS01 ZN 2.7.7.86 N/A Q8N884 38418882
    186016 8ol9:H (2.6) BS01 CA 3.4.21.22 GO:0004252 ... P00740 37421602
    186017 8ola:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186018 8olb:c (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186019 8olb:c (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186020 8olb:d (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186021 8olb:d (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186022 8olb:e (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186023 8olb:e (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186024 8olb:f (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186025 8olb:f (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186026 8olb:g (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186027 8olb:g (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186028 8olb:h (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186029 8olb:h (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186030 8olb:i (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186031 8olb:i (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186032 8olb:j (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186033 8olb:j (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186034 8olb:k (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186035 8olb:k (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186036 8olb:l (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186037 8olb:l (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186038 8olb:m (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186039 8olb:m (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186040 8olb:n (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186041 8olb:n (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    186042 8olb:o (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    186043 8olc:c (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186044 8olc:c (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186045 8olc:d (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186046 8olc:d (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186047 8olc:e (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186048 8olc:e (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186049 8olc:f (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186050 8olc:f (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186051 8olc:g (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186052 8olc:g (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186053 8olc:h (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186054 8olc:h (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186055 8olc:i (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186056 8olc:i (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186057 8olc:j (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186058 8olc:j (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186059 8olc:k (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186060 8olc:k (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186061 8olc:l (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186062 8olc:l (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186063 8olc:m (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186064 8olc:m (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186065 8olc:n (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    186066 8olc:n (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    186067 8olf:A (1.45) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186068 8oli:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186069 8olk:A (1.27) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186070 8olm:A (1.5) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186071 8olr:G (2.8) BS01 MG ? GO:0000502 ... P21243 38029352
    186072 8olr:I (2.8) BS01 MG ? GO:0000502 ... P25451 38029352
    186073 8olr:K (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 38029352
    186074 8olr:N (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P38624 38029352
    186075 8olr:W (2.8) BS01 MG ? GO:0000502 ... P25451 38029352
    186076 8olr:Y (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 38029352
    186077 8olr:Z (2.8) BS01 MG ? GO:0000502 ... P23724 38029352
    186078 8olt:R (2.84) BS01 ZN ? GO:0001822 ... P52503 37531432
    186079 8om1:R (2.39) BS01 ZN ? GO:0001822 ... P52503 37531432
    186080 8om2:B (2.57) BS02 MG ? GO:0003735 ... P32902 38199006
    186081 8om3:B (2.87) BS02 MG ? GO:0003735 ... P32902 38199006
    186082 8om4:B (2.32) BS02 MG ? GO:0003735 ... P32902 38199006
    186083 8om5:A (3.52) BS02 MG ? GO:0000287 ... P43246 N/A
    186084 8om5:B (3.52) BS02 MG ? GO:0003677 ... P20585 N/A
    186085 8oma:B (3.29) BS03 MG ? GO:0003677 ... P20585 N/A
    186086 8omb:A (1.35) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186087 8omh:A (1.45) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186088 8omm:A (2.15) BS02 FE2 4.99.1.9 GO:0004325 ... A0A3T2BSC5 37743577
    186089 8omn:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186090 8omo:A (3.43) BS02 MG ? GO:0000287 ... P43246 N/A
    186091 8omo:B (3.43) BS03 MG ? GO:0003677 ... P20585 N/A
    186092 8omp:A (1.41) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186093 8omq:A (3.11) BS03 MG ? GO:0000287 ... P43246 N/A
    186094 8omq:B (3.11) BS02 MG ? GO:0003677 ... P20585 N/A
    186095 8omr:A (3.3) BS02 ZN 2.4.2.64 GO:0005515 ... Q9BXR0 38181786
    186096 8omr:B (3.3) BS02 ZN ? GO:0000049 ... Q9H974 38181786
    186097 8omx:X (1.5) BS04 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186098 8omy:X (1.37) BS03 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186099 8omy:X (1.37) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186100 8omy:X (1.37) BS05 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186101 8omy:X (1.37) BS06 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186102 8on0:X (1.29) BS03 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186103 8on0:X (1.29) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186104 8on0:X (1.29) BS05 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186105 8on0:X (1.29) BS06 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186106 8on1:X (1.37) BS03 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186107 8on1:X (1.37) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186108 8on1:X (1.37) BS05 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186109 8on1:X (1.37) BS06 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186110 8on2:X (1.58) BS03 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186111 8on2:X (1.58) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186112 8on2:X (1.58) BS05 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186113 8on2:X (1.58) BS06 FE 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186114 8on3:X (1.74) BS04 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    186115 8one:A (2.3) BS02 FE2 1.14.11.4
