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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    180201 8fqz:A (1.467) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36677947
    180202 8fr1:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36677947
    180203 8fr2:A (1.307) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36677947
    180204 8fr4:A (1.123) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36677947
    180205 8fr9:B (1.5) BS01 MG 3.2.1.14 GO:0004553 ... Q91XA9 37398339
    180206 8frj:A (1.57) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004482 ... P0DTD1
    P41212
    37523415
    180207 8frk:A (1.61) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004482 ... P0DTD1
    P41212
    37523415
    180208 8frr:A (1.27) BS01 CA ? N/A Q99972 38168102
    180209 8fru:j (2.49) BS03 ZN ? GO:0003723 ... V6TG99 38242118
    180210 8fru:m (2.49) BS02 ZN ? GO:0003735 ... A8BXE1 38242118
    180211 8fs3:C (2.93) BS02 MG ? GO:0000077 ... P38629 37205533
    180212 8fs4:C (2.94) BS03 MG ? GO:0000077 ... P38629 37205533
    180213 8fs5:A (2.76) BS04 MG ? GO:0000077 ... P32641 37205533
    180214 8fs5:C (2.76) BS03 MG ? GO:0000077 ... P38629 37205533
    180215 8fs6:A (2.9) BS04 MG ? GO:0000077 ... P32641 37205533
    180216 8fs7:A (2.85) BS04 MG ? GO:0000077 ... P32641 37205533
    180217 8fs8:A (3.04) BS05 MG ? GO:0000077 ... P32641 37205533
    180218 8fs8:C (3.04) BS02 MG ? GO:0000077 ... P38629 37205533
    180219 8fta:A (1.78) BS02 ZN ? GO:0006338 ... Q86U86 N/A
    180220 8ftd:J (2.76) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    180221 8ftd:J (2.76) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    180222 8ftd:J (2.76) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    180223 8ftp:A (1.37) BS01 CA 3.1.1.1 GO:0016020 ... A0A0H2XJL0 37824340
    180224 8ftp:B (1.37) BS01 CA 3.1.1.1 GO:0016020 ... A0A0H2XJL0 37824340
    180225 8ftr:A (2.13) BS02 ZN ? GO:0008168 ... R9UTR3 37709735
    180226 8fts:A (2.2) BS01 ZN ? GO:0008168 ... R9UTR3 37709735
    180227 8ftv:A (2.04) BS02 ZN ? GO:0008168 ... R9UTR3 37709735
    180228 8fty:A (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180229 8fty:B (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180230 8fty:C (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180231 8fty:D (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180232 8fty:E (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180233 8fty:F (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180234 8fty:G (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180235 8fty:H (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    180236 8fu2:A (1.9) BS01 FE2 N/A N/A N/A N/A
    180237 8fu2:B (1.9) BS01 FE2 N/A N/A N/A N/A
    180238 8fu2:C (1.9) BS01 FE2 N/A N/A N/A N/A
    180239 8fu2:D (1.9) BS01 FE2 N/A N/A N/A N/A
    180240 8fu5:A (2.01) BS01 FE2 N/A N/A N/A N/A
    180241 8fu5:B (2.01) BS01 FE2 N/A N/A N/A N/A
    180242 8fu5:C (2.01) BS01 FE2 N/A N/A N/A N/A
    180243 8fu5:D (2.01) BS01 FE2 N/A N/A N/A N/A
    180244 8ful:A (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180245 8ful:B (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180246 8ful:B (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180247 8ful:C (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180248 8ful:D (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180249 8ful:D (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180250 8ful:E (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180251 8ful:F (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180252 8ful:F (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180253 8ful:G (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180254 8ful:H (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180255 8ful:H (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180256 8fum:A (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180257 8fum:B (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180258 8fum:B (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180259 8fum:C (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180260 8fum:D (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180261 8fum:D (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180262 8fum:E (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180263 8fum:F (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180264 8fum:F (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180265 8fum:G (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180266 8fum:H (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180267 8fum:H (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180268 8fun:A (2.24) BS01 MN ? GO:0005737 ... A0A402C2V4 37471626
