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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    178401 8evs:AC (2.62) BS03 MG ? GO:0003735 ... N/A 37595043
    178402 8evs:AN (2.62) BS03 MG ? GO:0002181 ... P05748 37595043
    178403 8evs:Ae (2.62) BS02 MG ? GO:0003735 ... N/A 37595043
    178404 8evs:Ae (2.62) BS03 MG ? GO:0003735 ... N/A 37595043
    178405 8evs:Af (2.62) BS02 MG ? GO:0000027 ... P05744 37595043
    178406 8evs:Ah (2.62) BS03 MG ? GO:0000463 ... P0CX84 37595043
    178407 8evs:Aj (2.62) BS03 MG ? GO:0000448 ... P49166 37595043
    178408 8evs:Ao (2.62) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    178409 8evt:AB (2.2) BS02 MG ? GO:0000027 ... P14126 37595043
    178410 8evt:AC (2.2) BS03 MG ? GO:0003735 ... N/A 37595043
    178411 8evt:AN (2.2) BS03 MG ? GO:0002181 ... P05748 37595043
    178412 8evt:AN (2.2) BS04 MG ? GO:0002181 ... P05748 37595043
    178413 8evt:AO (2.2) BS02 MG ? GO:0000470 ... P26784 37595043
    178414 8evt:Ae (2.2) BS02 MG ? GO:0003735 ... N/A 37595043
    178415 8evt:Af (2.2) BS02 MG ? GO:0000027 ... P05744 37595043
    178416 8evt:Af (2.2) BS03 MG ? GO:0000027 ... P05744 37595043
    178417 8evt:Aj (2.2) BS03 MG ? GO:0000448 ... P49166 37595043
    178418 8evt:Al (2.2) BS03 MG ? GO:0002181 ... P04650 37595043
    178419 8evt:Ao (2.2) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    178420 8evt:BF (2.2) BS12 MG ? GO:0000028 ... A0A1L4AA68 37595043
    178421 8evt:BN (2.2) BS03 MG ? GO:0000462 ... P05756 37595043
    178422 8evw:A (1.22) BS04 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178423 8evw:A (1.22) BS05 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178424 8evw:B (1.22) BS04 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178425 8evw:B (1.22) BS05 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178426 8evx:A (1.55) BS03 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178427 8evx:A (1.55) BS04 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178428 8evx:B (1.55) BS03 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178429 8evx:B (1.55) BS04 MG 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    178430 8evy:A (2.35) BS03 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178431 8evy:A (2.35) BS04 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178432 8evy:B (2.35) BS03 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178433 8evy:B (2.35) BS04 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178434 8evy:C (2.35) BS03 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178435 8evy:C (2.35) BS04 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178436 8evz:A (2.45) BS01 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178437 8evz:A (2.45) BS02 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178438 8evz:B (2.45) BS01 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178439 8evz:B (2.45) BS02 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178440 8evz:C (2.45) BS01 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178441 8evz:C (2.45) BS02 MG 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    178442 8ew1:A (1.8) BS03 CA ? GO:0004553 ... B5CYA6 N/A
    178443 8ew1:B (1.8) BS03 CA ? GO:0004553 ... B5CYA6 N/A
    178444 8ew1:C (1.8) BS03 CA ? GO:0004553 ... B5CYA6 N/A
    178445 8ew4:A (2.4) BS01 CO ? GO:0003677 ... P02768 37325156
    178446 8ew7:A (3.3) BS01 CO ? GO:0003677 ... P02768 37325156
    178447 8ew7:A (3.3) BS02 CO ? GO:0003677 ... P02768 37325156
    178448 8ew7:A (3.3) BS03 CO ? GO:0003677 ... P02768 37325156
    178449 8ew7:A (3.3) BS04 CO ? GO:0003677 ... P02768 37325156
    178450 8ewb:Ao (2.87) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    178451 8ewc:AA (2.45) BS02 MG ? GO:0002181 ... P0CX45 37595043
    178452 8ewc:AB (2.45) BS02 MG ? GO:0000027 ... P14126 37595043
    178453 8ewc:AN (2.45) BS03 MG ? GO:0002181 ... P05748 37595043
    178454 8ewc:Ae (2.45) BS02 MG ? GO:0003735 ... N/A 37595043
    178455 8ewc:Af (2.45) BS02 MG ? GO:0000027 ... P05744 37595043
    178456 8ewc:Aj (2.45) BS03 MG ? GO:0000448 ... P49166 37595043
    178457 8ewc:Ao (2.45) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    178458 8ewi:A (3.5) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178459 8ewi:A (3.5) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178460 8ewi:A (3.5) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178461 8ewi:B (3.5) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178462 8ewi:B (3.5) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178463 8ewi:B (3.5) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178464 8ewi:C (3.5) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178465 8ewi:C (3.5) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178466 8ewi:C (3.5) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178467 8ewi:D (3.5) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178468 8ewi:D (3.5) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178469 8ewi:D (3.5) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    178470 8ewo:A (2.47) BS01 ZN 3.1.2.6 GO:0004416 ... Q9I2T1 N/A