    2.4.1.50
    2.4.1.66    		 GO:0001701 ... O60568 37446392
    186116 8one:A (2.3) BS03 FE2 1.14.11.4
    2.4.1.50
    2.4.1.66    		 GO:0001701 ... O60568 37446392
    186117 8one:A (2.3) BS04 MN 1.14.11.4
    2.4.1.50
    2.4.1.66    		 GO:0001701 ... O60568 37446392
    186118 8onx:A (1.3) BS01 MN 3.4.11.18 GO:0006508 ... G0SEA9 38267453
    186119 8onx:A (1.3) BS02 MN 3.4.11.18 GO:0006508 ... G0SEA9 38267453
    186120 8ony:A (2.92) BS02 CO 3.4.11.18 GO:0003723 ... P50579 38267453
    186121 8ony:A (2.92) BS03 CO 3.4.11.18 GO:0003723 ... P50579 38267453
    186122 8oo0:Lg (3.1) BS02 ZN ? GO:0003735 ... G0SFN0 38267453
    186123 8oo0:Lj (3.1) BS03 ZN ? GO:0003723 ... G0S101 38267453
    186124 8oo0:Lm (3.1) BS02 ZN ? GO:0003735 ... A0A2A9PNA8 38267453
    186125 8oo0:Lo (3.1) BS02 ZN ? GO:0003735 ... G0SBZ6 38267453
    186126 8oo0:Lp (3.1) BS02 ZN ? GO:0003735 ... G0S6B0 38267453
    186127 8oo0:Sa (3.1) BS02 ZN ? GO:0003729 ... G0S2X4 38267453
    186128 8oo0:Sb (3.1) BS02 ZN ? GO:0000028 ... G0S1S4 38267453
    186129 8oo0:Sd (3.1) BS02 ZN ? GO:0003735 ... Q2HB68 38267453
    186130 8oo8:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A
    186131 8ood:A (1.497) BS01 MG 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    186132 8ooi:A (2.61) BS03 MG 3.6.4.6 GO:0000502 ... P55072 38326645
    186133 8ooi:B (2.61) BS03 MG 3.6.4.6 GO:0000502 ... P55072 38326645
    186134 8ooi:C (2.61) BS03 MG 3.6.4.6 GO:0000502 ... P55072 38326645
    186135 8ooi:D (2.61) BS03 MG 3.6.4.6 GO:0000502 ... P55072 38326645
    186136 8ooi:E (2.61) BS03 MG 3.6.4.6 GO:0000502 ... P55072 38326645
    186137 8ooi:F (2.61) BS03 MG 3.6.4.6 GO:0000502 ... P55072 38326645
    186138 8ooq:B (2.91) BS01 MG N/A GO:0003824 ... N/A 38243071
    186139 8ooq:J (2.91) BS02 MG N/A GO:0003824 ... N/A 38243071
    186140 8ooq:P (2.91) BS01 MG N/A GO:0003824 ... N/A 38243071
    186141 8ooq:S (2.91) BS01 MG N/A GO:0003824 ... N/A 38243071
    186142 8ooq:T (2.91) BS01 MG N/A GO:0003824 ... N/A 38243071
    186143 8ooq:T (2.91) BS02 MG N/A GO:0003824 ... N/A 38243071
    186144 8ooq:b (2.91) BS01 MG N/A GO:0003824 ... N/A 38243071
    186145 8oow:A (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186146 8oow:B (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186147 8oow:C (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186148 8oow:D (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186149 8oow:E (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186150 8oow:F (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186151 8oow:G (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186152 8oow:H (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186153 8oow:I (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186154 8oow:J (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186155 8oow:K (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186156 8oow:L (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186157 8oox:A (3.09) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186158 8oox:B (3.09) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186159 8ooz:A (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186160 8ooz:B (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186161 8ooz:C (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186162 8ooz:C (2.7) BS03 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186163 8ooz:D (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186164 8ooz:E (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186165 8ooz:F (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186166 8ooz:F (2.7) BS03 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186167 8ooz:G (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186168 8ooz:H (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186169 8ooz:I (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186170 8ooz:J (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186171 8ooz:K (2.7) BS03 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186172 8ooz:L (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    186173 8opr:A (1.811) BS01 CA ? N/A P94217 37923757
    186174 8opr:A (1.811) BS02 CA ? N/A P94217 37923757
    186175 8opr:A (1.811) BS03 CA ? N/A P94217 37923757
    186176 8ops:B (3.82) BS02 ZN N/A GO:0000932 ... Q9H9Z2 39054354
    186177 8opt:A (3.65) BS02 ZN N/A GO:0001556 ... Q5VYS8 39054354
    186178 8opt:B (3.65) BS02 ZN N/A GO:0000932 ... Q9H9Z2 39054354
    186179 8oq9:A (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    186180 8oq9:B (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    186181 8oq9:C (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    186182 8oqh:A (1.76) BS01 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    186183 8oqh:A (1.76) BS02 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    186184 8oqh:B (1.76) BS01 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    186185 8oqh:B (1.76) BS02 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    186186 8oqj:B (1.64) BS01 ZN 2.3.1.12 GO:0016746 ... P06959 38324697
    186187 8or0:B (3.1) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186188 8or0:B (3.1) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186189 8or2:B (3.2) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186190 8or2:B (3.2) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186191 8or2:B (3.2) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186192 8or3:B (2.9) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186193 8or3:B (2.9) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186194 8or3:B (2.9) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 37339624
    186195 8ori:A (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    186196 8ori:B (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    186197 8ori:C (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    186198 8ori:D (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    186199 8orl:A (1.43) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    186200 8orl:B (1.43) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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