    180269 8fun:B (2.24) BS01 MN ? GO:0005737 ... A0A402C2Q3 37471626
    180270 8fun:B (2.24) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180271 8fun:C (2.24) BS01 MN ? GO:0005737 ... A0A402C2V4 37471626
    180272 8fun:D (2.24) BS01 MN ? GO:0005737 ... A0A402C2Q3 37471626
    180273 8fun:D (2.24) BS02 MN ? GO:0005737 ... A0A402C2Q3 37471626
    180274 8fuo:A (2.43) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180275 8fuo:B (2.43) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180276 8fuo:B (2.43) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180277 8fuo:C (2.43) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    180278 8fuo:D (2.43) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180279 8fuo:D (2.43) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    180280 8fv3:A (2.1) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    180281 8fv3:B (2.1) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    180282 8fv3:D (2.1) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    180283 8fv4:A (2.2) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    180284 8fv4:C (2.2) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    180285 8fvi:1 (3.24) BS01 ZN ? GO:0003723 ... P12504 37640699
    180286 8fvi:A (3.24) BS03 ZN 3.5.4.38 GO:0000932 ... Q6NTF7 37640699
    180287 8fvj:1 (3.54) BS01 ZN ? GO:0003723 ... P12504 37640699
    180288 8fvj:6 (3.54) BS01 ZN ? GO:0003723 ... P12504 37640699
    180289 8fvr:G (2.42) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    180290 8fvr:G (2.42) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    180291 8fvr:G (2.42) BS06 MG 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    180292 8fvu:A (3.6) BS02 ZN ? GO:0002221 ... Q13075 38177670
    180293 8fvu:A (3.6) BS03 ZN ? GO:0002221 ... Q13075 38177670
    180294 8fvu:A (3.6) BS04 ZN ? GO:0002221 ... Q13075 38177670
    180295 8fvv:A (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    180296 8fvv:A (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    180297 8fvv:B (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    180298 8fvv:B (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    180299 8fvv:C (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    180300 8fvv:C (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    180301 8fvv:D (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    180302 8fvv:D (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    180303 8fvv:E (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    180304 8fvv:E (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    180305 8fvv:F (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    180306 8fvv:F (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    180307 8fvw:G (2.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    180308 8fvw:G (2.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    180309 8fvw:G (2.1) BS07 MG 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    180310 8fvy:a (2.94) BS02 ZN ? GO:0003729 ... A8BQZ7 38242118
    180311 8fw5:D (3.08) BS03 MG 3.6.5.- GO:0000329 ... O74824 37453417
    180312 8fwn:A (1.5) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 N/A
    180313 8fwo:A (1.8) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 N/A
    180314 8fxc:A (3.2) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37648855
    180315 8fxd:5 (1.58) BS01 MN ? GO:0016491 ... Q3JK21 N/A
    180316 8fxd:5 (1.58) BS02 MN ? GO:0016491 ... Q3JK21 N/A
    180317 8fxd:A (1.58) BS01 MN ? GO:0016491 ... Q3JK21 N/A
    180318 8fxd:A (1.58) BS02 MN ? GO:0016491 ... Q3JK21 N/A
    180319 8fxd:B (1.58) BS01 MN ? GO:0016491 ... Q3JK21 N/A
    180320 8fxd:B (1.58) BS02 MN ? GO:0016491 ... Q3JK21 N/A
    180321 8fxd:M (1.58) BS01 MN ? GO:0016491 ... Q3JK21 N/A
    180322 8fxd:M (1.58) BS02 MN ? GO:0016491 ... Q3JK21 N/A
    180323 8fxd:S (1.58) BS01 MN ? GO:0016491 ... Q3JK21 N/A
    180324 8fxd:S (1.58) BS02 MN ? GO:0016491 ... Q3JK21 N/A
    180325 8fxd:Y (1.58) BS01 MN ? GO:0016491 ... Q3JK21 N/A
    180326 8fxd:Y (1.58) BS02 MN ? GO:0016491 ... Q3JK21 N/A
    180327 8fxt:A (1.53) BS08 CA ? GO:0005509 ... P0AEE5 37598249
    180328 8fxu:A (1.59) BS02 CA ? GO:0030246 ... D9TSJ1 37598249
