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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    179201 8fc4:1V (2.45) BS03 MG ? GO:0003723 ... P60492 37452045
    179202 8fc4:1V (2.45) BS04 MG ? GO:0003723 ... P60492 37452045
    179203 8fc4:1W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    179204 8fc4:1W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    179205 8fc4:1W (2.45) BS04 MG ? GO:0003735 ... Q5SHP3 37452045
    179206 8fc4:1Y (2.45) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    179207 8fc4:1b (2.45) BS02 MG ? GO:0003735 ... P80371 37452045
    179208 8fc4:1e (2.45) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    179209 8fc4:1k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    179210 8fc4:1l (2.45) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    179211 8fc4:1m (2.45) BS03 MG ? GO:0000049 ... P80377 37452045
    179212 8fc4:1n (2.45) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    179213 8fc4:1n (2.45) BS03 ZN ? GO:0003735 ... P0DOY6 37452045
    179214 8fc4:1t (2.45) BS02 MG ? GO:0003723 ... P80380 37452045
    179215 8fc4:1y (2.45) BS02 MG ? GO:0005515 ... P0AD49 37452045
    179216 8fc4:20 (2.45) BS03 MG ? GO:0003735 ... P60493 37452045
    179217 8fc4:23 (2.45) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    179218 8fc4:24 (2.45) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    179219 8fc4:25 (2.45) BS02 ZN ? GO:0003735 ... P80339 37452045
    179220 8fc4:26 (2.45) BS02 ZN ? GO:0000049 ... P35871 37452045
    179221 8fc4:27 (2.45) BS02 MG ? GO:0003735 ... P80340 37452045
    179222 8fc4:29 (2.45) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    179223 8fc4:2D (2.45) BS03 MG ? GO:0002181 ... P60405 37452045
    179224 8fc4:2D (2.45) BS04 MG ? GO:0002181 ... P60405 37452045
    179225 8fc4:2D (2.45) BS05 MG ? GO:0002181 ... P60405 37452045
    179226 8fc4:2E (2.45) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    179227 8fc4:2F (2.45) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    179228 8fc4:2F (2.45) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    179229 8fc4:2F (2.45) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    179230 8fc4:2G (2.45) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    179231 8fc4:2Q (2.45) BS03 MG ? GO:0000049 ... P60489 37452045
    179232 8fc4:2Q (2.45) BS04 MG ? GO:0000049 ... P60489 37452045
    179233 8fc4:2W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    179234 8fc4:2W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    179235 8fc4:2Y (2.45) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    179236 8fc4:2f (2.45) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    179237 8fc4:2k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    179238 8fc4:2n (2.45) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    179239 8fc5:10 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    179240 8fc5:10 (2.65) BS04 MG ? GO:0003735 ... P60493 37452045
    179241 8fc5:10 (2.65) BS05 MG ? GO:0003735 ... P60493 37452045
    179242 8fc5:11 (2.65) BS02 MG ? GO:0003735 ... P60494 37452045
    179243 8fc5:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    179244 8fc5:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    179245 8fc5:14 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    179246 8fc5:15 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    179247 8fc5:15 (2.65) BS03 MG ? GO:0003735 ... P80339 37452045
    179248 8fc5:15 (2.65) BS04 ZN ? GO:0003735 ... P80339 37452045
    179249 8fc5:16 (2.65) BS02 ZN ? GO:0000049 ... P35871 37452045
    179250 8fc5:17 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    179251 8fc5:17 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    179252 8fc5:17 (2.65) BS04 MG ? GO:0003735 ... P80340 37452045
    179253 8fc5:17 (2.65) BS05 MG ? GO:0003735 ... P80340 37452045
    179254 8fc5:18 (2.65) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    179255 8fc5:18 (2.65) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    179256 8fc5:19 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    179257 8fc5:1D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    179258 8fc5:1D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    179259 8fc5:1D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    179260 8fc5:1D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    179261 8fc5:1D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    179262 8fc5:1D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    179263 8fc5:1D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    179264 8fc5:1D (2.65) BS10 MG ? GO:0002181 ... P60405 37452045
    179265 8fc5:1D (2.65) BS11 MG ? GO:0002181 ... P60405 37452045
    179266 8fc5:1D (2.65) BS12 MG ? GO:0002181 ... P60405 37452045