    178471 8ewo:A (2.47) BS02 ZN 3.1.2.6 GO:0004416 ... Q9I2T1 N/A
    178472 8ewo:B (2.47) BS01 ZN 3.1.2.6 GO:0004416 ... Q9I2T1 N/A
    178473 8ewo:B (2.47) BS02 ZN 3.1.2.6 GO:0004416 ... Q9I2T1 N/A
    178474 8ewo:C (2.47) BS01 ZN 3.1.2.6 GO:0004416 ... Q9I2T1 N/A
    178475 8ewo:C (2.47) BS02 ZN 3.1.2.6 GO:0004416 ... Q9I2T1 N/A
    178476 8ewz:A (1.75) BS02 ZN 3.4.11.- GO:0006508 ... O96935 36634455
    178477 8ex3:A (1.6) BS01 ZN 3.4.11.- GO:0006508 ... O96935 36634455
    178478 8exc:A (1.9) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36735827
    178479 8exg:A (1.99) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36735827
    178480 8exp:A (4.2) BS01 ZN ? GO:0005886 ... P18357 36599987
    178481 8exp:B (4.2) BS01 ZN ? GO:0005886 ... P18357 36599987
    178482 8exq:A (4.9) BS01 ZN ? GO:0005886 ... P18357 36599987
    178483 8exq:B (4.9) BS01 ZN ? GO:0005886 ... P18357 36599987
    178484 8exr:A (3.8) BS01 ZN ? GO:0005886 ... P18357 36599987
    178485 8exr:B (3.8) BS01 ZN ? GO:0005886 ... P18357 36599987
    178486 8exs:A (4.3) BS01 ZN ? GO:0005886 ... P18357 36599987
    178487 8exs:B (4.3) BS01 ZN ? GO:0005886 ... P18357 36599987
    178488 8ext:A (4.6) BS01 ZN ? GO:0005886 ... P18357 36599987
    178489 8ext:B (4.6) BS01 ZN ? GO:0005886 ... P18357 36599987
    178490 8exw:A (2.5) BS01 MG ? GO:0003774 ... P05661 N/A
    178491 8exx:A (3.3) BS03 MG N/A N/A H9E937 39197451
    178492 8exx:A (3.3) BS04 MG N/A N/A H9E937 39197451
    178493 8exy:D (3.2) BS04 MG 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    178494 8exy:D (3.2) BS05 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    178495 8exy:D (3.2) BS06 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    178496 8ey3:A (1.0) BS01 FE ? GO:0046872 ... A0A1Y2XHL0 N/A
    178497 8ey4:I (1.83) BS01 FE ? GO:0046872 ... A0A1Y2XHL0 N/A
    178498 8ey5:A (3.1) BS01 CO ? GO:0003677 ... P02768 37325156
    178499 8ey5:A (3.1) BS02 CO ? GO:0003677 ... P02768 37325156
    178500 8ey5:A (3.1) BS03 CO ? GO:0003677 ... P02768 37325156
    178501 8eyd:A (1.83) BS02 ZN 3.4.11.- GO:0006508 ... O96935 36634455
    178502 8eye:A (1.83) BS02 ZN 3.4.11.- GO:0006508 ... O96935 36634455
    178503 8eyf:A (1.9) BS02 ZN 3.4.11.- GO:0006508 ... O96935 36634455
    178504 8eyl:A (1.18) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36735827
    178505 8ez2:A (1.83) BS02 ZN 3.4.11.- GO:0006508 ... O96935 36634455
    178506 8ez4:A (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178507 8ez4:A (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178508 8ez4:B (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178509 8ez4:B (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178510 8ez4:C (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178511 8ez4:C (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178512 8ez4:D (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178513 8ez4:D (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178514 8ez4:E (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178515 8ez4:E (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178516 8ez4:F (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178517 8ez4:F (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178518 8ez4:G (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178519 8ez4:G (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178520 8ez4:H (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178521 8ez4:H (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178522 8ez4:I (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178523 8ez4:I (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178524 8ez4:J (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178525 8ez4:J (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178526 8ez4:K (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178527 8ez4:K (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178528 8ez4:L (1.89) BS03 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178529 8ez4:L (1.89) BS04 ZN 3.4.11.1
    3.4.13.-
    GO:0005737 ... Q8IL11 36634455
