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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    182601 8hhv:C (1.6) BS01 CA N/A N/A N/A 37726269
    182602 8hhv:D (1.6) BS01 CA N/A N/A N/A 37726269
    182603 8hi7:B (3.25) BS01 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    182604 8hi7:B (3.25) BS02 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    182605 8hi8:B (3.49) BS01 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    182606 8hi8:B (3.49) BS02 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    182607 8hi8:B (3.49) BS03 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    182608 8hic:A (1.6) BS02 CA ? GO:0046872 ... Q7V3V9 37380083
    182609 8hic:A (1.6) BS03 CA ? GO:0046872 ... Q7V3V9 37380083
    182610 8hih:D (3.66) BS03 ZN 2.7.7.6 GO:0000287 ... P9WGY7 37216560
    182611 8hil:A (3.57) BS01 ZN N/A GO:0003677 ... N/A 36893216
    182612 8hil:A (3.57) BS02 MG N/A GO:0003677 ... N/A 36893216
    182613 8hil:C (3.57) BS01 ZN ? GO:0000428 ... A0A0D3D418 36893216
    182614 8hil:I (3.57) BS01 ZN ? GO:0000428 ... A0A3P6GD79 36893216
    182615 8hil:I (3.57) BS02 ZN ? GO:0000428 ... A0A3P6GD79 36893216
    182616 8hil:J (3.57) BS01 ZN ? GO:0000428 ... A0A0D3AAT3 36893216
    182617 8hil:L (3.57) BS01 ZN ? GO:0001054 ... A0A0D2ZPP3 36893216
    182618 8him:A (2.8) BS03 MG N/A GO:0003677 ... N/A 36893216
    182619 8him:A (2.8) BS04 ZN N/A GO:0003677 ... N/A 36893216
    182620 8him:C (2.8) BS01 ZN ? GO:0000428 ... A0A0D3D418 36893216
    182621 8him:I (2.8) BS01 ZN ? GO:0000428 ... A0A3P6GD79 36893216
    182622 8him:J (2.8) BS01 ZN ? GO:0000428 ... A0A0D3AAT3 36893216
    182623 8him:L (2.8) BS01 ZN ? GO:0001054 ... A0A0D2ZPP3 36893216
    182624 8hio:A (3.73) BS02 ZN N/A GO:0003677 ... P0DXB1 37460897
    182625 8hip:A (2.77) BS03 ZN ? GO:0016020 ... Q9GZC8 38664565
    182626 8hip:B (2.77) BS03 ZN ? GO:0016020 ... Q9GZC8 38664565
    182627 8hir:A (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    182628 8hir:A (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182629 8hir:B (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    182630 8hir:B (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182631 8hir:C (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    182632 8hir:C (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182633 8hir:D (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    182634 8hir:D (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182635 8hiu:A (2.99) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    182636 8hiu:B (2.99) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    182637 8hiv:A (2.20003) BS02 FE2 N/A N/A N/A N/A
    182638 8hju:L (2.8) BS07 FE ? GO:0009772 ... A7NQE8 37737710
    182639 8hju:M (2.8) BS05 FE ? GO:0009772 ... A7NQE8 37737710
    182640 8hjv:M (3.1) BS07 FE ? GO:0009772 ... A7NQE8 37737710
    182641 8hjx:A (1.15) BS01 CU ? GO:0046872 ... Q9X1H0 37035687
    182642 8hjx:B (1.15) BS01 CU ? GO:0046872 ... Q9X1H0 37035687
    182643 8hjy:A (1.18) BS01 CU ? GO:0046872 ... Q9X1H0 37035687
    182644 8hjy:B (1.18) BS01 CU ? GO:0046872 ... Q9X1H0 37035687
    182645 8hjz:A (1.22) BS01 CU ? GO:0046872 ... Q9X1H0 37035687
    182646 8hjz:B (1.22) BS01 CU ? GO:0046872 ... Q9X1H0 37035687
    182647 8hk1:6 (2.7) BS01 ZN ? GO:0000398 ... Q7RTV0 36797247
    182648 8hk1:6 (2.7) BS02 ZN ? GO:0000398 ... Q7RTV0 36797247
    182649 8hk1:6 (2.7) BS03 ZN ? GO:0000398 ... Q7RTV0 36797247
    182650 8hk1:C (2.7) BS02 ZN ? GO:0000375 ... Q12874 36797247
    182651 8hk6:A (2.64) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182652 8hk6:B (2.64) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182653 8hk6:C (2.64) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182654 8hk6:D (2.64) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182655 8hkc:F (2.49) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 37238608
    182656 8hkc:F (2.49) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 37238608
    182657 8hkc:F (2.49) BS05 MG 2.7.7.6 GO:0000287 ... P0A8T7 37238608
    182658 8hke:A (3.71) BS03 ZN ? GO:0016020 ... Q9GZC8 38664565
    182659 8hke:B (3.71) BS01 ZN ? GO:0016020 ... Q9GZC8 38664565
    182660 8hkf:A (2.66) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182661 8hkf:B (2.66) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182662 8hkf:C (2.66) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182663 8hkf:D (2.66) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182664 8hkh:A (2.7) BS01 ZN 3.4.24.69 GO:0004222 ... P0DPI1 N/A
    182665 8hkh:B (2.7) BS01 ZN 3.4.24.69 GO:0004222 ... P0DPI1 N/A
