Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    185801 8oeq:k (3.3) BS04 MG N/A N/A Q59LS1 N/A
    185802 8oeq:r (3.3) BS03 MG N/A N/A Q5AIB8 N/A
    185803 8oeq:r (3.3) BS04 MG N/A N/A Q5AIB8 N/A
    185804 8oeq:u (3.3) BS02 MG N/A N/A A0A8H6F332 N/A
    185805 8oeq:v (3.3) BS03 MG N/A N/A Q5A6R1 N/A
    185806 8oeq:v (3.3) BS04 MG N/A N/A Q5A6R1 N/A
    185807 8oeq:v (3.3) BS05 MG N/A N/A Q5A6R1 N/A
    185808 8oeq:w (3.3) BS02 MG N/A N/A A0A8H6BZ56 N/A
    185809 8oeq:x (3.3) BS03 MG N/A N/A A0A8H6BUG0 N/A
    185810 8oeq:x (3.3) BS04 MG N/A N/A A0A8H6BUG0 N/A
    185811 8oeq:z (3.3) BS03 MG N/A N/A A0A1D8PK40 N/A
    185812 8oer:A (3.0) BS01 CA ? N/A Q9HC84 N/A
    185813 8oer:A (3.0) BS02 CA ? N/A Q9HC84 N/A
    185814 8oer:B (3.0) BS01 CA ? N/A Q9HC84 N/A
    185815 8oer:B (3.0) BS02 CA ? N/A Q9HC84 N/A
    185816 8oer:C (3.0) BS01 CA ? N/A Q9HC84 N/A
    185817 8oer:D (3.0) BS01 CA ? N/A Q9HC84 N/A
    185818 8oer:I (3.0) BS01 CA ? N/A Q9HC84 N/A
    185819 8oer:J (3.0) BS01 CA ? N/A Q9HC84 N/A
    185820 8oes:A (3.0) BS01 CA ? N/A Q9HC84 N/A
    185821 8oes:A (3.0) BS02 CA ? N/A Q9HC84 N/A
    185822 8oes:A (3.0) BS03 CA ? N/A Q9HC84 N/A
    185823 8oes:B (3.0) BS01 CA ? N/A Q9HC84 N/A
    185824 8oes:B (3.0) BS02 CA ? N/A Q9HC84 N/A
    185825 8oes:B (3.0) BS03 CA ? N/A Q9HC84 N/A
    185826 8oes:C (3.0) BS01 CA ? N/A Q9HC84 N/A
    185827 8oes:C (3.0) BS02 CA ? N/A Q9HC84 N/A
    185828 8oes:C (3.0) BS03 CA ? N/A Q9HC84 N/A
    185829 8oes:D (3.0) BS01 CA ? N/A Q9HC84 N/A
    185830 8oes:D (3.0) BS02 CA ? N/A Q9HC84 N/A
    185831 8oes:D (3.0) BS03 CA ? N/A Q9HC84 N/A
    185832 8oes:E (3.0) BS01 CA ? N/A Q9HC84 N/A
    185833 8oes:E (3.0) BS02 CA ? N/A Q9HC84 N/A
    185834 8oes:F (3.0) BS01 CA ? N/A Q9HC84 N/A
    185835 8oes:F (3.0) BS02 CA ? N/A Q9HC84 N/A
    185836 8oes:G (3.0) BS01 CA ? N/A Q9HC84 N/A
    185837 8oes:H (3.0) BS01 CA ? N/A Q9HC84 N/A
    185838 8oes:I (3.0) BS01 CA ? N/A Q9HC84 N/A
    185839 8oes:J (3.0) BS01 CA ? N/A Q9HC84 N/A
    185840 8oes:K (3.0) BS01 CA ? N/A Q9HC84 N/A
    185841 8oes:L (3.0) BS01 CA ? N/A Q9HC84 N/A
    185842 8oes:M (3.0) BS01 CA ? N/A Q9HC84 N/A
    185843 8oes:N (3.0) BS01 CA ? N/A Q9HC84 N/A
    185844 8oeu:A (3.04) BS04 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185845 8oeu:A (3.04) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185846 8oeu:A (3.04) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185847 8oeu:B (3.04) BS03 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37932450
    185848 8oeu:C (3.04) BS01 ZN ? GO:0000428 ... I3LCH3 37932450
    185849 8oeu:I (3.04) BS01 ZN ? GO:0000428 ... P60899 37932450
    185850 8oeu:I (3.04) BS02 ZN ? GO:0000428 ... P60899 37932450
    185851 8oeu:J (3.04) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37932450
    185852 8oeu:L (3.04) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 37932450
    185853 8oev:A (2.86) BS04 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185854 8oev:A (2.86) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185855 8oev:A (2.86) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185856 8oev:B (2.86) BS03 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37932450
    185857 8oev:C (2.86) BS01 ZN ? GO:0000428 ... I3LCH3 37932450
    185858 8oev:I (2.86) BS01 ZN ? GO:0000428 ... P60899 37932450