    180329 8fyh:A (3.4) BS01 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180330 8fyh:A (3.4) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180331 8fyh:A (3.4) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180332 8fyh:A (3.4) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180333 8fyh:A (3.4) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180334 8fyh:A (3.4) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180335 8fyh:A (3.4) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180336 8fyh:G (3.4) BS01 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180337 8fyh:G (3.4) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180338 8fyh:G (3.4) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180339 8fyh:G (3.4) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180340 8fyh:G (3.4) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180341 8fyh:G (3.4) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180342 8fyh:G (3.4) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    180343 8fyo:A (1.39) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180344 8fyo:A (1.39) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180345 8fyp:A (1.45) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180346 8fyp:A (1.45) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180347 8fyq:A (1.4) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180348 8fyq:A (1.4) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180349 8fyr:A (1.5) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180350 8fyr:A (1.5) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180351 8fys:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180352 8fys:A (1.8) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    180353 8fz4:A (2.19) BS01 MG ? N/A P58335 37747038
    180354 8fz4:B (2.19) BS01 MG ? N/A P58335 37747038
    180355 8fzd:3 (3.1) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    180356 8fzd:8 (3.1) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180357 8fzd:C (3.1) BS02 MG N/A GO:0000027 ... P60422 39030416
    180358 8fze:3 (3.0) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    180359 8fze:8 (3.0) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180360 8fze:C (3.0) BS02 MG N/A GO:0000027 ... P60422 39030416
    180361 8fze:S (3.0) BS02 MG N/A GO:0000027 ... B7MAS6 39030416
    180362 8fzf:3 (3.2) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    180363 8fzf:8 (3.2) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180364 8fzg:3 (3.1) BS03 ZN N/A GO:0002181 ... P0A7M9 39030416
    180365 8fzg:8 (3.1) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180366 8fzg:C (3.1) BS02 MG N/A GO:0000027 ... P60422 39030416
    180367 8fzh:3 (2.9) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    180368 8fzh:8 (2.9) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180369 8fzh:C (2.9) BS02 MG N/A GO:0000027 ... P60422 39030416
    180370 8fzi:3 (3.1) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    180371 8fzi:8 (3.1) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180372 8fzi:N (3.1) BS02 MG N/A GO:0003735 ... Q1R630 39030416
    180373 8fzj:3 (3.0) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    180374 8fzj:8 (3.0) BS02 ZN N/A GO:0005737 ... A0A0E2L017 39030416
    180375 8fzj:C (3.0) BS03 MG N/A GO:0000027 ... P60422 39030416
    180376 8fzj:C (3.0) BS04 MG N/A GO:0000027 ... P60422 39030416
    180377 8fzj:D (3.0) BS02 MG N/A N/A N/A 39030416
    180378 8fzj:D (3.0) BS03 MG N/A N/A N/A 39030416
    180379 8fzj:V (3.0) BS02 MG N/A N/A N/A 39030416
    180380 8fzk:C (2.1) BS01 MG ? GO:0005737 ... P52292 N/A
    180381 8fzq:A (4.3) BS01 MG 5.6.1.6 GO:0005254 ... P13569 36949202
    180382 8fzq:A (4.3) BS02 MG 5.6.1.6 GO:0005254 ... P13569 36949202
    180383 8fzr:A (3.6) BS02 ZN 2.3.2.8 GO:0004057 ... P16639 37076488
    180384 8fzv:A (3.29) BS01 MG ? GO:0043565 ... P41212
    P58335
    37747038
    180385 8g00:J (3.4) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 37264140
    180386 8g0a:A (2.9) BS02 MG 7.1.2.2 GO:0005524 ... A0R202 37377118
    180387 8g0a:B (2.9) BS02 MG 7.1.2.2 GO:0005524 ... A0R202 37377118
    180388 8g0a:E (2.9) BS02 MG 7.1.2.2 GO:0005524 ... A0R200 37377118
    180389 8g0e:E (2.6) BS02 MG 7.1.2.2 GO:0005524 ... A0R200 37377118
    180390 8g0h:A (3.8) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    180391 8g0h:A (3.8) BS04 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    180392 8g0h:C (3.8) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    180393 8g0h:C (3.8) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    180394 8g10:A (2.47) BS07 MG 2.7.7.86 N/A Q8C6L5 38740774
    180395 8g10:A (2.47) BS08 ZN 2.7.7.86 N/A Q8C6L5 38740774
    180396 8g10:C (2.47) BS07 MG 2.7.7.86 N/A Q8C6L5 38740774
    180397 8g10:C (2.47) BS08 ZN 2.7.7.86 N/A Q8C6L5 38740774
    180398 8g1j:A (2.3) BS07 MG 2.7.7.86 N/A Q8C6L5 38740774
    180399 8g1j:A (2.3) BS08 ZN 2.7.7.86 N/A Q8C6L5 38740774
    180400 8g1j:C (2.3) BS06 MG 2.7.7.86 N/A Q8C6L5 38740774

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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