    182666 8hkk:A (2.84) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182667 8hkk:A (2.84) BS02 NA ? GO:0006813 ... Q5JUK3 37494189
    182668 8hkk:B (2.84) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182669 8hkk:C (2.84) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182670 8hkk:D (2.84) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182671 8hkm:A (2.95) BS01 ZN ? GO:0006813 ... Q5JUK3 37494189
    182672 8hkm:B (2.95) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182673 8hkm:C (2.95) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182674 8hkm:D (2.95) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182675 8hkq:A (2.9) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182676 8hkq:A (2.9) BS03 NA ? GO:0006813 ... Q5JUK3 37494189
    182677 8hkq:B (2.9) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182678 8hkq:C (2.9) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182679 8hkq:D (2.9) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    182680 8hl8:A (2.5) BS01 MN ? GO:0046872 ... G8HX37 36642179
    182681 8hl8:C (2.5) BS01 MN ? GO:0046872 ... G8HX37 36642179
    182682 8hle:A (1.91) BS01 ZN ? GO:0047869 ... N8X9V6 38030907
    182683 8hle:B (1.91) BS01 ZN ? GO:0047869 ... N8X9V6 38030907
    182684 8hlf:A (1.62) BS01 MN ? GO:0046872 ... Q4FNM4 38030907
    182685 8hlf:B (1.62) BS01 MN ? GO:0046872 ... Q4FNM4 38030907
    182686 8hll:A (2.62) BS01 ZN ? GO:0000976 ... P04637 37463921
    182687 8hlm:A (2.522) BS01 ZN ? GO:0000976 ... P04637 37463921
    182688 8hln:A (2.354) BS01 ZN ? GO:0000976 ... P04637 37463921
    182689 8hlp:A (3.5) BS01 CA ? GO:0002520 ... Q13936 38555290
    182690 8hls:A (2.04) BS01 MG ? N/A B2ULI1 N/A
    182691 8hls:B (2.04) BS01 MG ? N/A B2ULI1 N/A
    182692 8hlw:A (2.5) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 37720100
    182693 8hly:A (2.0) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 37720100
    182694 8hm9:A (1.36) BS01 CU ? GO:0005507 ... P19567 N/A
    182695 8hm9:B (1.36) BS01 CU ? GO:0005507 ... P19567 N/A
    182696 8hma:E (3.4) BS02 CA ? GO:0005216 ... A0A0A0MSA1 38555290
    182697 8hma:E (3.4) BS03 CA ? GO:0005216 ... A0A0A0MSA1 38555290
    182698 8hmb:D (3.3) BS02 CA ? GO:0005216 ... A0A0A0MSA1 38555290
    182699 8hmc:B (3.6) BS01 ZN ? GO:0005930 ... Q22U89 36932088
    182700 8hmd:B (4.7) BS01 ZN ? GO:0005930 ... Q22U89 36932088
    182701 8hme:A (4.2) BS01 ZN ? GO:0030991 ... Q244W3 36932088
    182702 8hme:A (4.2) BS02 ZN ? GO:0030991 ... Q244W3 36932088
    182703 8hmf:A (4.6) BS01 ZN ? GO:0030991 ... Q244W3 36932088
    182704 8hmf:A (4.6) BS02 ZN ? GO:0030991 ... Q244W3 36932088
    182705 8hmg:A (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182706 8hmg:A (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182707 8hmg:A (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182708 8hmg:A (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182709 8hmg:B (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182710 8hmg:B (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182711 8hmg:B (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182712 8hmg:B (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182713 8hmg:C (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182714 8hmg:C (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182715 8hmg:C (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182716 8hmg:C (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182717 8hmg:D (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182718 8hmg:D (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182719 8hmg:D (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182720 8hmg:D (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182721 8hmg:E (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182722 8hmg:E (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182723 8hmg:E (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182724 8hmg:E (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182725 8hmg:F (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182726 8hmg:F (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182727 8hmg:F (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182728 8hmg:F (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182729 8hmg:G (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182730 8hmg:G (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182731 8hmg:G (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182732 8hmg:G (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182733 8hmg:H (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182734 8hmg:H (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182735 8hmg:H (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182736 8hmg:H (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182737 8hmg:I (2.81) BS01 CA 2.3.2.27 N/A Q9LY87 N/A