    185859 8oev:I (2.86) BS02 ZN ? GO:0000428 ... P60899 37932450
    185860 8oev:J (2.86) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37932450
    185861 8oev:L (2.86) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 37932450
    185862 8oew:A (2.8) BS04 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185863 8oew:A (2.8) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185864 8oew:A (2.8) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185865 8oew:B (2.8) BS03 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37932450
    185866 8oew:C (2.8) BS01 ZN ? GO:0000428 ... I3LCH3 37932450
    185867 8oew:I (2.8) BS01 ZN ? GO:0000428 ... P60899 37932450
    185868 8oew:I (2.8) BS02 ZN ? GO:0000428 ... P60899 37932450
    185869 8oew:J (2.8) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37932450
    185870 8oew:L (2.8) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 37932450
    185871 8of0:A (3.05) BS04 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185872 8of0:A (3.05) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185873 8of0:A (3.05) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37932450
    185874 8of0:B (3.05) BS03 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37932450
    185875 8of0:C (3.05) BS01 ZN ? GO:0000428 ... I3LCH3 37932450
    185876 8of0:I (3.05) BS01 ZN ? GO:0000428 ... P60899 37932450
    185877 8of0:I (3.05) BS02 ZN ? GO:0000428 ... P60899 37932450
    185878 8of0:J (3.05) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37932450
    185879 8of0:L (3.05) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 37932450
    185880 8of4:L (2.94) BS01 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0000122 ... Q8N6T7 38415718
    185881 8of5:A (1.97) BS02 MG 2.7.11.1 GO:0004672 ... O14965 N/A
    185882 8of9:A () BS01 ZN N/A N/A N/A N/A
    185883 8ofb:A (2.39) BS01 ZN 5.6.2.- GO:0003676 ... O51934 37204816
    185884 8ofb:A (2.39) BS02 ZN 5.6.2.- GO:0003676 ... O51934 37204816
    185885 8ofe:A (1.4) BS02 ZN 3.5.1.88 GO:0005515 ... P0A6K3 38057137
    185886 8ofl:A (2.1) BS02 FE2 4.99.1.9 GO:0004325 ... Q8Y565 37743577
    185887 8og2:A (2.47) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    185888 8og2:A (2.47) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    185889 8og2:A (2.47) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    185890 8og2:A (2.47) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    185891 8og4:A (2.1) BS01 MN 2.4.1.223 GO:0000287 ... O43909 37828045
    185892 8og4:B (2.1) BS02 MN 2.4.1.223 GO:0000287 ... O43909 37828045
    185893 8ogc:A (2.09) BS01 MG 2.7.11.1 GO:0016567 ... Q9Y4B6 37465299
    185894 8ogd:A (1.75) BS03 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37068394
    185895 8oge:A (1.46) BS02 CO 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37068394
    185896 8ogf:AAA (1.321) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    185897 8ogg:A (1.76) BS01 FE ? GO:0006826 ... Q7V0T9 38489389
    185898 8ogh:A (1.6) BS02 MG 2.2.1.7 GO:0003824 ... P9WNS3 N/A
    185899 8ogh:B (1.6) BS02 MG 2.2.1.7 GO:0003824 ... P9WNS3 N/A
    185900 8ogi:B (1.547) BS02 CA 1.11.1.7 GO:0004601 ... P11678 38229400