    179267 8fc5:1E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    179268 8fc5:1E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    179269 8fc5:1E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    179270 8fc5:1E (2.65) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    179271 8fc5:1F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    179272 8fc5:1F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    179273 8fc5:1F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    179274 8fc5:1F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    179275 8fc5:1F (2.65) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    179276 8fc5:1F (2.65) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    179277 8fc5:1F (2.65) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    179278 8fc5:1F (2.65) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    179279 8fc5:1F (2.65) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    179280 8fc5:1F (2.65) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    179281 8fc5:1F (2.65) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    179282 8fc5:1F (2.65) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    179283 8fc5:1F (2.65) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    179284 8fc5:1F (2.65) BS15 MG ? GO:0003735 ... Q5SHN9 37452045
    179285 8fc5:1G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    179286 8fc5:1G (2.65) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    179287 8fc5:1N (2.65) BS02 MG ? GO:0003729 ... P60488 37452045
    179288 8fc5:1N (2.65) BS03 MG ? GO:0003729 ... P60488 37452045
    179289 8fc5:1P (2.65) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    179290 8fc5:1P (2.65) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    179291 8fc5:1P (2.65) BS04 MG ? GO:0003735 ... Q5SHQ7 37452045
    179292 8fc5:1Q (2.65) BS03 MG ? GO:0000049 ... P60489 37452045
    179293 8fc5:1Q (2.65) BS04 MG ? GO:0000049 ... P60489 37452045
    179294 8fc5:1Q (2.65) BS05 MG ? GO:0000049 ... P60489 37452045
    179295 8fc5:1R (2.65) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    179296 8fc5:1R (2.65) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    179297 8fc5:1R (2.65) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    179298 8fc5:1R (2.65) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    179299 8fc5:1T (2.65) BS03 MG ? GO:0003735 ... P60490 37452045
    179300 8fc5:1U (2.65) BS02 MG ? GO:0000027 ... P60491 37452045
    179301 8fc5:1U (2.65) BS03 MG ? GO:0000027 ... P60491 37452045
    179302 8fc5:1U (2.65) BS04 MG ? GO:0000027 ... P60491 37452045
    179303 8fc5:1U (2.65) BS05 MG ? GO:0000027 ... P60491 37452045
    179304 8fc5:1U (2.65) BS06 MG ? GO:0000027 ... P60491 37452045
    179305 8fc5:1U (2.65) BS07 MG ? GO:0000027 ... P60491 37452045
    179306 8fc5:1V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    179307 8fc5:1V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    179308 8fc5:1V (2.65) BS04 MG ? GO:0003723 ... P60492 37452045
    179309 8fc5:1W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    179310 8fc5:1Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    179311 8fc5:1b (2.65) BS02 MG ? GO:0003735 ... P80371 37452045
    179312 8fc5:1e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    179313 8fc5:1k (2.65) BS02 MG ? GO:0003735 ... P80376 37452045
    179314 8fc5:1l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    179315 8fc5:1m (2.65) BS03 MG ? GO:0000049 ... P80377 37452045
    179316 8fc5:1n (2.65) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    179317 8fc5:1n (2.65) BS03 ZN ? GO:0003735 ... P0DOY6 37452045
    179318 8fc5:1t (2.65) BS02 MG ? GO:0003723 ... P80380 37452045
    179319 8fc5:1y (2.65) BS02 MG ? GO:0005515 ... P0AD49 37452045
    179320 8fc5:20 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    179321 8fc5:23 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    179322 8fc5:24 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    179323 8fc5:25 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    179324 8fc5:25 (2.65) BS03 ZN ? GO:0003735 ... P80339 37452045
    179325 8fc5:26 (2.65) BS02 ZN ? GO:0000049 ... P35871 37452045
    179326 8fc5:27 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    179327 8fc5:27 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    179328 8fc5:29 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    179329 8fc5:2D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    179330 8fc5:2D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    179331 8fc5:2D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    179332 8fc5:2D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    179333 8fc5:2D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    179334 8fc5:2D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    179335 8fc5:2D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    179336 8fc5:2E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    179337 8fc5:2E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    179338 8fc5:2F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    179339 8fc5:2F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    179340 8fc5:2F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    179341 8fc5:2F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    179342 8fc5:2G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    179343 8fc5:2Q (2.65) BS03 MG ? GO:0000049 ... P60489 37452045