    178530 8ez5:A (2.09) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178531 8ez5:D (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178532 8ez5:a (2.09) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178533 8ez5:d (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178534 8ezb:C (8.9) BS03 MG 2.7.11.1 GO:0000460 ... P78527 37256947
    178535 8ezb:L (8.9) BS03 MG 2.7.11.1 GO:0000460 ... P78527 37256947
    178536 8ezf:B (2.15) BS01 CA 5.1.2.1 GO:0016853 ... F9USS9 37886035
    178537 8ezh:B (1.99) BS02 CA 5.1.2.1 GO:0016853 ... F9USS9 37886035
    178538 8ezh:B (1.99) BS03 MG 5.1.2.1 GO:0016853 ... F9USS9 37886035
    178539 8ezi:B (1.99) BS03 CA 5.1.2.1 GO:0016853 ... F9USS9 37886035
    178540 8ezi:B (1.99) BS04 MG 5.1.2.1 GO:0016853 ... F9USS9 37886035
    178541 8f05:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36876431
    178542 8f06:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36876431
    178543 8f07:A (1.05) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36876431
    178544 8f0v:A (2.951) BS01 ZN ? GO:0046872 ... Q6SVB5 37384723
    178545 8f0v:A (2.951) BS02 ZN ? GO:0046872 ... Q6SVB5 37384723
    178546 8f0v:A (2.951) BS03 ZN ? GO:0046872 ... Q6SVB5 37384723
    178547 8f18:A (3.2) BS01 MG 3.6.5.- GO:0000226 ... Q2XVP4 37726093
    178548 8f1b:A (2.41) BS01 ZN ? N/A Q9KP27 36613986
    178549 8f1b:A (2.41) BS02 ZN ? N/A Q9KP27 36613986
    178550 8f1b:A (2.41) BS03 ZN ? N/A Q9KP27 36613986
    178551 8f1b:B (2.41) BS01 ZN ? N/A Q9KP27 36613986
    178552 8f1b:B (2.41) BS02 ZN ? N/A Q9KP27 36613986
    178553 8f1b:B (2.41) BS03 ZN ? N/A Q9KP27 36613986
    178554 8f1b:C (2.41) BS01 ZN ? N/A Q9KP27 36613986
    178555 8f1b:C (2.41) BS02 ZN ? N/A Q9KP27 36613986
    178556 8f1b:C (2.41) BS03 ZN ? N/A Q9KP27 36613986
    178557 8f1b:C (2.41) BS04 ZN ? N/A Q9KP27 36613986
    178558 8f1b:D (2.41) BS01 ZN ? N/A Q9KP27 36613986
    178559 8f1b:D (2.41) BS02 ZN ? N/A Q9KP27 36613986
    178560 8f1b:D (2.41) BS03 ZN ? N/A Q9KP27 36613986
    178561 8f1b:D (2.41) BS04 ZN ? N/A Q9KP27 36613986
    178562 8f1b:E (2.41) BS01 ZN ? N/A Q9KP27 36613986
    178563 8f1b:E (2.41) BS02 ZN ? N/A Q9KP27 36613986
    178564 8f1b:E (2.41) BS03 ZN ? N/A Q9KP27 36613986
    178565 8f1b:F (2.41) BS01 ZN ? N/A Q9KP27 36613986
    178566 8f1b:F (2.41) BS02 ZN ? N/A Q9KP27 36613986
    178567 8f1b:F (2.41) BS03 ZN ? N/A Q9KP27 36613986
    178568 8f1c:A (2.92) BS01 ZN ? GO:0001508 ... P48547 37812700
    178569 8f1c:B (2.92) BS01 ZN ? GO:0001508 ... P48547 37812700
    178570 8f1c:C (2.92) BS01 ZN ? GO:0001508 ... P48547 37812700
    178571 8f1c:D (2.92) BS01 ZN ? GO:0001508 ... P48547 37812700
    178572 8f1d:A (2.94) BS01 ZN ? GO:0001508 ... P48547 37812700
    178573 8f1d:B (2.94) BS01 ZN ? GO:0001508 ... P48547 37812700
    178574 8f1d:C (2.94) BS01 ZN ? GO:0001508 ... P48547 37812700
    178575 8f1d:D (2.94) BS01 ZN ? GO:0001508 ... P48547 37812700
    178576 8f1e:D (3.28) BS01 MG ? GO:0003924 ... P32835 37450495
    178577 8f1i:J (3.0) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178578 8f1i:J (3.0) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178579 8f1i:J (3.0) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178580 8f1j:J (2.6) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178581 8f1j:J (2.6) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178582 8f1j:J (2.6) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178583 8f1k:J (2.8) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178584 8f1k:J (2.8) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178585 8f1k:J (2.8) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36972428
    178586 8f29:B (4.0) BS02 MG ? GO:0005524 ... P07251 38316880
    178587 8f39:A (3.5) BS02 MG ? GO:0005524 ... P07251 38316880
    178588 8f3c:J (3.4) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 37264140
    178589 8f4c:A (2.0) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178590 8f4c:D (2.0) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178591 8f4c:a (2.0) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178592 8f4c:d (2.0) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178593 8f4d:A (2.15) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178594 8f4d:D (2.15) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178595 8f4d:a (2.15) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178596 8f4d:d (2.15) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178597 8f4e:A (2.09) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178598 8f4e:D (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    178599 8f4e:a (2.09) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    178600 8f4e:d (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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