    185901 8oh5:B (3.0) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185902 8oh5:E (3.0) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185903 8oh5:H (3.0) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185904 8oh5:K (3.0) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185905 8oh9:B (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185906 8oh9:E (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185907 8oh9:H (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185908 8oh9:K (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    185909 8ohd:Lg (3.1) BS02 ZN ? GO:0002181 ... P49207 38383785
    185910 8ohd:Lj (3.1) BS03 ZN ? GO:0002181 ... P61927 38383785
    185911 8ohd:Lm (3.1) BS02 ZN ? GO:0002181 ... P62987 38383785
    185912 8ohd:Lo (3.1) BS02 ZN ? GO:0002181 ... P83881 38383785
    185913 8ohd:Lp (3.1) BS02 ZN ? GO:0002181 ... P61513 38383785
    185914 8ohy:A (1.95) BS01 ZN ? GO:0004601 ... Q556V8 37593106
    185915 8ohz:G (2.65) BS01 MG ? GO:0000502 ... P21243 38109686
    185916 8ohz:K (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    185917 8ohz:V (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38109686
    185918 8ohz:Y (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    185919 8ohz:Z (2.65) BS02 MG ? GO:0000502 ... P23724 38109686
    185920 8oi1:G (2.95) BS01 MG ? GO:0000502 ... P21243 38109686
    185921 8oi1:K (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    185922 8oi1:N (2.95) BS01 MG 3.4.25.1 GO:0000502 ... P38624 38109686
    185923 8oi1:V (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38109686
    185924 8oi1:Y (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    185925 8oi1:Z (2.95) BS02 MG ? GO:0000502 ... P23724 38109686
    185926 8oi7:A (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185927 8oi7:A (1.85) BS02 MG ? GO:0005829 ... A2FTT0 37482279
    185928 8oi7:B (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185929 8oi7:B (1.85) BS02 MG ? GO:0005829 ... A2FTT0 37482279
    185930 8oi9:A (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185931 8oi9:A (1.95) BS04 MG ? GO:0005829 ... A2FTT0 37482279
    185932 8oi9:B (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185933 8oi9:B (1.95) BS03 MG ? GO:0005829 ... A2FTT0 37482279
    185934 8oia:A (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185935 8oia:B (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185936 8oia:C (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185937 8oia:D (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185938 8oib:A (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185939 8oib:B (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185940 8oib:C (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185941 8oib:D (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185942 8oic:A (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185943 8oic:B (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185944 8oic:C (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185945 8oic:D (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185946 8oic:E (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185947 8oic:F (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185948 8oic:G (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185949 8oic:H (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    185950 8oin:AO (3.6) BS02 ZN ? GO:0003735 ... Q767K8 37141370
    185951 8oin:Ab (3.6) BS02 MG ? GO:0003735 ... F1S001 37141370