    182738 8hmg:I (2.81) BS02 CA 2.3.2.27 N/A Q9LY87 N/A
    182739 8hmg:I (2.81) BS03 CA 2.3.2.27 N/A Q9LY87 N/A
    182740 8hmg:I (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    182741 8hmh:A (2.56) BS01 MG 2.3.2.27 N/A Q9LY87 37734561
    182742 8hmh:A (2.56) BS02 MG 2.3.2.27 N/A Q9LY87 37734561
    182743 8hmh:B (2.56) BS01 MG 2.3.2.27 N/A Q9LY87 37734561
    182744 8hmh:B (2.56) BS02 MG 2.3.2.27 N/A Q9LY87 37734561
    182745 8hmo:A (2.53) BS01 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182746 8hmo:A (2.53) BS02 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182747 8hmo:B (2.53) BS01 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182748 8hmo:B (2.53) BS02 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182749 8hmo:C (2.53) BS01 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182750 8hmo:C (2.53) BS02 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182751 8hmo:D (2.53) BS01 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182752 8hmo:D (2.53) BS02 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182753 8hmo:E (2.53) BS01 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182754 8hmo:E (2.53) BS02 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182755 8hmo:F (2.53) BS01 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182756 8hmo:F (2.53) BS02 MN 3.5.1.9 GO:0004061 ... A0A0H4P0S7 N/A
    182757 8hmq:A (2.5) BS02 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182758 8hmq:A (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182759 8hmq:A (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182760 8hmq:B (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182761 8hmq:B (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182762 8hmq:B (2.5) BS05 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182763 8hmq:C (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182764 8hmq:D (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182765 8hmq:D (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182766 8hmr:A (2.6) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182767 8hmr:B (2.6) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182768 8hmr:C (2.6) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182769 8hmr:D (2.6) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182770 8hms:A (2.1) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182771 8hms:A (2.1) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182772 8hms:B (2.1) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182773 8hms:C (2.1) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182774 8hms:D (2.1) BS02 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182775 8hmu:A (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182776 8hmu:A (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182777 8hmu:B (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182778 8hmu:C (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182779 8hmu:C (2.5) BS05 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182780 8hmu:D (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182781 8hmu:D (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    182782 8hn9:A (3.7) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 36896611
    182783 8hn9:B (3.7) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 36896611
    182784 8ho4:A (1.96) BS02 ZN 3.4.24.- GO:0004222 ... Q76NL8 38593807
    182785 8ho5:A (2.003) BS02 ZN 3.4.24.- GO:0004222 ... Q76NL8 38593807
    182786 8how:A (1.79) BS01 CO 1.13.11.27 GO:0003868 ... P93836 36599124
    182787 8hp4:A (2.52) BS02 MG ? GO:0000287 ... C5MDS4 N/A
    182788 8hp4:B (2.52) BS03 MG ? GO:0000287 ... C5MDS4 N/A
    182789 8hpi:A (2.54) BS01 ZN ? GO:0016491 ... A0A8D3X086 N/A
    182790 8hpi:A (2.54) BS02 ZN ? GO:0016491 ... A0A8D3X086 N/A
    182791 8hpi:A (2.54) BS03 ZN ? GO:0016491 ... A0A8D3X086 N/A
    182792 8hpi:B (2.54) BS01 ZN ? GO:0016491 ... A0A8D3X086 N/A
    182793 8hpi:B (2.54) BS02 ZN ? GO:0016491 ... A0A8D3X086 N/A
    182794 8hpi:B (2.54) BS03 ZN ? GO:0016491 ... A0A8D3X086 N/A
    182795 8hpo:F (2.6) BS02 ZN 3.5.1.98 GO:0000082 ... P32561 37081318
    182796 8hpo:G (2.6) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37081318
    182797 8hpr:C (3.75) BS02 MG ? GO:0005524 ... A0R2C0 37619560
    182798 8hpr:D (3.75) BS03 MG ? GO:0005524 ... A0R2C0 37619560
    182799 8hps:C (3.51) BS02 MG ? GO:0005524 ... A0R2C0 37619560
    182800 8hps:D (3.51) BS03 MG ? GO:0005524 ... A0R2C0 37619560
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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