    179344 8fc5:2V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    179345 8fc5:2V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    179346 8fc5:2W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    179347 8fc5:2W (2.65) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    179348 8fc5:2Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    179349 8fc5:2f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    179350 8fc5:2k (2.65) BS02 MG ? GO:0003735 ... P80376 37452045
    179351 8fc5:2l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    179352 8fc5:2n (2.65) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    179353 8fc5:2t (2.65) BS02 MG ? GO:0003723 ... P80380 37452045
    179354 8fc6:10 (2.35) BS03 MG ? GO:0003735 ... P60493 37452045
    179355 8fc6:10 (2.35) BS04 MG ? GO:0003735 ... P60493 37452045
    179356 8fc6:11 (2.35) BS02 MG ? GO:0003735 ... P60494 37452045
    179357 8fc6:13 (2.35) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    179358 8fc6:13 (2.35) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    179359 8fc6:13 (2.35) BS05 MG ? GO:0003735 ... Q5SHQ6 37452045
    179360 8fc6:14 (2.35) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    179361 8fc6:15 (2.35) BS02 MG ? GO:0003735 ... P80339 37452045
    179362 8fc6:15 (2.35) BS03 MG ? GO:0003735 ... P80339 37452045
    179363 8fc6:15 (2.35) BS04 ZN ? GO:0003735 ... P80339 37452045
    179364 8fc6:16 (2.35) BS02 ZN ? GO:0000049 ... P35871 37452045
    179365 8fc6:17 (2.35) BS02 MG ? GO:0003735 ... P80340 37452045
    179366 8fc6:17 (2.35) BS03 MG ? GO:0003735 ... P80340 37452045
    179367 8fc6:17 (2.35) BS04 MG ? GO:0003735 ... P80340 37452045
    179368 8fc6:17 (2.35) BS05 MG ? GO:0003735 ... P80340 37452045
    179369 8fc6:18 (2.35) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    179370 8fc6:18 (2.35) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    179371 8fc6:19 (2.35) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    179372 8fc6:1D (2.35) BS03 MG ? GO:0002181 ... P60405 37452045
    179373 8fc6:1D (2.35) BS04 MG ? GO:0002181 ... P60405 37452045
    179374 8fc6:1D (2.35) BS05 MG ? GO:0002181 ... P60405 37452045
    179375 8fc6:1D (2.35) BS06 MG ? GO:0002181 ... P60405 37452045
    179376 8fc6:1D (2.35) BS07 MG ? GO:0002181 ... P60405 37452045
    179377 8fc6:1D (2.35) BS08 MG ? GO:0002181 ... P60405 37452045
    179378 8fc6:1D (2.35) BS09 MG ? GO:0002181 ... P60405 37452045
    179379 8fc6:1D (2.35) BS10 MG ? GO:0002181 ... P60405 37452045
    179380 8fc6:1D (2.35) BS11 MG ? GO:0002181 ... P60405 37452045
    179381 8fc6:1E (2.35) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    179382 8fc6:1E (2.35) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    179383 8fc6:1E (2.35) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    179384 8fc6:1E (2.35) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    179385 8fc6:1F (2.35) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    179386 8fc6:1F (2.35) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    179387 8fc6:1F (2.35) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    179388 8fc6:1F (2.35) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    179389 8fc6:1F (2.35) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    179390 8fc6:1F (2.35) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    179391 8fc6:1F (2.35) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    179392 8fc6:1F (2.35) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    179393 8fc6:1F (2.35) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    179394 8fc6:1F (2.35) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    179395 8fc6:1F (2.35) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    179396 8fc6:1F (2.35) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    179397 8fc6:1F (2.35) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    179398 8fc6:1G (2.35) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    179399 8fc6:1G (2.35) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    179400 8fc6:1N (2.35) BS02 MG ? GO:0003729 ... P60488 37452045
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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