    185952 8oin:BH (3.6) BS02 ZN ? GO:0003735 ... I3LTC4 37141370
    185953 8oin:Bl (3.6) BS02 ZN ? GO:0003735 ... A0A287A731 37141370
    185954 8oin:Bq (3.6) BS02 MG ? GO:0003735 ... A0A8D1BPA5 37141370
    185955 8oip:AO (3.6) BS02 ZN ? GO:0003735 ... Q767K8 37141370
    185956 8oip:Ab (3.6) BS02 MG ? GO:0003735 ... F1S001 37141370
    185957 8oiq:BH (3.5) BS02 ZN ? GO:0003735 ... I3LTC4 37141370
    185958 8oiq:Bl (3.5) BS02 ZN ? GO:0003735 ... A0A287A731 37141370
    185959 8oiq:Bq (3.5) BS02 MG ? GO:0003735 ... A0A8D1BPA5 37141370
    185960 8oir:AO (3.1) BS02 ZN ? GO:0003735 ... Q9Y676 37141370
    185961 8oir:Ab (3.1) BS02 MG ? GO:0003735 ... Q9Y399 37141370
    185962 8oir:Ad (3.1) BS03 MG ? GO:0003723 ... P82675 37141370
    185963 8oir:BH (3.1) BS02 ZN ? GO:0003723 ... Q9BYC8 37141370
    185964 8oir:Bl (3.1) BS02 ZN ? GO:0003735 ... Q9P0J6 37141370
    185965 8ois:AO (3.0) BS02 ZN ? GO:0003735 ... Q9Y676 37141370
    185966 8ois:Ab (3.0) BS02 MG ? GO:0003735 ... Q9Y399 37141370
    185967 8ois:Ad (3.0) BS02 MG ? GO:0003723 ... P82675 37141370
    185968 8oit:BH (2.9) BS02 ZN ? GO:0003723 ... Q9BYC8 37141370
    185969 8oit:Bl (2.9) BS02 ZN ? GO:0003735 ... Q9P0J6 37141370
    185970 8oiz:B (2.5) BS01 ZN ? GO:0005515 ... Q96SW2 37418539
    185971 8oj0:Lg (3.3) BS02 ZN ? GO:0003735 ... A0A6J3FY29 38383785
    185972 8oj0:Lj (3.3) BS03 ZN ? GO:0002181 ... P61927 38383785
    185973 8oj0:Lm (3.3) BS02 ZN ? GO:0002181 ... P62987 38383785
    185974 8oj0:Lo (3.3) BS02 ZN ? GO:0002181 ... P83881 38383785
    185975 8oj0:Lp (3.3) BS02 ZN ? GO:0002181 ... P61513 38383785
    185976 8oj5:Lg (2.9) BS02 ZN ? GO:0002181 ... P49207 38383785
    185977 8oj5:Lj (2.9) BS03 ZN ? GO:0002181 ... P61927 38383785
    185978 8oj5:Lm (2.9) BS02 ZN ? GO:0002181 ... P62987 38383785
    185979 8oj5:Lo (2.9) BS02 ZN ? GO:0002181 ... P83881 38383785
    185980 8oj5:Lp (2.9) BS02 ZN ? GO:0002181 ... P61513 38383785
    185981 8oj6:A (2.41) BS03 MG 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185982 8oj7:A (2.46) BS03 MG 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185983 8oj8:Lg (3.3) BS02 ZN ? GO:0002181 ... P49207 38383785
    185984 8oj8:Lj (3.3) BS03 ZN ? GO:0002181 ... P61927 38383785
    185985 8oj8:Lm (3.3) BS02 ZN ? GO:0002181 ... P62987 38383785
    185986 8oj8:Lo (3.3) BS02 ZN ? GO:0002181 ... P83881 38383785
    185987 8oj8:Lp (3.3) BS02 ZN ? GO:0002181 ... P61513 38383785
    185988 8oja:A (1.87) BS03 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185989 8oja:A (1.87) BS04 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185990 8ojb:A (1.9) BS02 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185991 8ojb:A (1.9) BS03 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185992 8ojc:A (2.08) BS02 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185993 8ojc:A (2.08) BS03 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185994 8ojd:A (2.46) BS03 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    185995 8ojh:B (2.72) BS01 ZN ? GO:0005515 ... Q96SW2 37418539
    185996 8ojm:A (1.8) BS03 MG ? GO:0030246 ... P17931 37658813
    185997 8ojm:A (1.8) BS04 MG ? GO:0030246 ... P17931 37658813
    185998 8ojo:A (1.8) BS01 MG ? GO:0030246 ... P17931 37658813
    185999 8ok9:A (2.5) BS03 MG ? GO:0003676 ... O28951 38197228
    186000 8oke:A (1.05) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218